RNA–Protein interactions for RNA: ENST00000535765.5

VPS37B-203, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-203ENST00000535765 NPATQ14207 1427 aa36.09■■■■□ 3.37
VPS37B-203ENST00000535765 FAM50AQ14320 339 aaKnown RBP36.09■■■■□ 3.37
VPS37B-203ENST00000535765 RNF17Q9BXT8 1623 aaKnown RBP36.08■■■■□ 3.37
VPS37B-203ENST00000535765 KIF15Q9NS87 1388 aa36.06■■■■□ 3.36
VPS37B-203ENST00000535765 ANKRD30AQ9BXX3 1397 aa36.05■■■■□ 3.36
VPS37B-203ENST00000535765 WASHC2CQ9Y4E1 1318 aa36.05■■■■□ 3.36
VPS37B-203ENST00000535765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.04■■■■□ 3.368e-6■■□□□ 11.9
VPS37B-203ENST00000535765 PPARGC1BQ86YN6 1023 aaKnown RBP36.04■■■■□ 3.36
VPS37B-203ENST00000535765 ADGRL2O95490 1459 aa36.04■■■■□ 3.36
VPS37B-203ENST00000535765 NCOA1Q15788 1441 aa36.02■■■■□ 3.36
VPS37B-203ENST00000535765 ERBINQ96RT1 1412 aa36.02■■■■□ 3.36
VPS37B-203ENST00000535765 RRP7BPQ9NSQ0 103 aa36.01■■■■□ 3.36
VPS37B-203ENST00000535765 KDM5DQ9BY66 1539 aa36.01■■■■□ 3.36
VPS37B-203ENST00000535765 PTPRKQ15262 1439 aa36■■■■□ 3.35
VPS37B-203ENST00000535765 CHIC2Q9UKJ5 165 aa35.98■■■■□ 3.35
VPS37B-203ENST00000535765 ZC3H13Q5T200 1668 aaKnown RBP35.95■■■■□ 3.35
VPS37B-203ENST00000535765 MROH1Q8NDA8 1641 aa35.94■■■■□ 3.34
VPS37B-203ENST00000535765 RRBP1Q9P2E9 1410 aaKnown RBP35.9■■■■□ 3.34
VPS37B-203ENST00000535765 DEPDC5O75140 1603 aa35.9■■■■□ 3.34
VPS37B-203ENST00000535765 FBXO31Q5XUX0 539 aaPredicted RBP35.89■■■■□ 3.34
VPS37B-203ENST00000535765 PZPP20742 1482 aa35.87■■■■□ 3.33
VPS37B-203ENST00000535765 DMRT2Q9Y5R5 561 aa35.87■■■■□ 3.33
VPS37B-203ENST00000535765 PRDM15P57071 1507 aaPredicted RBP35.87■■■■□ 3.33
VPS37B-203ENST00000535765 ABCC3O15438 1527 aa35.86■■■■□ 3.33
VPS37B-203ENST00000535765 ROCK1Q13464 1354 aa35.86■■■■□ 3.33
VPS37B-203ENST00000535765 MYO3AQ8NEV4 1616 aa35.83■■■■□ 3.33
VPS37B-203ENST00000535765 TNRQ92752 1358 aa35.82■■■■□ 3.32
VPS37B-203ENST00000535765 CEP152O94986 1710 aa35.81■■■■□ 3.32
VPS37B-203ENST00000535765 ANKRD50Q9ULJ7 1429 aa35.79■■■■□ 3.32
VPS37B-203ENST00000535765 CEP170BQ9Y4F5 1589 aaPredicted RBP35.79■■■■□ 3.32
VPS37B-203ENST00000535765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.78■■■■□ 3.32
VPS37B-203ENST00000535765 ZNF142P52746 1687 aaPredicted RBP35.78■■■■□ 3.32
VPS37B-203ENST00000535765 STRCQ7RTU9 1775 aa35.77■■■■□ 3.32
VPS37B-203ENST00000535765 ILDR1Q86SU0 546 aaPredicted RBP35.77■■■■□ 3.32
VPS37B-203ENST00000535765 CAMSAP1Q5T5Y3 1602 aa35.76■■■■□ 3.32
VPS37B-203ENST00000535765 KANK1Q14678 1352 aa35.75■■■■□ 3.31
VPS37B-203ENST00000535765 A2ML1A8K2U0 1454 aa35.74■■■■□ 3.31
VPS37B-203ENST00000535765 VWDEQ8N2E2 1590 aa35.74■■■■□ 3.31
VPS37B-203ENST00000535765 ARHGAP31Q2M1Z3 1444 aa35.72■■■■□ 3.31
VPS37B-203ENST00000535765 PTPRTO14522 1441 aa35.7■■■■□ 3.31
VPS37B-203ENST00000535765 LMTK2Q8IWU2 1503 aa35.7■■■■□ 3.31
VPS37B-203ENST00000535765 CFAP65Q6ZU64 1925 aaKnown RBP35.69■■■■□ 3.3
VPS37B-203ENST00000535765 NCKAP5LQ9HCH0 1330 aa35.68■■■■□ 3.3
VPS37B-203ENST00000535765 ITGAEP38570 1179 aa35.68■■■■□ 3.3
VPS37B-203ENST00000535765 SPATA31D1Q6ZQQ2 1576 aa35.68■■■■□ 3.3
VPS37B-203ENST00000535765 PLA2R1Q13018 1463 aa35.67■■■■□ 3.3
VPS37B-203ENST00000535765 NLRP1Q9C000 1473 aa35.65■■■■□ 3.3
VPS37B-203ENST00000535765 PKD2Q13563 968 aa35.64■■■■□ 3.3
VPS37B-203ENST00000535765 ERVK-7P63135 1459 aa35.63■■■■□ 3.29
VPS37B-203ENST00000535765 UNC13BO14795 1591 aa35.62■■■■□ 3.29
VPS37B-203ENST00000535765 THEMISQ8N1K5 641 aaPredicted RBP35.59■■■■□ 3.29
VPS37B-203ENST00000535765 CERKQ8TCT0 537 aa35.58■■■■□ 3.29
VPS37B-203ENST00000535765 FBXO41Q8TF61 875 aa35.58■■■■□ 3.29
VPS37B-203ENST00000535765 UGGT1Q9NYU2 1555 aa35.55■■■■□ 3.28
VPS37B-203ENST00000535765 EFCAB6Q5THR3 1501 aa35.54■■■■□ 3.28
VPS37B-203ENST00000535765 TET3O43151 1660 aa35.52■■■■□ 3.28
VPS37B-203ENST00000535765 GCC2Q8IWJ2 1684 aa35.49■■■■□ 3.27
VPS37B-203ENST00000535765 RPRD2Q5VT52 1461 aaKnown RBP35.49■■■■□ 3.27
VPS37B-203ENST00000535765 ANKLE2Q86XL3 938 aa35.49■■■■□ 3.27
VPS37B-203ENST00000535765 IQGAP3Q86VI3 1631 aa35.48■■■■□ 3.27
VPS37B-203ENST00000535765 NAIPQ13075 1403 aa35.46■■■■□ 3.27
VPS37B-203ENST00000535765 HFM1A2PYH4 1435 aa35.42■■■■□ 3.26
VPS37B-203ENST00000535765 NOS1P29475 1434 aa35.42■■■■□ 3.26
VPS37B-203ENST00000535765 UBR1Q8IWV7 1749 aa35.4■■■■□ 3.26
VPS37B-203ENST00000535765 NUP155O75694 1391 aa35.39■■■■□ 3.26
VPS37B-203ENST00000535765 POLR1AO95602 1720 aaPredicted RBP35.39■■■■□ 3.26
VPS37B-203ENST00000535765 ZNF335Q9H4Z2 1342 aaPredicted RBP35.38■■■■□ 3.25
VPS37B-203ENST00000535765 KDM5AP29375 1690 aaKnown RBP35.38■■■■□ 3.25
VPS37B-203ENST00000535765 LTBP4Q8N2S1 1624 aa35.36■■■■□ 3.25
VPS37B-203ENST00000535765 SYNMO15061 1565 aa35.36■■■■□ 3.25
VPS37B-203ENST00000535765 STAG3Q9UJ98 1225 aa35.36■■■■□ 3.25
VPS37B-203ENST00000535765 E9PCH4 1651 aa35.36■■■■□ 3.25
VPS37B-203ENST00000535765 NEURL4Q96JN8 1562 aa35.35■■■■□ 3.25
VPS37B-203ENST00000535765 IDI1Q13907 227 aa35.33■■■■□ 3.25
VPS37B-203ENST00000535765 PIK3C2BO00750 1634 aa35.32■■■■□ 3.25
VPS37B-203ENST00000535765 SLC52A1Q9NWF4 448 aa35.32■■■■□ 3.24
VPS37B-203ENST00000535765 NPHP4O75161 1426 aaPredicted RBP35.32■■■■□ 3.24
VPS37B-203ENST00000535765 MED14O60244 1454 aa35.29■■■■□ 3.24
VPS37B-203ENST00000535765 TXNDC2Q86VQ3 553 aa35.25■■■■□ 3.23
VPS37B-203ENST00000535765 EID1Q9Y6B2 187 aa35.25■■■■□ 3.23
VPS37B-203ENST00000535765 SLIT1O75093 1534 aa35.25■■■■□ 3.23
VPS37B-203ENST00000535765 ARHGAP23Q9P227 1491 aa35.23■■■■□ 3.23
VPS37B-203ENST00000535765 SCAF11Q99590 1463 aaKnown RBP35.22■■■■□ 3.23
VPS37B-203ENST00000535765 LTKP29376 864 aa35.21■■■■□ 3.23
VPS37B-203ENST00000535765 TMEM2Q9UHN6 1383 aa35.21■■■■□ 3.23
VPS37B-203ENST00000535765 IQSEC2Q5JU85 1478 aa35.19■■■■□ 3.22
VPS37B-203ENST00000535765 ADGRB3O60242 1522 aa35.18■■■■□ 3.22
VPS37B-203ENST00000535765 IQGAP1P46940 1657 aa35.17■■■■□ 3.22
VPS37B-203ENST00000535765 ACIN1Q9UKV3 1341 aaKnown RBP35.15■■■■□ 3.22
VPS37B-203ENST00000535765 SPHKAPQ2M3C7 1700 aa35.15■■■■□ 3.22
VPS37B-203ENST00000535765 MYO5BQ9ULV0 1848 aa35.12■■■■□ 3.21
VPS37B-203ENST00000535765 TMEM131LA2VDJ0 1609 aa35.11■■■■□ 3.21
VPS37B-203ENST00000535765 TRIM52Q96A61 297 aa35.11■■■■□ 3.21
VPS37B-203ENST00000535765 CPS1P31327 1500 aa35.09■■■■□ 3.21
VPS37B-203ENST00000535765 CHGAP10645 457 aaKnown RBP35.07■■■■□ 3.2
VPS37B-203ENST00000535765 SETD5Q9C0A6 1442 aa35.06■■■■□ 3.2
VPS37B-203ENST00000535765 UBAP1LF5GYI3 381 aa35.02■■■■□ 3.2
VPS37B-203ENST00000535765 SLC4A1APQ9BWU0 796 aaKnown RBP35.02■■■■□ 3.2
VPS37B-203ENST00000535765 HDGFP51858 240 aaKnown RBP35.01■■■■□ 3.2
VPS37B-203ENST00000535765 TRPM2O94759 1503 aa35■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms