RNA–Protein interactions for RNA: ENST00000536072.6

EDC4-202, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-202ENST00000536072 KIF7Q2M1P5 1343 aa23.1■■□□□ 1.29
EDC4-202ENST00000536072 PLA2R1Q13018 1463 aa23.1■■□□□ 1.29
EDC4-202ENST00000536072 CCDC144AA2RUR9 1427 aa23.09■■□□□ 1.29
EDC4-202ENST00000536072 MAGI2Q86UL8 1455 aa23.08■■□□□ 1.29
EDC4-202ENST00000536072 RALGAPBQ86X10 1494 aa23.07■■□□□ 1.28
EDC4-202ENST00000536072 ZFYVE16Q7Z3T8 1539 aa23.07■■□□□ 1.28
EDC4-202ENST00000536072 RTEL1-TNFRSF6BF6WH68 1400 aa23.07■■□□□ 1.28
EDC4-202ENST00000536072 NPM1P06748 294 aaKnown RBP eCLIP23.05■■□□□ 1.28
EDC4-202ENST00000536072 KDM5CP41229 1560 aa23.04■■□□□ 1.28
EDC4-202ENST00000536072 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
EDC4-202ENST00000536072 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
EDC4-202ENST00000536072 SCAPERQ9BY12 1400 aa23.02■■□□□ 1.28
EDC4-202ENST00000536072 ADGRL1O94910 1474 aa23.02■■□□□ 1.28
EDC4-202ENST00000536072 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
EDC4-202ENST00000536072 BCORL1Q5H9F3 1711 aa23.01■■□□□ 1.27
EDC4-202ENST00000536072 MYT1LQ9UL68 1186 aa22.99■■□□□ 1.27
EDC4-202ENST00000536072 ATP7AQ04656 1500 aa22.98■■□□□ 1.27
EDC4-202ENST00000536072 INO80Q9ULG1 1556 aaPredicted RBP22.97■■□□□ 1.27
EDC4-202ENST00000536072 POLR3GLQ9BT43 218 aa22.97■■□□□ 1.27
EDC4-202ENST00000536072 ATP10AO60312 1499 aa22.96■■□□□ 1.27
EDC4-202ENST00000536072 A2MP01023 1474 aa22.96■■□□□ 1.27
EDC4-202ENST00000536072 PRAG1Q86YV5 1406 aa22.96■■□□□ 1.27
EDC4-202ENST00000536072 PRKRIP1Q9H875 184 aaPredicted RBP22.95■■□□□ 1.26
EDC4-202ENST00000536072 ROCK2O75116 1388 aaKnown RBP22.95■■□□□ 1.26
EDC4-202ENST00000536072 ST20-MTHFSA0A0A6YYL1 179 aa22.93■■□□□ 1.26
EDC4-202ENST00000536072 CCDC184Q52MB2 194 aa22.91■■□□□ 1.26
EDC4-202ENST00000536072 KIF3BO15066 747 aa22.91■■□□□ 1.26
EDC4-202ENST00000536072 E9PCH4 1651 aa22.9■■□□□ 1.26
EDC4-202ENST00000536072 DEPDC5O75140 1603 aa22.9■■□□□ 1.26
EDC4-202ENST00000536072 TRPM1Q7Z4N2 1603 aa22.9■■□□□ 1.26
EDC4-202ENST00000536072 CD109Q6YHK3 1445 aa22.89■■□□□ 1.26
EDC4-202ENST00000536072 NBPF1Q3BBV0 1214 aa22.89■■□□□ 1.26
EDC4-202ENST00000536072 ARID4BQ4LE39 1312 aaPredicted RBP22.88■■□□□ 1.25
EDC4-202ENST00000536072 DHX29Q7Z478 1369 aaKnown RBP22.88■■□□□ 1.25
EDC4-202ENST00000536072 KANK1Q14678 1352 aa22.85■■□□□ 1.25
EDC4-202ENST00000536072 SUPT16HQ9Y5B9 1047 aaKnown RBP22.85■■□□□ 1.25
EDC4-202ENST00000536072 ZNF518AQ6AHZ1 1483 aa22.84■■□□□ 1.25
EDC4-202ENST00000536072 KIDINS220Q9ULH0 1771 aa22.84■■□□□ 1.25
EDC4-202ENST00000536072 HNRNPUQ00839 825 aaKnown RBP eCLIP22.83■■□□□ 1.24
EDC4-202ENST00000536072 CNGB1Q14028 1251 aaPredicted RBP22.83■■□□□ 1.24
EDC4-202ENST00000536072 VWDEQ8N2E2 1590 aa22.82■■□□□ 1.24
EDC4-202ENST00000536072 TRPM2O94759 1503 aa22.82■■□□□ 1.24
EDC4-202ENST00000536072 TET3O43151 1660 aa22.82■■□□□ 1.24
EDC4-202ENST00000536072 PTPRTO14522 1441 aa22.82■■□□□ 1.24
EDC4-202ENST00000536072 GPRASP1Q5JY77 1395 aa22.81■■□□□ 1.24
EDC4-202ENST00000536072 MRS2Q9HD23 443 aa22.81■■□□□ 1.24
EDC4-202ENST00000536072 EIF2AK4Q9P2K8 1649 aaKnown RBP22.81■■□□□ 1.24
EDC4-202ENST00000536072 MROH1Q8NDA8 1641 aa22.8■■□□□ 1.24
EDC4-202ENST00000536072 SPHKAPQ2M3C7 1700 aa22.8■■□□□ 1.24
EDC4-202ENST00000536072 PRDM15P57071 1507 aaPredicted RBP22.79■■□□□ 1.24
EDC4-202ENST00000536072 CFAP74Q9C0B2 1584 aa22.79■■□□□ 1.24
EDC4-202ENST00000536072 POGZQ7Z3K3 1410 aa22.78■■□□□ 1.24
EDC4-202ENST00000536072 CLTCL1P53675 1640 aa22.78■■□□□ 1.24
EDC4-202ENST00000536072 FAM9BQ8IZU0 186 aa22.76■■□□□ 1.23
EDC4-202ENST00000536072 LAMC1P11047 1609 aa22.74■■□□□ 1.23
EDC4-202ENST00000536072 CEP152O94986 1710 aa22.74■■□□□ 1.23
EDC4-202ENST00000536072 CYB5RLQ6IPT4 315 aa22.73■■□□□ 1.23
EDC4-202ENST00000536072 MLH3Q9UHC1 1453 aa22.72■■□□□ 1.23
EDC4-202ENST00000536072 RAPGEF3O95398 923 aa22.7■■□□□ 1.22
EDC4-202ENST00000536072 TESK2Q96S53 571 aa22.7■■□□□ 1.22
EDC4-202ENST00000536072 MADDQ8WXG6 1647 aa22.7■■□□□ 1.22
EDC4-202ENST00000536072 HECW2Q9P2P5 1572 aa22.69■■□□□ 1.22
EDC4-202ENST00000536072 EFCAB6Q5THR3 1501 aa22.69■■□□□ 1.22
EDC4-202ENST00000536072 FRMPD1Q5SYB0 1578 aa22.69■■□□□ 1.22
EDC4-202ENST00000536072 UGGT1Q9NYU2 1555 aa22.69■■□□□ 1.22
EDC4-202ENST00000536072 RNF17Q9BXT8 1623 aaKnown RBP22.68■■□□□ 1.22
EDC4-202ENST00000536072 NEO1Q92859 1461 aa22.68■■□□□ 1.22
EDC4-202ENST00000536072 DISP3Q9P2K9 1392 aa22.67■■□□□ 1.22
EDC4-202ENST00000536072 PPRC1Q5VV67 1664 aaKnown RBP22.67■■□□□ 1.22
EDC4-202ENST00000536072 FKBP8Q14318 412 aa22.67■■□□□ 1.22
EDC4-202ENST00000536072 GGT6Q6P531 493 aa22.66■■□□□ 1.22
EDC4-202ENST00000536072 COL17A1Q9UMD9 1497 aaPredicted RBP22.65■■□□□ 1.22
EDC4-202ENST00000536072 ABCA6Q8N139 1617 aa22.64■■□□□ 1.22
EDC4-202ENST00000536072 LMTK2Q8IWU2 1503 aa22.64■■□□□ 1.22
EDC4-202ENST00000536072 STAC3Q96MF2 364 aa22.63■■□□□ 1.21
EDC4-202ENST00000536072 TMF1P82094 1093 aa22.61■■□□□ 1.21
EDC4-202ENST00000536072 NEFLP07196 543 aa22.6■■□□□ 1.21
EDC4-202ENST00000536072 BCANQ96GW7 911 aa22.6■■□□□ 1.21
EDC4-202ENST00000536072 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
EDC4-202ENST00000536072 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
EDC4-202ENST00000536072 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
EDC4-202ENST00000536072 MAP3K4Q9Y6R4 1608 aa22.59■■□□□ 1.21
EDC4-202ENST00000536072 NEURL4Q96JN8 1562 aa22.59■■□□□ 1.21
EDC4-202ENST00000536072 NPATQ14207 1427 aa22.58■■□□□ 1.2
EDC4-202ENST00000536072 IQGAP1P46940 1657 aa22.57■■□□□ 1.2
EDC4-202ENST00000536072 WASHC2CQ9Y4E1 1318 aa22.56■■□□□ 1.2
EDC4-202ENST00000536072 KIF1BO60333 1816 aa22.56■■□□□ 1.2
EDC4-202ENST00000536072 ZBED9Q6R2W3 1325 aa22.56■■□□□ 1.2
EDC4-202ENST00000536072 RALBP1Q15311 655 aa22.56■■□□□ 1.2
EDC4-202ENST00000536072 TMC1Q8TDI8 760 aa22.56■■□□□ 1.2
EDC4-202ENST00000536072 ADGRF5Q8IZF2 1346 aa22.55■■□□□ 1.2
EDC4-202ENST00000536072 SCAF11Q99590 1463 aaKnown RBP22.55■■□□□ 1.2
EDC4-202ENST00000536072 PER1O15534 1290 aaPredicted RBP22.55■■□□□ 1.2
EDC4-202ENST00000536072 DIP2CQ9Y2E4 1556 aa22.55■■□□□ 1.2
EDC4-202ENST00000536072 CHGAP10645 457 aaKnown RBP22.54■■□□□ 1.2
EDC4-202ENST00000536072 MROH2AA6NES4 1674 aa22.54■■□□□ 1.2
EDC4-202ENST00000536072 MYBBP1AQ9BQG0 1328 aaKnown RBP22.54■■□□□ 1.2
EDC4-202ENST00000536072 ABCC3O15438 1527 aa22.54■■□□□ 1.2
EDC4-202ENST00000536072 KTN1Q86UP2 1357 aaKnown RBP22.54■■□□□ 1.2
EDC4-202ENST00000536072 RICTORQ6R327 1708 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms