RNA–Protein interactions for RNA: ENST00000536723.5

USP30-209, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-209ENST00000536723 CCNB3Q8WWL7 1395 aa30.62■■■□□ 2.49
USP30-209ENST00000536723 ALKQ9UM73 1620 aa30.62■■■□□ 2.49
USP30-209ENST00000536723 POLR1AO95602 1720 aaPredicted RBP30.61■■■□□ 2.49
USP30-209ENST00000536723 VWDEQ8N2E2 1590 aa30.6■■■□□ 2.49
USP30-209ENST00000536723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.6■■■□□ 2.49
USP30-209ENST00000536723 ADGBQ8N7X0 1667 aa30.59■■■□□ 2.49
USP30-209ENST00000536723 ZNF644Q9H582 1327 aaPredicted RBP30.59■■■□□ 2.49
USP30-209ENST00000536723 SENP3Q9H4L4 574 aaPredicted RBP30.59■■■□□ 2.49
USP30-209ENST00000536723 DHX29Q7Z478 1369 aaKnown RBP30.56■■■□□ 2.48
USP30-209ENST00000536723 THEMISQ8N1K5 641 aaPredicted RBP30.56■■■□□ 2.48
USP30-209ENST00000536723 KIF3BO15066 747 aa30.54■■■□□ 2.48
USP30-209ENST00000536723 NPHP4O75161 1426 aaPredicted RBP30.54■■■□□ 2.48
USP30-209ENST00000536723 PZPP20742 1482 aa30.53■■■□□ 2.48
USP30-209ENST00000536723 MBD5Q9P267 1494 aa30.52■■■□□ 2.48
USP30-209ENST00000536723 RTEL1-TNFRSF6BF6WH68 1400 aa30.51■■■□□ 2.47
USP30-209ENST00000536723 MED14O60244 1454 aa30.5■■■□□ 2.47
USP30-209ENST00000536723 MIA2Q96PC5 1412 aa30.49■■■□□ 2.47
USP30-209ENST00000536723 WASHC2CQ9Y4E1 1318 aa30.48■■■□□ 2.47
USP30-209ENST00000536723 RGS17Q9UGC6 210 aaPredicted RBP30.47■■■□□ 2.47
USP30-209ENST00000536723 MTUS2Q5JR59 1369 aa30.46■■■□□ 2.47
USP30-209ENST00000536723 KDM5DQ9BY66 1539 aa30.46■■■□□ 2.47
USP30-209ENST00000536723 UGGT1Q9NYU2 1555 aa30.45■■■□□ 2.46
USP30-209ENST00000536723 NLRP1Q9C000 1473 aa30.44■■■□□ 2.46
USP30-209ENST00000536723 LRRC7Q96NW7 1537 aa30.44■■■□□ 2.46
USP30-209ENST00000536723 FAM135AQ9P2D6 1515 aa30.44■■■□□ 2.46
USP30-209ENST00000536723 DEPDC5O75140 1603 aa30.43■■■□□ 2.46
USP30-209ENST00000536723 CHIC1Q5VXU3 224 aa30.41■■■□□ 2.46
USP30-209ENST00000536723 TIAM1Q13009 1591 aa30.38■■■□□ 2.45
USP30-209ENST00000536723 STRCP1A6NGW2 1772 aa30.37■■■□□ 2.45
USP30-209ENST00000536723 IQGAP1P46940 1657 aa30.36■■■□□ 2.45
USP30-209ENST00000536723 RNF17Q9BXT8 1623 aaKnown RBP30.33■■■□□ 2.45
USP30-209ENST00000536723 CCDC141Q6ZP82 1450 aa30.3■■■□□ 2.44
USP30-209ENST00000536723 SYNMO15061 1565 aa30.28■■■□□ 2.44
USP30-209ENST00000536723 RSPH4AQ5TD94 716 aa30.27■■■□□ 2.44
USP30-209ENST00000536723 CEP162Q5TB80 1403 aa30.25■■■□□ 2.43
USP30-209ENST00000536723 POTEAQ6S8J7 498 aa30.25■■■□□ 2.43
USP30-209ENST00000536723 EHBP1L1Q8N3D4 1523 aa30.23■■■□□ 2.43
USP30-209ENST00000536723 CAMSAP2Q08AD1 1489 aa30.2■■■□□ 2.43
USP30-209ENST00000536723 ZC3H13Q5T200 1668 aaKnown RBP30.19■■■□□ 2.42
USP30-209ENST00000536723 LTKP29376 864 aa30.18■■■□□ 2.42
USP30-209ENST00000536723 ERVK-7P63135 1459 aa30.18■■■□□ 2.42
USP30-209ENST00000536723 ABCC3O15438 1527 aa30.17■■■□□ 2.42
USP30-209ENST00000536723 TSPY4P0CV99 314 aa30.17■■■□□ 2.42
USP30-209ENST00000536723 TSPY10P0CW01 314 aa30.17■■■□□ 2.42
USP30-209ENST00000536723 SCAF11Q99590 1463 aaKnown RBP30.16■■■□□ 2.42
USP30-209ENST00000536723 TXNDC2Q86VQ3 553 aa30.15■■■□□ 2.42
USP30-209ENST00000536723 FAM135BQ49AJ0 1406 aa30.14■■■□□ 2.42
USP30-209ENST00000536723 NCOA2Q15596 1464 aa30.12■■■□□ 2.41
USP30-209ENST00000536723 UBR1Q8IWV7 1749 aa30.09■■■□□ 2.41
USP30-209ENST00000536723 ARHGAP23Q9P227 1491 aa30.08■■■□□ 2.41
USP30-209ENST00000536723 XIRP1Q702N8 1843 aaKnown RBP30.08■■■□□ 2.41
USP30-209ENST00000536723 ARHGEF5Q12774 1597 aa30.07■■■□□ 2.4
USP30-209ENST00000536723 SLIT1O75093 1534 aa30.05■■■□□ 2.4
USP30-209ENST00000536723 EID1Q9Y6B2 187 aa30.04■■■□□ 2.4
USP30-209ENST00000536723 TMEM94Q12767 1356 aa30.03■■■□□ 2.4
USP30-209ENST00000536723 MROH1Q8NDA8 1641 aa30■■■□□ 2.39
USP30-209ENST00000536723 RBM33Q96EV2 1170 aaKnown RBP29.97■■■□□ 2.39
USP30-209ENST00000536723 KCNA6P17658 529 aa29.96■■■□□ 2.39
USP30-209ENST00000536723 CFAP65Q6ZU64 1925 aaKnown RBP29.96■■■□□ 2.39
USP30-209ENST00000536723 EIF2AK4Q9P2K8 1649 aaKnown RBP29.96■■■□□ 2.39
USP30-209ENST00000536723 MAST1Q9Y2H9 1570 aa29.94■■■□□ 2.38
USP30-209ENST00000536723 TMEM2Q9UHN6 1383 aa29.94■■■□□ 2.38
USP30-209ENST00000536723 ROBO1Q9Y6N7 1651 aa29.94■■■□□ 2.38
USP30-209ENST00000536723 CEP152O94986 1710 aa29.93■■■□□ 2.38
USP30-209ENST00000536723 PROSER2Q86WR7 435 aaPredicted RBP29.93■■■□□ 2.38
USP30-209ENST00000536723 SETD1AO15047 1707 aaKnown RBP29.91■■■□□ 2.38
USP30-209ENST00000536723 ARHGAP31Q2M1Z3 1444 aa29.91■■■□□ 2.38
USP30-209ENST00000536723 MAP3K1Q13233 1512 aa29.9■■■□□ 2.38
USP30-209ENST00000536723 SLC26A8Q96RN1 970 aa29.89■■■□□ 2.38
USP30-209ENST00000536723 STAG3Q9UJ98 1225 aa29.89■■■□□ 2.38
USP30-209ENST00000536723 PIK3C2BO00750 1634 aa29.85■■■□□ 2.37
USP30-209ENST00000536723 LRRC9Q6ZRR7 1453 aa29.85■■■□□ 2.37
USP30-209ENST00000536723 JCADQ9P266 1359 aa29.84■■■□□ 2.37
USP30-209ENST00000536723 DUOX2Q9NRD8 1548 aa29.83■■■□□ 2.37
USP30-209ENST00000536723 SLAIN2Q9P270 581 aa29.83■■■□□ 2.37
USP30-209ENST00000536723 IDI1Q13907 227 aa29.82■■■□□ 2.36
USP30-209ENST00000536723 UPF1Q92900 1129 aaKnown RBP eCLIP29.82■■■□□ 2.36
USP30-209ENST00000536723 PRDM15P57071 1507 aaPredicted RBP29.81■■■□□ 2.36
USP30-209ENST00000536723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.81■■■□□ 2.36
USP30-209ENST00000536723 TET3O43151 1660 aa29.81■■■□□ 2.36
USP30-209ENST00000536723 MSH6P52701 1360 aa29.79■■■□□ 2.36
USP30-209ENST00000536723 EFCAB6Q5THR3 1501 aa29.78■■■□□ 2.36
USP30-209ENST00000536723 KIF15Q9NS87 1388 aa29.76■■■□□ 2.35
USP30-209ENST00000536723 NKTRP30414 1462 aaKnown RBP29.75■■■□□ 2.35
USP30-209ENST00000536723 PHLPP1O60346 1717 aa29.75■■■□□ 2.35
USP30-209ENST00000536723 RRP7BPQ9NSQ0 103 aa29.74■■■□□ 2.35
USP30-209ENST00000536723 MYOM3Q5VTT5 1437 aa29.73■■■□□ 2.35
USP30-209ENST00000536723 TRIM52Q96A61 297 aa29.73■■■□□ 2.35
USP30-209ENST00000536723 ERBINQ96RT1 1412 aa29.71■■■□□ 2.35
USP30-209ENST00000536723 ZNF772Q68DY9 489 aaPredicted RBP29.71■■■□□ 2.35
USP30-209ENST00000536723 BCANQ96GW7 911 aa29.71■■■□□ 2.35
USP30-209ENST00000536723 NWD1Q149M9 1564 aa29.71■■■□□ 2.35
USP30-209ENST00000536723 LRP6O75581 1613 aa29.7■■■□□ 2.34
USP30-209ENST00000536723 KDM5AP29375 1690 aaKnown RBP29.69■■■□□ 2.34
USP30-209ENST00000536723 SPATA31A6Q5VVP1 1343 aa29.69■■■□□ 2.34
USP30-209ENST00000536723 KANK1Q14678 1352 aa29.68■■■□□ 2.34
USP30-209ENST00000536723 KANK4Q5T7N3 995 aaPredicted RBP29.68■■■□□ 2.34
USP30-209ENST00000536723 MEX3CQ5U5Q3 659 aaKnown RBP29.68■■■□□ 2.34
USP30-209ENST00000536723 COL16A1Q07092 1604 aaPredicted RBP29.66■■■□□ 2.34
USP30-209ENST00000536723 ABCC5O15440 1437 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms