RNA–Protein interactions for RNA: ENST00000535021.5

LPCAT3-202, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-202ENST00000535021 MAGI2Q86UL8 1455 aa13.19□□□□□ -0.3
LPCAT3-202ENST00000535021 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
LPCAT3-202ENST00000535021 DIP2CQ9Y2E4 1556 aa13.19□□□□□ -0.3
LPCAT3-202ENST00000535021 EIF2AK4Q9P2K8 1649 aaKnown RBP13.17□□□□□ -0.3
LPCAT3-202ENST00000535021 UNC13BO14795 1591 aa13.17□□□□□ -0.3
LPCAT3-202ENST00000535021 KDM5DQ9BY66 1539 aa13.16□□□□□ -0.3
LPCAT3-202ENST00000535021 DHX29Q7Z478 1369 aaKnown RBP13.16□□□□□ -0.3
LPCAT3-202ENST00000535021 A2MP01023 1474 aa13.16□□□□□ -0.3
LPCAT3-202ENST00000535021 YEATS2Q9ULM3 1422 aa13.15□□□□□ -0.3
LPCAT3-202ENST00000535021 MYT1LQ9UL68 1186 aa13.15□□□□□ -0.3
LPCAT3-202ENST00000535021 BCORL1Q5H9F3 1711 aa13.15□□□□□ -0.3
LPCAT3-202ENST00000535021 DEPDC5O75140 1603 aa13.14□□□□□ -0.31
LPCAT3-202ENST00000535021 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
LPCAT3-202ENST00000535021 REREQ9P2R6 1566 aa13.14□□□□□ -0.31
LPCAT3-202ENST00000535021 ARHGEF40Q8TER5 1519 aa13.13□□□□□ -0.31
LPCAT3-202ENST00000535021 PZPP20742 1482 aa13.12□□□□□ -0.31
LPCAT3-202ENST00000535021 IQGAP3Q86VI3 1631 aa13.11□□□□□ -0.31
LPCAT3-202ENST00000535021 RNF17Q9BXT8 1623 aaKnown RBP13.11□□□□□ -0.31
LPCAT3-202ENST00000535021 TRIM52Q96A61 297 aa13.11□□□□□ -0.31
LPCAT3-202ENST00000535021 CLSPNQ9HAW4 1339 aa13.11□□□□□ -0.31
LPCAT3-202ENST00000535021 ATP10AO60312 1499 aa13.1□□□□□ -0.31
LPCAT3-202ENST00000535021 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
LPCAT3-202ENST00000535021 PRDM15P57071 1507 aaPredicted RBP13.1□□□□□ -0.31
LPCAT3-202ENST00000535021 NUP155O75694 1391 aa13.09□□□□□ -0.31
LPCAT3-202ENST00000535021 VWDEQ8N2E2 1590 aa13.09□□□□□ -0.31
LPCAT3-202ENST00000535021 FAM135AQ9P2D6 1515 aa13.08□□□□□ -0.31
LPCAT3-202ENST00000535021 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
LPCAT3-202ENST00000535021 AGLP35573 1532 aa13.08□□□□□ -0.32
LPCAT3-202ENST00000535021 KIF3BO15066 747 aa13.06□□□□□ -0.32
LPCAT3-202ENST00000535021 SIGLEC1Q9BZZ2 1709 aa13.05□□□□□ -0.32
LPCAT3-202ENST00000535021 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
LPCAT3-202ENST00000535021 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
LPCAT3-202ENST00000535021 LMTK2Q8IWU2 1503 aa13.03□□□□□ -0.32
LPCAT3-202ENST00000535021 TET3O43151 1660 aa13.03□□□□□ -0.32
LPCAT3-202ENST00000535021 KANK1Q14678 1352 aa13.03□□□□□ -0.32
LPCAT3-202ENST00000535021 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.33
LPCAT3-202ENST00000535021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.33
LPCAT3-202ENST00000535021 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.33
LPCAT3-202ENST00000535021 PKD2Q13563 968 aa13.01□□□□□ -0.33
LPCAT3-202ENST00000535021 CEP152O94986 1710 aa13.01□□□□□ -0.33
LPCAT3-202ENST00000535021 E9PCH4 1651 aa13□□□□□ -0.33
LPCAT3-202ENST00000535021 ABCC3O15438 1527 aa13□□□□□ -0.33
LPCAT3-202ENST00000535021 ANKRD30BQ9BXX2 1392 aa13□□□□□ -0.33
LPCAT3-202ENST00000535021 EFCAB6Q5THR3 1501 aa12.99□□□□□ -0.33
LPCAT3-202ENST00000535021 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
LPCAT3-202ENST00000535021 DCAF8L1A6NGE4 600 aa12.98□□□□□ -0.33
LPCAT3-202ENST00000535021 GGT6Q6P531 493 aa12.98□□□□□ -0.33
LPCAT3-202ENST00000535021 CAMSAP1Q5T5Y3 1602 aa12.97□□□□□ -0.33
LPCAT3-202ENST00000535021 SIN3AQ96ST3 1273 aa12.95□□□□□ -0.34
LPCAT3-202ENST00000535021 SPHKAPQ2M3C7 1700 aa12.95□□□□□ -0.34
LPCAT3-202ENST00000535021 RPRD2Q5VT52 1461 aaKnown RBP12.95□□□□□ -0.34
LPCAT3-202ENST00000535021 WASHC2CQ9Y4E1 1318 aa12.94□□□□□ -0.34
LPCAT3-202ENST00000535021 PLA2R1Q13018 1463 aa12.94□□□□□ -0.34
LPCAT3-202ENST00000535021 PTPRTO14522 1441 aa12.94□□□□□ -0.34
LPCAT3-202ENST00000535021 ARHGAP31Q2M1Z3 1444 aa12.94□□□□□ -0.34
LPCAT3-202ENST00000535021 NPATQ14207 1427 aa12.93□□□□□ -0.34
LPCAT3-202ENST00000535021 TRPM2O94759 1503 aa12.93□□□□□ -0.34
LPCAT3-202ENST00000535021 KCNA4P22459 653 aa12.92□□□□□ -0.34
LPCAT3-202ENST00000535021 CLTCQ00610 1675 aaKnown RBP12.92□□□□□ -0.34
LPCAT3-202ENST00000535021 TIMELESSQ9UNS1 1208 aa12.91□□□□□ -0.34
LPCAT3-202ENST00000535021 ARID4BQ4LE39 1312 aaPredicted RBP12.9□□□□□ -0.34
LPCAT3-202ENST00000535021 NEUROD1Q13562 356 aa12.9□□□□□ -0.34
LPCAT3-202ENST00000535021 CCDC144AA2RUR9 1427 aa12.89□□□□□ -0.35
LPCAT3-202ENST00000535021 MLECQ14165 292 aa12.89□□□□□ -0.35
LPCAT3-202ENST00000535021 MROH2AA6NES4 1674 aa12.89□□□□□ -0.35
LPCAT3-202ENST00000535021 NOS1P29475 1434 aa12.88□□□□□ -0.35
LPCAT3-202ENST00000535021 CNTLNQ9NXG0 1405 aa12.88□□□□□ -0.35
LPCAT3-202ENST00000535021 CLTCL1P53675 1640 aa12.88□□□□□ -0.35
LPCAT3-202ENST00000535021 FER1L4A9Z1Z3 1794 aa12.87□□□□□ -0.35
LPCAT3-202ENST00000535021 PREX1Q8TCU6 1659 aa12.87□□□□□ -0.35
LPCAT3-202ENST00000535021 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
LPCAT3-202ENST00000535021 CFAP65Q6ZU64 1925 aaKnown RBP12.86□□□□□ -0.35
LPCAT3-202ENST00000535021 SYNMO15061 1565 aa12.86□□□□□ -0.35
LPCAT3-202ENST00000535021 PIK3C2BO00750 1634 aa12.85□□□□□ -0.35
LPCAT3-202ENST00000535021 SPATA31D1Q6ZQQ2 1576 aa12.85□□□□□ -0.35
LPCAT3-202ENST00000535021 NEURL4Q96JN8 1562 aa12.85□□□□□ -0.35
LPCAT3-202ENST00000535021 ERVK-7P63135 1459 aa12.85□□□□□ -0.35
LPCAT3-202ENST00000535021 UGGT1Q9NYU2 1555 aa12.84□□□□□ -0.35
LPCAT3-202ENST00000535021 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.35
LPCAT3-202ENST00000535021 SPATA31E1Q6ZUB1 1445 aa12.83□□□□□ -0.36
LPCAT3-202ENST00000535021 ESF1Q9H501 851 aaKnown RBP12.83□□□□□ -0.36
LPCAT3-202ENST00000535021 KIF1BO60333 1816 aa12.83□□□□□ -0.36
LPCAT3-202ENST00000535021 ZMYM3Q14202 1370 aa12.82□□□□□ -0.36
LPCAT3-202ENST00000535021 MADDQ8WXG6 1647 aa12.82□□□□□ -0.36
LPCAT3-202ENST00000535021 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
LPCAT3-202ENST00000535021 C3P01024 1663 aa12.81□□□□□ -0.36
LPCAT3-202ENST00000535021 L3MBTL2Q969R5 705 aa12.81□□□□□ -0.36
LPCAT3-202ENST00000535021 ADGRB3O60242 1522 aa12.8□□□□□ -0.36
LPCAT3-202ENST00000535021 PPP1R15AO75807 674 aaPredicted RBP12.8□□□□□ -0.36
LPCAT3-202ENST00000535021 HOXD11P31277 338 aaPredicted RBP12.8□□□□□ -0.36
LPCAT3-202ENST00000535021 FBXO31Q5XUX0 539 aaPredicted RBP12.79□□□□□ -0.36
LPCAT3-202ENST00000535021 RIMS1Q86UR5 1692 aaKnown RBP12.79□□□□□ -0.36
LPCAT3-202ENST00000535021 SLC52A1Q9NWF4 448 aa12.78□□□□□ -0.36
LPCAT3-202ENST00000535021 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
LPCAT3-202ENST00000535021 UHRF1BP1Q6BDS2 1440 aa12.76□□□□□ -0.37
LPCAT3-202ENST00000535021 IFT172Q9UG01 1749 aa12.76□□□□□ -0.37
LPCAT3-202ENST00000535021 TMEM131LA2VDJ0 1609 aa12.75□□□□□ -0.37
LPCAT3-202ENST00000535021 TNRQ92752 1358 aa12.75□□□□□ -0.37
LPCAT3-202ENST00000535021 IDI1Q13907 227 aa12.74□□□□□ -0.37
LPCAT3-202ENST00000535021 KDM5AP29375 1690 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms