RNA–Protein interactions for RNA: ENST00000536722.5

RFX4-205, Transcript of regulatory factor X4, humanhuman

TSL 2

Gene RFX4, Length 1,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-205ENST00000536722 PTPRKQ15262 1439 aa17.64■□□□□ 0.42
RFX4-205ENST00000536722 DUOX2Q9NRD8 1548 aa17.64■□□□□ 0.41
RFX4-205ENST00000536722 PREX1Q8TCU6 1659 aa17.64■□□□□ 0.41
RFX4-205ENST00000536722 GGT6Q6P531 493 aa17.63■□□□□ 0.41
RFX4-205ENST00000536722 ADGRL2O95490 1459 aa17.63■□□□□ 0.41
RFX4-205ENST00000536722 KIF3BO15066 747 aa17.62■□□□□ 0.41
RFX4-205ENST00000536722 KIF15Q9NS87 1388 aa17.62■□□□□ 0.41
RFX4-205ENST00000536722 FAM50AQ14320 339 aaKnown RBP17.61■□□□□ 0.41
RFX4-205ENST00000536722 NCOA1Q15788 1441 aa17.61■□□□□ 0.41
RFX4-205ENST00000536722 ZMYM3Q14202 1370 aa17.6■□□□□ 0.41
RFX4-205ENST00000536722 KDM5DQ9BY66 1539 aa17.59■□□□□ 0.41
RFX4-205ENST00000536722 FAM135AQ9P2D6 1515 aa17.59■□□□□ 0.41
RFX4-205ENST00000536722 CHIC2Q9UKJ5 165 aa17.59■□□□□ 0.41
RFX4-205ENST00000536722 DEPDC5O75140 1603 aa17.58■□□□□ 0.41
RFX4-205ENST00000536722 RRP7BPQ9NSQ0 103 aa17.58■□□□□ 0.4
RFX4-205ENST00000536722 ERBINQ96RT1 1412 aa17.57■□□□□ 0.4
RFX4-205ENST00000536722 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
RFX4-205ENST00000536722 CEP152O94986 1710 aa17.57■□□□□ 0.4
RFX4-205ENST00000536722 ABCC3O15438 1527 aa17.57■□□□□ 0.4
RFX4-205ENST00000536722 PRDM15P57071 1507 aaPredicted RBP17.57■□□□□ 0.4
RFX4-205ENST00000536722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.56■□□□□ 0.4
RFX4-205ENST00000536722 ANKRD30AQ9BXX3 1397 aa17.55■□□□□ 0.4
RFX4-205ENST00000536722 ZC3H13Q5T200 1668 aaKnown RBP17.55■□□□□ 0.4
RFX4-205ENST00000536722 ESF1Q9H501 851 aaKnown RBP17.55■□□□□ 0.4
RFX4-205ENST00000536722 NPATQ14207 1427 aa17.55■□□□□ 0.4
RFX4-205ENST00000536722 HSPA2P54652 639 aa17.53■□□□□ 0.4
RFX4-205ENST00000536722 PZPP20742 1482 aa17.52■□□□□ 0.4
RFX4-205ENST00000536722 MYO3AQ8NEV4 1616 aa17.52■□□□□ 0.4
RFX4-205ENST00000536722 CAMSAP1Q5T5Y3 1602 aa17.51■□□□□ 0.39
RFX4-205ENST00000536722 UHRF1BP1Q6BDS2 1440 aa17.51■□□□□ 0.39
RFX4-205ENST00000536722 VWDEQ8N2E2 1590 aa17.51■□□□□ 0.39
RFX4-205ENST00000536722 ZNF142P52746 1687 aaPredicted RBP17.51■□□□□ 0.39
RFX4-205ENST00000536722 CFAP65Q6ZU64 1925 aaKnown RBP17.51■□□□□ 0.39
RFX4-205ENST00000536722 STRCQ7RTU9 1775 aa17.5■□□□□ 0.39
RFX4-205ENST00000536722 WASHC2CQ9Y4E1 1318 aa17.49■□□□□ 0.39
RFX4-205ENST00000536722 ROCK1Q13464 1354 aa17.49■□□□□ 0.39
RFX4-205ENST00000536722 ANKRD50Q9ULJ7 1429 aa17.47■□□□□ 0.39
RFX4-205ENST00000536722 FBXO31Q5XUX0 539 aaPredicted RBP17.47■□□□□ 0.39
RFX4-205ENST00000536722 CEP170BQ9Y4F5 1589 aaPredicted RBP17.46■□□□□ 0.39
RFX4-205ENST00000536722 SPATA31D1Q6ZQQ2 1576 aa17.45■□□□□ 0.38
RFX4-205ENST00000536722 LMTK2Q8IWU2 1503 aa17.45■□□□□ 0.38
RFX4-205ENST00000536722 UNC13BO14795 1591 aa17.45■□□□□ 0.38
RFX4-205ENST00000536722 ITGAEP38570 1179 aa17.44■□□□□ 0.38
RFX4-205ENST00000536722 ERVK-7P63135 1459 aa17.43■□□□□ 0.38
RFX4-205ENST00000536722 TNRQ92752 1358 aa17.42■□□□□ 0.38
RFX4-205ENST00000536722 ARHGAP31Q2M1Z3 1444 aa17.42■□□□□ 0.38
RFX4-205ENST00000536722 GCC2Q8IWJ2 1684 aa17.4■□□□□ 0.38
RFX4-205ENST00000536722 A2ML1A8K2U0 1454 aa17.4■□□□□ 0.38
RFX4-205ENST00000536722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.4■□□□□ 0.38
RFX4-205ENST00000536722 EFCAB6Q5THR3 1501 aa17.4■□□□□ 0.38
RFX4-205ENST00000536722 TET3O43151 1660 aa17.38■□□□□ 0.37
RFX4-205ENST00000536722 IQGAP3Q86VI3 1631 aa17.37■□□□□ 0.37
RFX4-205ENST00000536722 NAIPQ13075 1403 aa17.37■□□□□ 0.37
RFX4-205ENST00000536722 KANK1Q14678 1352 aa17.36■□□□□ 0.37
RFX4-205ENST00000536722 NLRP1Q9C000 1473 aa17.36■□□□□ 0.37
RFX4-205ENST00000536722 SYNMO15061 1565 aa17.36■□□□□ 0.37
RFX4-205ENST00000536722 PLA2R1Q13018 1463 aa17.35■□□□□ 0.37
RFX4-205ENST00000536722 E9PCH4 1651 aa17.34■□□□□ 0.37
RFX4-205ENST00000536722 UBR1Q8IWV7 1749 aa17.34■□□□□ 0.37
RFX4-205ENST00000536722 HFM1A2PYH4 1435 aa17.32■□□□□ 0.36
RFX4-205ENST00000536722 NOS1P29475 1434 aa17.32■□□□□ 0.36
RFX4-205ENST00000536722 UGGT1Q9NYU2 1555 aa17.32■□□□□ 0.36
RFX4-205ENST00000536722 POLR1AO95602 1720 aaPredicted RBP17.31■□□□□ 0.36
RFX4-205ENST00000536722 NEURL4Q96JN8 1562 aa17.31■□□□□ 0.36
RFX4-205ENST00000536722 PIK3C2BO00750 1634 aa17.3■□□□□ 0.36
RFX4-205ENST00000536722 RPRD2Q5VT52 1461 aaKnown RBP17.3■□□□□ 0.36
RFX4-205ENST00000536722 PTPRTO14522 1441 aa17.3■□□□□ 0.36
RFX4-205ENST00000536722 NCKAP5LQ9HCH0 1330 aa17.28■□□□□ 0.36
RFX4-205ENST00000536722 PPP4R3CPQ6ZMV5 832 aa17.27■□□□□ 0.36
RFX4-205ENST00000536722 NUP155O75694 1391 aa17.27■□□□□ 0.35
RFX4-205ENST00000536722 MYO5BQ9ULV0 1848 aa17.26■□□□□ 0.35
RFX4-205ENST00000536722 KDM5AP29375 1690 aaKnown RBP17.26■□□□□ 0.35
RFX4-205ENST00000536722 ARHGAP23Q9P227 1491 aa17.24■□□□□ 0.35
RFX4-205ENST00000536722 SLIT1O75093 1534 aa17.22■□□□□ 0.35
RFX4-205ENST00000536722 PKD2Q13563 968 aa17.22■□□□□ 0.35
RFX4-205ENST00000536722 IDI1Q13907 227 aa17.22■□□□□ 0.35
RFX4-205ENST00000536722 ADGRB3O60242 1522 aa17.21■□□□□ 0.35
RFX4-205ENST00000536722 LTBP4Q8N2S1 1624 aa17.21■□□□□ 0.35
RFX4-205ENST00000536722 SPHKAPQ2M3C7 1700 aa17.21■□□□□ 0.35
RFX4-205ENST00000536722 THEMISQ8N1K5 641 aaPredicted RBP17.21■□□□□ 0.35
RFX4-205ENST00000536722 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
RFX4-205ENST00000536722 MED14O60244 1454 aa17.2■□□□□ 0.34
RFX4-205ENST00000536722 TMEM131LA2VDJ0 1609 aa17.19■□□□□ 0.34
RFX4-205ENST00000536722 IQGAP1P46940 1657 aa17.19■□□□□ 0.34
RFX4-205ENST00000536722 LTKP29376 864 aa17.16■□□□□ 0.34
RFX4-205ENST00000536722 SLC52A1Q9NWF4 448 aa17.16■□□□□ 0.34
RFX4-205ENST00000536722 TMEM2Q9UHN6 1383 aa17.15■□□□□ 0.34
RFX4-205ENST00000536722 NPHP4O75161 1426 aaPredicted RBP17.15■□□□□ 0.34
RFX4-205ENST00000536722 ANKLE2Q86XL3 938 aa17.15■□□□□ 0.34
RFX4-205ENST00000536722 SCAF11Q99590 1463 aaKnown RBP17.15■□□□□ 0.34
RFX4-205ENST00000536722 CLTCL1P53675 1640 aa17.14■□□□□ 0.33
RFX4-205ENST00000536722 STRCP1A6NGW2 1772 aa17.13■□□□□ 0.33
RFX4-205ENST00000536722 ZNF335Q9H4Z2 1342 aaPredicted RBP17.13■□□□□ 0.33
RFX4-205ENST00000536722 ZFYVE9O95405 1425 aa17.13■□□□□ 0.33
RFX4-205ENST00000536722 TRPM2O94759 1503 aa17.12■□□□□ 0.33
RFX4-205ENST00000536722 SETD5Q9C0A6 1442 aa17.12■□□□□ 0.33
RFX4-205ENST00000536722 CERKQ8TCT0 537 aa17.1■□□□□ 0.33
RFX4-205ENST00000536722 TRIM52Q96A61 297 aa17.1■□□□□ 0.33
RFX4-205ENST00000536722 RAB3GAP2Q9H2M9 1393 aa17.08■□□□□ 0.32
RFX4-205ENST00000536722 ILDR1Q86SU0 546 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms