RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 CCDC18Q5T9S5 1454 aa8.7□□□□□ -1.02
CHD4-205ENST00000536301 ZNF644Q9H582 1327 aaPredicted RBP8.69□□□□□ -1.02
CHD4-205ENST00000536301 TNRQ92752 1358 aa8.69□□□□□ -1.02
CHD4-205ENST00000536301 ADGBQ8N7X0 1667 aa8.69□□□□□ -1.02
CHD4-205ENST00000536301 NPHP4O75161 1426 aaPredicted RBP8.67□□□□□ -1.02
CHD4-205ENST00000536301 LRRC7Q96NW7 1537 aa8.67□□□□□ -1.02
CHD4-205ENST00000536301 KIAA1107Q9UPP5 1409 aa8.67□□□□□ -1.02
CHD4-205ENST00000536301 CFDP1Q9UEE9 299 aaPredicted RBP8.66□□□□□ -1.02
CHD4-205ENST00000536301 IQGAP1P46940 1657 aa8.65□□□□□ -1.02
CHD4-205ENST00000536301 PZPP20742 1482 aa8.65□□□□□ -1.02
CHD4-205ENST00000536301 MBD5Q9P267 1494 aa8.65□□□□□ -1.02
CHD4-205ENST00000536301 XIRP1Q702N8 1843 aaKnown RBP8.65□□□□□ -1.02
CHD4-205ENST00000536301 SETD1AO15047 1707 aaKnown RBP8.65□□□□□ -1.03
CHD4-205ENST00000536301 DEPDC5O75140 1603 aa8.65□□□□□ -1.03
CHD4-205ENST00000536301 RNF17Q9BXT8 1623 aaKnown RBP8.65□□□□□ -1.03
CHD4-205ENST00000536301 MED14O60244 1454 aa8.64□□□□□ -1.03
CHD4-205ENST00000536301 PLEKHH2Q8IVE3 1493 aa8.64□□□□□ -1.03
CHD4-205ENST00000536301 FYCO1Q9BQS8 1478 aa8.64□□□□□ -1.03
CHD4-205ENST00000536301 CFAP65Q6ZU64 1925 aaKnown RBP8.64□□□□□ -1.03
CHD4-205ENST00000536301 POTEAQ6S8J7 498 aa8.64□□□□□ -1.03
CHD4-205ENST00000536301 ANKLE2Q86XL3 938 aa8.64□□□□□ -1.03
CHD4-205ENST00000536301 TIAM1Q13009 1591 aa8.64□□□□□ -1.03
CHD4-205ENST00000536301 UGGT1Q9NYU2 1555 aa8.64□□□□□ -1.03
CHD4-205ENST00000536301 DHX29Q7Z478 1369 aaKnown RBP8.63□□□□□ -1.03
CHD4-205ENST00000536301 CCNB3Q8WWL7 1395 aa8.63□□□□□ -1.03
CHD4-205ENST00000536301 ZC3H13Q5T200 1668 aaKnown RBP8.63□□□□□ -1.03
CHD4-205ENST00000536301 KIF3BO15066 747 aa8.63□□□□□ -1.03
CHD4-205ENST00000536301 KDM5DQ9BY66 1539 aa8.63□□□□□ -1.03
CHD4-205ENST00000536301 MIA2Q96PC5 1412 aa8.63□□□□□ -1.03
CHD4-205ENST00000536301 SYNMO15061 1565 aa8.61□□□□□ -1.03
CHD4-205ENST00000536301 FAM135AQ9P2D6 1515 aa8.61□□□□□ -1.03
CHD4-205ENST00000536301 NLRP1Q9C000 1473 aa8.6□□□□□ -1.03
CHD4-205ENST00000536301 THEMISQ8N1K5 641 aaPredicted RBP8.6□□□□□ -1.03
CHD4-205ENST00000536301 RTEL1-TNFRSF6BF6WH68 1400 aa8.6□□□□□ -1.03
CHD4-205ENST00000536301 WASHC2CQ9Y4E1 1318 aa8.59□□□□□ -1.03
CHD4-205ENST00000536301 MTUS2Q5JR59 1369 aa8.59□□□□□ -1.03
CHD4-205ENST00000536301 UBR1Q8IWV7 1749 aa8.58□□□□□ -1.04
CHD4-205ENST00000536301 ERVK-7P63135 1459 aa8.57□□□□□ -1.04
CHD4-205ENST00000536301 NCOA2Q15596 1464 aa8.57□□□□□ -1.04
CHD4-205ENST00000536301 CEP152O94986 1710 aa8.57□□□□□ -1.04
CHD4-205ENST00000536301 LTKP29376 864 aa8.57□□□□□ -1.04
CHD4-205ENST00000536301 CHIC1Q5VXU3 224 aa8.57□□□□□ -1.04
CHD4-205ENST00000536301 ABCC3O15438 1527 aa8.57□□□□□ -1.04
CHD4-205ENST00000536301 CAMSAP2Q08AD1 1489 aa8.57□□□□□ -1.04
CHD4-205ENST00000536301 CCDC141Q6ZP82 1450 aa8.57□□□□□ -1.04
CHD4-205ENST00000536301 MROH1Q8NDA8 1641 aa8.56□□□□□ -1.04
CHD4-205ENST00000536301 RBM33Q96EV2 1170 aaKnown RBP8.56□□□□□ -1.04
CHD4-205ENST00000536301 SCAF11Q99590 1463 aaKnown RBP8.56□□□□□ -1.04
CHD4-205ENST00000536301 EHBP1L1Q8N3D4 1523 aa8.55□□□□□ -1.04
CHD4-205ENST00000536301 ROBO1Q9Y6N7 1651 aa8.55□□□□□ -1.04
CHD4-205ENST00000536301 ARHGAP23Q9P227 1491 aa8.54□□□□□ -1.04
CHD4-205ENST00000536301 MAP3K1Q13233 1512 aa8.54□□□□□ -1.04
CHD4-205ENST00000536301 FAM135BQ49AJ0 1406 aa8.54□□□□□ -1.04
CHD4-205ENST00000536301 CEP162Q5TB80 1403 aa8.54□□□□□ -1.04
CHD4-205ENST00000536301 TMEM94Q12767 1356 aa8.53□□□□□ -1.04
CHD4-205ENST00000536301 SLIT1O75093 1534 aa8.53□□□□□ -1.04
CHD4-205ENST00000536301 TXNDC2Q86VQ3 553 aa8.52□□□□□ -1.05
CHD4-205ENST00000536301 ARHGEF5Q12774 1597 aa8.52□□□□□ -1.05
CHD4-205ENST00000536301 PIK3C2BO00750 1634 aa8.51□□□□□ -1.05
CHD4-205ENST00000536301 PHLPP1O60346 1717 aa8.5□□□□□ -1.05
CHD4-205ENST00000536301 UPF1Q92900 1129 aaKnown RBP eCLIP8.5□□□□□ -1.05
CHD4-205ENST00000536301 LRP6O75581 1613 aa8.5□□□□□ -1.05
CHD4-205ENST00000536301 EIF2AK4Q9P2K8 1649 aaKnown RBP8.49□□□□□ -1.05
CHD4-205ENST00000536301 SRCAPQ6ZRS2 3230 aa8.48□□□□□ -1.05
CHD4-205ENST00000536301 MAST1Q9Y2H9 1570 aa8.48□□□□□ -1.05
CHD4-205ENST00000536301 SLC26A8Q96RN1 970 aa8.48□□□□□ -1.05
CHD4-205ENST00000536301 COL16A1Q07092 1604 aaPredicted RBP8.47□□□□□ -1.05
CHD4-205ENST00000536301 TET3O43151 1660 aa8.47□□□□□ -1.05
CHD4-205ENST00000536301 KCNA6P17658 529 aa8.47□□□□□ -1.05
CHD4-205ENST00000536301 PROSER2Q86WR7 435 aaPredicted RBP8.47□□□□□ -1.05
CHD4-205ENST00000536301 TRIM52Q96A61 297 aa8.47□□□□□ -1.05
CHD4-205ENST00000536301 TMEM2Q9UHN6 1383 aa8.47□□□□□ -1.05
CHD4-205ENST00000536301 PRDM15P57071 1507 aaPredicted RBP8.46□□□□□ -1.05
CHD4-205ENST00000536301 TSPY4P0CV99 314 aa8.46□□□□□ -1.06
CHD4-205ENST00000536301 TSPY10P0CW01 314 aa8.46□□□□□ -1.06
CHD4-205ENST00000536301 NWD1Q149M9 1564 aa8.46□□□□□ -1.06
CHD4-205ENST00000536301 JCADQ9P266 1359 aa8.46□□□□□ -1.06
CHD4-205ENST00000536301 RSPH4AQ5TD94 716 aa8.45□□□□□ -1.06
CHD4-205ENST00000536301 ARHGAP31Q2M1Z3 1444 aa8.45□□□□□ -1.06
CHD4-205ENST00000536301 LRRC9Q6ZRR7 1453 aa8.45□□□□□ -1.06
CHD4-205ENST00000536301 IDI1Q13907 227 aa8.44□□□□□ -1.06
CHD4-205ENST00000536301 EID1Q9Y6B2 187 aa8.44□□□□□ -1.06
CHD4-205ENST00000536301 MYO5BQ9ULV0 1848 aa8.44□□□□□ -1.06
CHD4-205ENST00000536301 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
CHD4-205ENST00000536301 KDM5AP29375 1690 aaKnown RBP8.43□□□□□ -1.06
CHD4-205ENST00000536301 CHD2O14647 1828 aaKnown RBP8.43□□□□□ -1.06
CHD4-205ENST00000536301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.43□□□□□ -1.062e-8■■■■□ 22.2
CHD4-205ENST00000536301 SLAIN2Q9P270 581 aa8.43□□□□□ -1.06
CHD4-205ENST00000536301 NKTRP30414 1462 aaKnown RBP8.43□□□□□ -1.06
CHD4-205ENST00000536301 DUOX2Q9NRD8 1548 aa8.43□□□□□ -1.06
CHD4-205ENST00000536301 MSH6P52701 1360 aa8.42□□□□□ -1.06
CHD4-205ENST00000536301 SHPRHQ149N8 1683 aa8.41□□□□□ -1.06
CHD4-205ENST00000536301 ADGRB3O60242 1522 aa8.41□□□□□ -1.06
CHD4-205ENST00000536301 KIF15Q9NS87 1388 aa8.41□□□□□ -1.06
CHD4-205ENST00000536301 STAG3Q9UJ98 1225 aa8.41□□□□□ -1.06
CHD4-205ENST00000536301 DIP2AQ14689 1571 aa8.4□□□□□ -1.06
CHD4-205ENST00000536301 KANK4Q5T7N3 995 aaPredicted RBP8.4□□□□□ -1.06
CHD4-205ENST00000536301 MEX3CQ5U5Q3 659 aaKnown RBP8.4□□□□□ -1.06
CHD4-205ENST00000536301 RRP7BPQ9NSQ0 103 aa8.4□□□□□ -1.06
CHD4-205ENST00000536301 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms