RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 PIP4K2BP78356 416 aa12.92□□□□□ -0.34
CHFR-211ENST00000535897 KDM5DQ9BY66 1539 aa12.92□□□□□ -0.34
CHFR-211ENST00000535897 DHX29Q7Z478 1369 aaKnown RBP12.92□□□□□ -0.34
CHFR-211ENST00000535897 TNRQ92752 1358 aa12.92□□□□□ -0.34
CHFR-211ENST00000535897 FBXO31Q5XUX0 539 aaPredicted RBP12.91□□□□□ -0.34
CHFR-211ENST00000535897 CCDC141Q6ZP82 1450 aa12.91□□□□□ -0.34
CHFR-211ENST00000535897 WASHC2CQ9Y4E1 1318 aa12.9□□□□□ -0.34
CHFR-211ENST00000535897 CEP162Q5TB80 1403 aa12.9□□□□□ -0.34
CHFR-211ENST00000535897 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
CHFR-211ENST00000535897 CPS1P31327 1500 aa12.89□□□□□ -0.35
CHFR-211ENST00000535897 PZPP20742 1482 aa12.89□□□□□ -0.35
CHFR-211ENST00000535897 NEURL4Q96JN8 1562 aa12.89□□□□□ -0.35
CHFR-211ENST00000535897 TOM1O60784 492 aa12.88□□□□□ -0.35
CHFR-211ENST00000535897 FAM135AQ9P2D6 1515 aa12.88□□□□□ -0.35
CHFR-211ENST00000535897 NCOA2Q15596 1464 aa12.87□□□□□ -0.35
CHFR-211ENST00000535897 SHANK2Q9UPX8 1470 aa12.87□□□□□ -0.35
CHFR-211ENST00000535897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHFR-211ENST00000535897 HSPA1LP34931 641 aa12.87□□□□□ -0.35
CHFR-211ENST00000535897 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
CHFR-211ENST00000535897 THEMISQ8N1K5 641 aaPredicted RBP12.86□□□□□ -0.35
CHFR-211ENST00000535897 MED1Q15648 1581 aaPredicted RBP12.86□□□□□ -0.35
CHFR-211ENST00000535897 UGGT1Q9NYU2 1555 aa12.86□□□□□ -0.35
CHFR-211ENST00000535897 RSPH4AQ5TD94 716 aa12.85□□□□□ -0.35
CHFR-211ENST00000535897 NLRP1Q9C000 1473 aa12.85□□□□□ -0.35
CHFR-211ENST00000535897 TSPY4P0CV99 314 aa12.84□□□□□ -0.35
CHFR-211ENST00000535897 TSPY10P0CW01 314 aa12.84□□□□□ -0.35
CHFR-211ENST00000535897 MIA2Q96PC5 1412 aa12.84□□□□□ -0.35
CHFR-211ENST00000535897 VWDEQ8N2E2 1590 aa12.83□□□□□ -0.36
CHFR-211ENST00000535897 NPHP4O75161 1426 aaPredicted RBP12.83□□□□□ -0.36
CHFR-211ENST00000535897 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.36
CHFR-211ENST00000535897 IQGAP1P46940 1657 aa12.83□□□□□ -0.36
CHFR-211ENST00000535897 ARHGEF5Q12774 1597 aa12.82□□□□□ -0.36
CHFR-211ENST00000535897 PHF23Q9BUL5 403 aaPredicted RBP12.82□□□□□ -0.36
CHFR-211ENST00000535897 DEPDC5O75140 1603 aa12.81□□□□□ -0.36
CHFR-211ENST00000535897 ZC3H13Q5T200 1668 aaKnown RBP12.8□□□□□ -0.36
CHFR-211ENST00000535897 MED14O60244 1454 aa12.79□□□□□ -0.36
CHFR-211ENST00000535897 ABCC3O15438 1527 aa12.79□□□□□ -0.36
CHFR-211ENST00000535897 RNF17Q9BXT8 1623 aaKnown RBP12.79□□□□□ -0.36
CHFR-211ENST00000535897 SYNMO15061 1565 aa12.77□□□□□ -0.37
CHFR-211ENST00000535897 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.37
CHFR-211ENST00000535897 ERVK-7P63135 1459 aa12.76□□□□□ -0.37
CHFR-211ENST00000535897 MAST1Q9Y2H9 1570 aa12.76□□□□□ -0.37
CHFR-211ENST00000535897 CEP152O94986 1710 aa12.76□□□□□ -0.37
CHFR-211ENST00000535897 CFAP65Q6ZU64 1925 aaKnown RBP12.76□□□□□ -0.37
CHFR-211ENST00000535897 STRCP1A6NGW2 1772 aa12.75□□□□□ -0.37
CHFR-211ENST00000535897 LRRC9Q6ZRR7 1453 aa12.75□□□□□ -0.37
CHFR-211ENST00000535897 LRRC7Q96NW7 1537 aa12.75□□□□□ -0.37
CHFR-211ENST00000535897 ALKQ9UM73 1620 aa12.75□□□□□ -0.37
CHFR-211ENST00000535897 UBR1Q8IWV7 1749 aa12.74□□□□□ -0.37
CHFR-211ENST00000535897 MROH1Q8NDA8 1641 aa12.73□□□□□ -0.37
CHFR-211ENST00000535897 SCAF11Q99590 1463 aaKnown RBP12.72□□□□□ -0.37
CHFR-211ENST00000535897 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
CHFR-211ENST00000535897 DUOX2Q9NRD8 1548 aa12.72□□□□□ -0.37
CHFR-211ENST00000535897 MYOM3Q5VTT5 1437 aa12.71□□□□□ -0.38
CHFR-211ENST00000535897 TXNDC2Q86VQ3 553 aa12.7□□□□□ -0.38
CHFR-211ENST00000535897 KANK4Q5T7N3 995 aaPredicted RBP12.69□□□□□ -0.38
CHFR-211ENST00000535897 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
CHFR-211ENST00000535897 EID1Q9Y6B2 187 aa12.69□□□□□ -0.38
CHFR-211ENST00000535897 KIF15Q9NS87 1388 aa12.69□□□□□ -0.38
CHFR-211ENST00000535897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.384e-7■□□□□ 9.3
CHFR-211ENST00000535897 PRDM15P57071 1507 aaPredicted RBP12.67□□□□□ -0.38
CHFR-211ENST00000535897 PIK3C2BO00750 1634 aa12.67□□□□□ -0.38
CHFR-211ENST00000535897 LTKP29376 864 aa12.67□□□□□ -0.38
CHFR-211ENST00000535897 RRP7BPQ9NSQ0 103 aa12.67□□□□□ -0.38
CHFR-211ENST00000535897 SLIT1O75093 1534 aa12.67□□□□□ -0.38
CHFR-211ENST00000535897 CROCC2H7BZ55 1655 aa12.67□□□□□ -0.38
CHFR-211ENST00000535897 ARHGAP23Q9P227 1491 aa12.66□□□□□ -0.38
CHFR-211ENST00000535897 ERBINQ96RT1 1412 aa12.66□□□□□ -0.38
CHFR-211ENST00000535897 KANK1Q14678 1352 aa12.66□□□□□ -0.38
CHFR-211ENST00000535897 XIRP1Q702N8 1843 aaKnown RBP12.65□□□□□ -0.38
CHFR-211ENST00000535897 MAP3K1Q13233 1512 aa12.65□□□□□ -0.38
CHFR-211ENST00000535897 ARHGAP31Q2M1Z3 1444 aa12.64□□□□□ -0.39
CHFR-211ENST00000535897 LOC105371045A0A1W2PR82 267 aa12.64□□□□□ -0.39
CHFR-211ENST00000535897 PTPN23Q9H3S7 1636 aa12.63□□□□□ -0.39
CHFR-211ENST00000535897 TMEM2Q9UHN6 1383 aa12.63□□□□□ -0.39
CHFR-211ENST00000535897 ABCC5O15440 1437 aa12.62□□□□□ -0.39
CHFR-211ENST00000535897 EFCAB6Q5THR3 1501 aa12.62□□□□□ -0.39
CHFR-211ENST00000535897 APLP2Q06481 763 aa12.62□□□□□ -0.39
CHFR-211ENST00000535897 BCANQ96GW7 911 aa12.62□□□□□ -0.39
CHFR-211ENST00000535897 TMEM94Q12767 1356 aa12.61□□□□□ -0.39
CHFR-211ENST00000535897 DAPK1P53355 1430 aa12.61□□□□□ -0.39
CHFR-211ENST00000535897 SLC26A8Q96RN1 970 aa12.6□□□□□ -0.39
CHFR-211ENST00000535897 CHIC2Q9UKJ5 165 aa12.6□□□□□ -0.39
CHFR-211ENST00000535897 KDM5AP29375 1690 aaKnown RBP12.6□□□□□ -0.39
CHFR-211ENST00000535897 ROBO1Q9Y6N7 1651 aa12.59□□□□□ -0.39
CHFR-211ENST00000535897 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
CHFR-211ENST00000535897 RBM33Q96EV2 1170 aaKnown RBP12.59□□□□□ -0.39
CHFR-211ENST00000535897 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
CHFR-211ENST00000535897 FAM135BQ49AJ0 1406 aa12.59□□□□□ -0.39
CHFR-211ENST00000535897 ANKRD30AQ9BXX3 1397 aa12.58□□□□□ -0.4
CHFR-211ENST00000535897 IDI1Q13907 227 aa12.58□□□□□ -0.4
CHFR-211ENST00000535897 KCNA6P17658 529 aa12.57□□□□□ -0.4
CHFR-211ENST00000535897 ADGRB3O60242 1522 aa12.57□□□□□ -0.4
CHFR-211ENST00000535897 LMTK2Q8IWU2 1503 aa12.57□□□□□ -0.4
CHFR-211ENST00000535897 FGD6Q6ZV73 1430 aa12.56□□□□□ -0.4
CHFR-211ENST00000535897 MSH6P52701 1360 aa12.56□□□□□ -0.4
CHFR-211ENST00000535897 TET3O43151 1660 aa12.55□□□□□ -0.4
CHFR-211ENST00000535897 NKTRP30414 1462 aaKnown RBP12.55□□□□□ -0.4
CHFR-211ENST00000535897 PPP1R15AO75807 674 aaPredicted RBP12.54□□□□□ -0.4
CHFR-211ENST00000535897 NWD1Q149M9 1564 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms