RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 KIF3BO15066 747 aa20.67■□□□□ 0.9
TNFRSF1A-207ENST00000535958 RSPH4AQ5TD94 716 aa20.67■□□□□ 0.9
TNFRSF1A-207ENST00000535958 UBAP1LF5GYI3 381 aa20.66■□□□□ 0.9
TNFRSF1A-207ENST00000535958 TNRQ92752 1358 aa20.65■□□□□ 0.9
TNFRSF1A-207ENST00000535958 DNMT1P26358 1616 aaKnown RBP20.64■□□□□ 0.9
TNFRSF1A-207ENST00000535958 WASHC2CQ9Y4E1 1318 aa20.64■□□□□ 0.89
TNFRSF1A-207ENST00000535958 TSPY4P0CV99 314 aa20.63■□□□□ 0.89
TNFRSF1A-207ENST00000535958 TSPY10P0CW01 314 aa20.63■□□□□ 0.89
TNFRSF1A-207ENST00000535958 POLR1AO95602 1720 aaPredicted RBP20.63■□□□□ 0.89
TNFRSF1A-207ENST00000535958 PZPP20742 1482 aa20.62■□□□□ 0.89
TNFRSF1A-207ENST00000535958 ARHGEF5Q12774 1597 aa20.61■□□□□ 0.89
TNFRSF1A-207ENST00000535958 ILDR2Q71H61 639 aa20.59■□□□□ 0.89
TNFRSF1A-207ENST00000535958 FBXO31Q5XUX0 539 aaPredicted RBP20.58■□□□□ 0.89
TNFRSF1A-207ENST00000535958 SOCS7O14512 581 aa20.57■□□□□ 0.88
TNFRSF1A-207ENST00000535958 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
TNFRSF1A-207ENST00000535958 NLRP1Q9C000 1473 aa20.56■□□□□ 0.88
TNFRSF1A-207ENST00000535958 VPS8Q8N3P4 1428 aa20.55■□□□□ 0.88
TNFRSF1A-207ENST00000535958 CPS1P31327 1500 aa20.55■□□□□ 0.88
TNFRSF1A-207ENST00000535958 LRRC9Q6ZRR7 1453 aa20.55■□□□□ 0.88
TNFRSF1A-207ENST00000535958 ANKLE2Q86XL3 938 aa20.54■□□□□ 0.88
TNFRSF1A-207ENST00000535958 THEMISQ8N1K5 641 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1A-207ENST00000535958 UGGT1Q9NYU2 1555 aa20.54■□□□□ 0.88
TNFRSF1A-207ENST00000535958 NEURL4Q96JN8 1562 aa20.53■□□□□ 0.88
TNFRSF1A-207ENST00000535958 ZC3H13Q5T200 1668 aaKnown RBP20.53■□□□□ 0.88
TNFRSF1A-207ENST00000535958 MIA2Q96PC5 1412 aa20.53■□□□□ 0.88
TNFRSF1A-207ENST00000535958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.52■□□□□ 0.88
TNFRSF1A-207ENST00000535958 MAST1Q9Y2H9 1570 aa20.51■□□□□ 0.87
TNFRSF1A-207ENST00000535958 RNF17Q9BXT8 1623 aaKnown RBP20.51■□□□□ 0.87
TNFRSF1A-207ENST00000535958 SHANK2Q9UPX8 1470 aa20.5■□□□□ 0.87
TNFRSF1A-207ENST00000535958 EIF2AK4Q9P2K8 1649 aaKnown RBP20.49■□□□□ 0.87
TNFRSF1A-207ENST00000535958 TOM1O60784 492 aa20.49■□□□□ 0.87
TNFRSF1A-207ENST00000535958 PIP4K2BP78356 416 aa20.48■□□□□ 0.87
TNFRSF1A-207ENST00000535958 ABCC3O15438 1527 aa20.48■□□□□ 0.87
TNFRSF1A-207ENST00000535958 NPHP4O75161 1426 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF1A-207ENST00000535958 DEPDC5O75140 1603 aa20.46■□□□□ 0.87
TNFRSF1A-207ENST00000535958 MYOM3Q5VTT5 1437 aa20.45■□□□□ 0.86
TNFRSF1A-207ENST00000535958 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
TNFRSF1A-207ENST00000535958 MAP3K1Q13233 1512 aa20.44■□□□□ 0.86
TNFRSF1A-207ENST00000535958 MED14O60244 1454 aa20.43■□□□□ 0.86
TNFRSF1A-207ENST00000535958 ERVK-7P63135 1459 aa20.43■□□□□ 0.86
TNFRSF1A-207ENST00000535958 DUOX2Q9NRD8 1548 aa20.43■□□□□ 0.86
TNFRSF1A-207ENST00000535958 VWDEQ8N2E2 1590 aa20.42■□□□□ 0.86
TNFRSF1A-207ENST00000535958 CEP152O94986 1710 aa20.41■□□□□ 0.86
TNFRSF1A-207ENST00000535958 APLP2Q06481 763 aa20.41■□□□□ 0.86
TNFRSF1A-207ENST00000535958 LOC105371045A0A1W2PR82 267 aa20.39■□□□□ 0.85
TNFRSF1A-207ENST00000535958 HSPA1LP34931 641 aa20.39■□□□□ 0.85
TNFRSF1A-207ENST00000535958 KANK4Q5T7N3 995 aaPredicted RBP20.39■□□□□ 0.85
TNFRSF1A-207ENST00000535958 MROH1Q8NDA8 1641 aa20.38■□□□□ 0.85
TNFRSF1A-207ENST00000535958 SYNMO15061 1565 aa20.37■□□□□ 0.85
TNFRSF1A-207ENST00000535958 KIF15Q9NS87 1388 aa20.36■□□□□ 0.85
TNFRSF1A-207ENST00000535958 ERBINQ96RT1 1412 aa20.36■□□□□ 0.85
TNFRSF1A-207ENST00000535958 CROCC2H7BZ55 1655 aa20.35■□□□□ 0.85
TNFRSF1A-207ENST00000535958 MED1Q15648 1581 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF1A-207ENST00000535958 UBR1Q8IWV7 1749 aa20.35■□□□□ 0.85
TNFRSF1A-207ENST00000535958 CFAP65Q6ZU64 1925 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1A-207ENST00000535958 PRDM15P57071 1507 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF1A-207ENST00000535958 SCAF11Q99590 1463 aaKnown RBP20.33■□□□□ 0.85
TNFRSF1A-207ENST00000535958 PTPN23Q9H3S7 1636 aa20.33■□□□□ 0.84
TNFRSF1A-207ENST00000535958 KANK1Q14678 1352 aa20.33■□□□□ 0.84
TNFRSF1A-207ENST00000535958 PHF23Q9BUL5 403 aaPredicted RBP20.32■□□□□ 0.84
TNFRSF1A-207ENST00000535958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.31■□□□□ 0.84
TNFRSF1A-207ENST00000535958 RRP7BPQ9NSQ0 103 aa20.31■□□□□ 0.84
TNFRSF1A-207ENST00000535958 STAG3Q9UJ98 1225 aa20.3■□□□□ 0.84
TNFRSF1A-207ENST00000535958 EID1Q9Y6B2 187 aa20.3■□□□□ 0.84
TNFRSF1A-207ENST00000535958 LRRC7Q96NW7 1537 aa20.3■□□□□ 0.84
TNFRSF1A-207ENST00000535958 ARHGAP31Q2M1Z3 1444 aa20.29■□□□□ 0.84
TNFRSF1A-207ENST00000535958 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
TNFRSF1A-207ENST00000535958 ABCC5O15440 1437 aa20.28■□□□□ 0.84
TNFRSF1A-207ENST00000535958 STRCP1A6NGW2 1772 aa20.28■□□□□ 0.84
TNFRSF1A-207ENST00000535958 DAPK1P53355 1430 aa20.27■□□□□ 0.84
TNFRSF1A-207ENST00000535958 TXNDC2Q86VQ3 553 aa20.27■□□□□ 0.84
TNFRSF1A-207ENST00000535958 SLIT1O75093 1534 aa20.27■□□□□ 0.83
TNFRSF1A-207ENST00000535958 FGD6Q6ZV73 1430 aa20.25■□□□□ 0.83
TNFRSF1A-207ENST00000535958 ARHGAP23Q9P227 1491 aa20.24■□□□□ 0.83
TNFRSF1A-207ENST00000535958 PIK3C2BO00750 1634 aa20.24■□□□□ 0.83
TNFRSF1A-207ENST00000535958 ANKRD30AQ9BXX3 1397 aa20.24■□□□□ 0.83
TNFRSF1A-207ENST00000535958 ALKQ9UM73 1620 aa20.24■□□□□ 0.83
TNFRSF1A-207ENST00000535958 LTKP29376 864 aa20.21■□□□□ 0.83
TNFRSF1A-207ENST00000535958 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
TNFRSF1A-207ENST00000535958 EFCAB6Q5THR3 1501 aa20.21■□□□□ 0.83
TNFRSF1A-207ENST00000535958 TMEM2Q9UHN6 1383 aa20.2■□□□□ 0.82
TNFRSF1A-207ENST00000535958 LMTK2Q8IWU2 1503 aa20.18■□□□□ 0.82
TNFRSF1A-207ENST00000535958 KDM5AP29375 1690 aaKnown RBP20.18■□□□□ 0.82
TNFRSF1A-207ENST00000535958 ADGRB3O60242 1522 aa20.14■□□□□ 0.81
TNFRSF1A-207ENST00000535958 BCANQ96GW7 911 aa20.14■□□□□ 0.81
TNFRSF1A-207ENST00000535958 XIRP1Q702N8 1843 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1A-207ENST00000535958 IDI1Q13907 227 aa20.12■□□□□ 0.81
TNFRSF1A-207ENST00000535958 FAM50AQ14320 339 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1A-207ENST00000535958 ADGRL2O95490 1459 aa20.11■□□□□ 0.81
TNFRSF1A-207ENST00000535958 TMEM94Q12767 1356 aa20.1■□□□□ 0.81
TNFRSF1A-207ENST00000535958 SLC52A1Q9NWF4 448 aa20.09■□□□□ 0.81
TNFRSF1A-207ENST00000535958 NOS1P29475 1434 aa20.09■□□□□ 0.81
TNFRSF1A-207ENST00000535958 KCNA6P17658 529 aa20.08■□□□□ 0.81
TNFRSF1A-207ENST00000535958 PROSER2Q86WR7 435 aaPredicted RBP20.08■□□□□ 0.81
TNFRSF1A-207ENST00000535958 SLC26A8Q96RN1 970 aa20.08■□□□□ 0.81
TNFRSF1A-207ENST00000535958 NKTRP30414 1462 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-207ENST00000535958 RPRD2Q5VT52 1461 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-207ENST00000535958 PPP1R15AO75807 674 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1A-207ENST00000535958 ANKRD50Q9ULJ7 1429 aa20.07■□□□□ 0.8
TNFRSF1A-207ENST00000535958 FAM135BQ49AJ0 1406 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms