RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 TRIM26Q12899 539 aaPredicted RBP13.36□□□□□ -0.27
CD4-204ENST00000535707 NCOA1Q15788 1441 aa13.36□□□□□ -0.27
CD4-204ENST00000535707 PTPRKQ15262 1439 aa13.35□□□□□ -0.27
CD4-204ENST00000535707 DIP2CQ9Y2E4 1556 aa13.35□□□□□ -0.27
CD4-204ENST00000535707 HAP1P54257 671 aaPredicted RBP13.34□□□□□ -0.27
CD4-204ENST00000535707 ABCA6Q8N139 1617 aa13.34□□□□□ -0.27
CD4-204ENST00000535707 ATP10AO60312 1499 aa13.34□□□□□ -0.27
CD4-204ENST00000535707 ACIN1Q9UKV3 1341 aaKnown RBP13.34□□□□□ -0.27
CD4-204ENST00000535707 DUOX2Q9NRD8 1548 aa13.34□□□□□ -0.27
CD4-204ENST00000535707 FBXO3Q9UK99 471 aa13.33□□□□□ -0.28
CD4-204ENST00000535707 BCORL1Q5H9F3 1711 aa13.33□□□□□ -0.28
CD4-204ENST00000535707 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
CD4-204ENST00000535707 AGLP35573 1532 aa13.32□□□□□ -0.28
CD4-204ENST00000535707 HFM1A2PYH4 1435 aa13.31□□□□□ -0.28
CD4-204ENST00000535707 ERBINQ96RT1 1412 aa13.31□□□□□ -0.28
CD4-204ENST00000535707 DHX29Q7Z478 1369 aaKnown RBP13.31□□□□□ -0.28
CD4-204ENST00000535707 GCC2Q8IWJ2 1684 aa13.31□□□□□ -0.28
CD4-204ENST00000535707 YEATS2Q9ULM3 1422 aa13.3□□□□□ -0.28
CD4-204ENST00000535707 A2MP01023 1474 aa13.3□□□□□ -0.28
CD4-204ENST00000535707 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
CD4-204ENST00000535707 KIF15Q9NS87 1388 aa13.3□□□□□ -0.28
CD4-204ENST00000535707 NAIPQ13075 1403 aa13.28□□□□□ -0.28
CD4-204ENST00000535707 BCANQ96GW7 911 aa13.27□□□□□ -0.29
CD4-204ENST00000535707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.29
CD4-204ENST00000535707 FAM135AQ9P2D6 1515 aa13.27□□□□□ -0.29
CD4-204ENST00000535707 HRCP23327 699 aa13.26□□□□□ -0.29
CD4-204ENST00000535707 ITGAEP38570 1179 aa13.26□□□□□ -0.29
CD4-204ENST00000535707 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
CD4-204ENST00000535707 ANKRD50Q9ULJ7 1429 aa13.26□□□□□ -0.29
CD4-204ENST00000535707 CHIC2Q9UKJ5 165 aa13.25□□□□□ -0.29
CD4-204ENST00000535707 DEPDC5O75140 1603 aa13.24□□□□□ -0.29
CD4-204ENST00000535707 RNF17Q9BXT8 1623 aaKnown RBP13.24□□□□□ -0.29
CD4-204ENST00000535707 RRP7BPQ9NSQ0 103 aa13.24□□□□□ -0.29
CD4-204ENST00000535707 SETD5Q9C0A6 1442 aa13.22□□□□□ -0.29
CD4-204ENST00000535707 PRKCSHP14314 528 aaPredicted RBP13.22□□□□□ -0.29
CD4-204ENST00000535707 UNC13BO14795 1591 aa13.22□□□□□ -0.29
CD4-204ENST00000535707 PRDM15P57071 1507 aaPredicted RBP13.21□□□□□ -0.29
CD4-204ENST00000535707 SIGLEC1Q9BZZ2 1709 aa13.2□□□□□ -0.3
CD4-204ENST00000535707 KDM5DQ9BY66 1539 aa13.19□□□□□ -0.3
CD4-204ENST00000535707 ZC3H13Q5T200 1668 aaKnown RBP13.19□□□□□ -0.3
CD4-204ENST00000535707 MROH1Q8NDA8 1641 aa13.18□□□□□ -0.3
CD4-204ENST00000535707 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
CD4-204ENST00000535707 VWDEQ8N2E2 1590 aa13.18□□□□□ -0.3
CD4-204ENST00000535707 LMTK2Q8IWU2 1503 aa13.17□□□□□ -0.3
CD4-204ENST00000535707 KIF3BO15066 747 aa13.16□□□□□ -0.3
CD4-204ENST00000535707 IQGAP3Q86VI3 1631 aa13.16□□□□□ -0.3
CD4-204ENST00000535707 RAB3GAP2Q9H2M9 1393 aa13.16□□□□□ -0.3
CD4-204ENST00000535707 CNTLNQ9NXG0 1405 aa13.15□□□□□ -0.3
CD4-204ENST00000535707 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
CD4-204ENST00000535707 KANK1Q14678 1352 aa13.15□□□□□ -0.3
CD4-204ENST00000535707 VASPP50552 380 aaPredicted RBP13.14□□□□□ -0.31
CD4-204ENST00000535707 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
CD4-204ENST00000535707 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
CD4-204ENST00000535707 ADAMTSL3P82987 1691 aa13.14□□□□□ -0.31
CD4-204ENST00000535707 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
CD4-204ENST00000535707 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
CD4-204ENST00000535707 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
CD4-204ENST00000535707 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
CD4-204ENST00000535707 ABCC3O15438 1527 aa13.12□□□□□ -0.31
CD4-204ENST00000535707 PCGF6Q9BYE7 350 aa13.11□□□□□ -0.31
CD4-204ENST00000535707 ARHGAP31Q2M1Z3 1444 aa13.11□□□□□ -0.31
CD4-204ENST00000535707 TET3O43151 1660 aa13.11□□□□□ -0.31
CD4-204ENST00000535707 RPRD2Q5VT52 1461 aaKnown RBP13.1□□□□□ -0.31
CD4-204ENST00000535707 FER1L4A9Z1Z3 1794 aa13.1□□□□□ -0.31
CD4-204ENST00000535707 GGT6Q6P531 493 aa13.1□□□□□ -0.31
CD4-204ENST00000535707 NUP155O75694 1391 aa13.09□□□□□ -0.31
CD4-204ENST00000535707 CAMSAP1Q5T5Y3 1602 aa13.09□□□□□ -0.31
CD4-204ENST00000535707 WASHC2CQ9Y4E1 1318 aa13.09□□□□□ -0.31
CD4-204ENST00000535707 EFCAB6Q5THR3 1501 aa13.08□□□□□ -0.31
CD4-204ENST00000535707 PZPP20742 1482 aa13.08□□□□□ -0.32
CD4-204ENST00000535707 ESF1Q9H501 851 aaKnown RBP13.07□□□□□ -0.32
CD4-204ENST00000535707 CLTCQ00610 1675 aaKnown RBP13.07□□□□□ -0.32
CD4-204ENST00000535707 CEP152O94986 1710 aa13.07□□□□□ -0.32
CD4-204ENST00000535707 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
CD4-204ENST00000535707 TRIM52Q96A61 297 aa13.04□□□□□ -0.32
CD4-204ENST00000535707 ZMYM3Q14202 1370 aa13.04□□□□□ -0.32
CD4-204ENST00000535707 NPATQ14207 1427 aa13.04□□□□□ -0.32
CD4-204ENST00000535707 E9PCH4 1651 aa13.03□□□□□ -0.32
CD4-204ENST00000535707 MLECQ14165 292 aa13.03□□□□□ -0.32
CD4-204ENST00000535707 IFNLR1Q8IU57 520 aaPredicted RBP13.03□□□□□ -0.32
CD4-204ENST00000535707 MPHOSPH9Q99550 1183 aa13.03□□□□□ -0.32
CD4-204ENST00000535707 C3P01024 1663 aa13.02□□□□□ -0.32
CD4-204ENST00000535707 RIMS1Q86UR5 1692 aaKnown RBP13.02□□□□□ -0.32
CD4-204ENST00000535707 PROM2Q8N271 834 aa13.02□□□□□ -0.33
CD4-204ENST00000535707 SPATA31D1Q6ZQQ2 1576 aa13.02□□□□□ -0.33
CD4-204ENST00000535707 PTPRMP28827 1452 aa13.01□□□□□ -0.33
CD4-204ENST00000535707 PREX1Q8TCU6 1659 aa13□□□□□ -0.33
CD4-204ENST00000535707 PTPRTO14522 1441 aa13□□□□□ -0.33
CD4-204ENST00000535707 NOS1P29475 1434 aa13□□□□□ -0.33
CD4-204ENST00000535707 TRPM2O94759 1503 aa12.98□□□□□ -0.33
CD4-204ENST00000535707 ERVK-7P63135 1459 aa12.98□□□□□ -0.33
CD4-204ENST00000535707 DHX57Q6P158 1386 aaKnown RBP12.98□□□□□ -0.33
CD4-204ENST00000535707 CLSPNQ9HAW4 1339 aa12.98□□□□□ -0.33
CD4-204ENST00000535707 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
CD4-204ENST00000535707 PKD2Q13563 968 aa12.98□□□□□ -0.33
CD4-204ENST00000535707 SPHKAPQ2M3C7 1700 aa12.98□□□□□ -0.33
CD4-204ENST00000535707 KDM5AP29375 1690 aaKnown RBP12.96□□□□□ -0.33
CD4-204ENST00000535707 NEURL4Q96JN8 1562 aa12.96□□□□□ -0.33
CD4-204ENST00000535707 NLRP1Q9C000 1473 aa12.96□□□□□ -0.34
CD4-204ENST00000535707 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms