RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 CHIC2Q9UKJ5 165 aa27.65■■■□□ 2.02
CAPRIN1-217ENST00000534825 PTPRKQ15262 1439 aa27.65■■■□□ 2.02
CAPRIN1-217ENST00000534825 DNMT1P26358 1616 aaKnown RBP27.64■■■□□ 2.02
CAPRIN1-217ENST00000534825 KIF15Q9NS87 1388 aa27.63■■■□□ 2.01
CAPRIN1-217ENST00000534825 DUOX2Q9NRD8 1548 aa27.62■■■□□ 2.01
CAPRIN1-217ENST00000534825 FBXO31Q5XUX0 539 aaPredicted RBP27.59■■■□□ 2.01
CAPRIN1-217ENST00000534825 NCOA1Q15788 1441 aa27.58■■■□□ 2.01
CAPRIN1-217ENST00000534825 CROCC2H7BZ55 1655 aa27.58■■■□□ 2.01
CAPRIN1-217ENST00000534825 ANKRD30AQ9BXX3 1397 aa27.58■■■□□ 2.01
CAPRIN1-217ENST00000534825 KDM5DQ9BY66 1539 aa27.57■■■□□ 2
CAPRIN1-217ENST00000534825 FAM135AQ9P2D6 1515 aa27.57■■■□□ 2
CAPRIN1-217ENST00000534825 RNF17Q9BXT8 1623 aaKnown RBP27.54■■■□□ 2
CAPRIN1-217ENST00000534825 EIF2AK4Q9P2K8 1649 aaKnown RBP27.54■■■□□ 2
CAPRIN1-217ENST00000534825 ERBINQ96RT1 1412 aa27.53■■■□□ 2
CAPRIN1-217ENST00000534825 PZPP20742 1482 aa27.51■■■□□ 2
CAPRIN1-217ENST00000534825 ADGRL2O95490 1459 aa27.51■■□□□ 1.99
CAPRIN1-217ENST00000534825 MROH1Q8NDA8 1641 aa27.5■■□□□ 1.99
CAPRIN1-217ENST00000534825 ABCC3O15438 1527 aa27.48■■□□□ 1.99
CAPRIN1-217ENST00000534825 DMRT2Q9Y5R5 561 aa27.47■■□□□ 1.99
CAPRIN1-217ENST00000534825 TNRQ92752 1358 aa27.47■■□□□ 1.99
CAPRIN1-217ENST00000534825 STRCQ7RTU9 1775 aa27.46■■□□□ 1.99
CAPRIN1-217ENST00000534825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.46■■□□□ 1.998e-21■■■□□ 17.3
CAPRIN1-217ENST00000534825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.45■■□□□ 1.98
CAPRIN1-217ENST00000534825 MYO3AQ8NEV4 1616 aa27.41■■□□□ 1.98
CAPRIN1-217ENST00000534825 A2ML1A8K2U0 1454 aa27.4■■□□□ 1.98
CAPRIN1-217ENST00000534825 PRDM15P57071 1507 aaPredicted RBP27.4■■□□□ 1.98
CAPRIN1-217ENST00000534825 CEP170BQ9Y4F5 1589 aaPredicted RBP27.39■■□□□ 1.98
CAPRIN1-217ENST00000534825 CAMSAP1Q5T5Y3 1602 aa27.39■■□□□ 1.98
CAPRIN1-217ENST00000534825 ANKRD50Q9ULJ7 1429 aa27.39■■□□□ 1.97
CAPRIN1-217ENST00000534825 ZC3H13Q5T200 1668 aaKnown RBP27.38■■□□□ 1.97
CAPRIN1-217ENST00000534825 ILDR1Q86SU0 546 aaPredicted RBP27.38■■□□□ 1.97
CAPRIN1-217ENST00000534825 NCKAP5LQ9HCH0 1330 aa27.38■■□□□ 1.97
CAPRIN1-217ENST00000534825 ROCK1Q13464 1354 aa27.37■■□□□ 1.97
CAPRIN1-217ENST00000534825 PTPRTO14522 1441 aa27.37■■□□□ 1.97
CAPRIN1-217ENST00000534825 ITGAEP38570 1179 aa27.37■■□□□ 1.97
CAPRIN1-217ENST00000534825 ZNF142P52746 1687 aaPredicted RBP27.36■■□□□ 1.97
CAPRIN1-217ENST00000534825 ARHGAP31Q2M1Z3 1444 aa27.36■■□□□ 1.97
CAPRIN1-217ENST00000534825 DEPDC5O75140 1603 aa27.36■■□□□ 1.97
CAPRIN1-217ENST00000534825 KANK1Q14678 1352 aa27.35■■□□□ 1.97
CAPRIN1-217ENST00000534825 PKD2Q13563 968 aa27.35■■□□□ 1.97
CAPRIN1-217ENST00000534825 RRBP1Q9P2E9 1410 aaKnown RBP27.34■■□□□ 1.97
CAPRIN1-217ENST00000534825 CEP152O94986 1710 aa27.33■■□□□ 1.97
CAPRIN1-217ENST00000534825 ERVK-7P63135 1459 aa27.33■■□□□ 1.97
CAPRIN1-217ENST00000534825 PLA2R1Q13018 1463 aa27.33■■□□□ 1.97
CAPRIN1-217ENST00000534825 SPATA31D1Q6ZQQ2 1576 aa27.33■■□□□ 1.97
CAPRIN1-217ENST00000534825 NLRP1Q9C000 1473 aa27.32■■□□□ 1.96
CAPRIN1-217ENST00000534825 VWDEQ8N2E2 1590 aa27.32■■□□□ 1.96
CAPRIN1-217ENST00000534825 THEMISQ8N1K5 641 aaPredicted RBP27.31■■□□□ 1.96
CAPRIN1-217ENST00000534825 LMTK2Q8IWU2 1503 aa27.3■■□□□ 1.96
CAPRIN1-217ENST00000534825 CERKQ8TCT0 537 aa27.27■■□□□ 1.96
CAPRIN1-217ENST00000534825 CFAP65Q6ZU64 1925 aaKnown RBP27.26■■□□□ 1.95
CAPRIN1-217ENST00000534825 FBXO41Q8TF61 875 aa27.24■■□□□ 1.95
CAPRIN1-217ENST00000534825 UGGT1Q9NYU2 1555 aa27.23■■□□□ 1.95
CAPRIN1-217ENST00000534825 ANKLE2Q86XL3 938 aa27.22■■□□□ 1.95
CAPRIN1-217ENST00000534825 IDI1Q13907 227 aa27.18■■□□□ 1.94
CAPRIN1-217ENST00000534825 NOS1P29475 1434 aa27.17■■□□□ 1.94
CAPRIN1-217ENST00000534825 EFCAB6Q5THR3 1501 aa27.16■■□□□ 1.94
CAPRIN1-217ENST00000534825 ZNF335Q9H4Z2 1342 aaPredicted RBP27.14■■□□□ 1.93
CAPRIN1-217ENST00000534825 UNC13BO14795 1591 aa27.14■■□□□ 1.93
CAPRIN1-217ENST00000534825 NUP155O75694 1391 aa27.13■■□□□ 1.93
CAPRIN1-217ENST00000534825 LTBP4Q8N2S1 1624 aa27.13■■□□□ 1.93
CAPRIN1-217ENST00000534825 NEURL4Q96JN8 1562 aa27.11■■□□□ 1.93
CAPRIN1-217ENST00000534825 SLC52A1Q9NWF4 448 aa27.11■■□□□ 1.93
CAPRIN1-217ENST00000534825 RPRD2Q5VT52 1461 aaKnown RBP27.11■■□□□ 1.93
CAPRIN1-217ENST00000534825 MED14O60244 1454 aa27.1■■□□□ 1.93
CAPRIN1-217ENST00000534825 NAIPQ13075 1403 aa27.09■■□□□ 1.93
CAPRIN1-217ENST00000534825 LTKP29376 864 aa27.09■■□□□ 1.93
CAPRIN1-217ENST00000534825 UBR1Q8IWV7 1749 aa27.08■■□□□ 1.93
CAPRIN1-217ENST00000534825 SYNMO15061 1565 aa27.08■■□□□ 1.93
CAPRIN1-217ENST00000534825 TET3O43151 1660 aa27.07■■□□□ 1.92
CAPRIN1-217ENST00000534825 NPHP4O75161 1426 aaPredicted RBP27.07■■□□□ 1.92
CAPRIN1-217ENST00000534825 TXNDC2Q86VQ3 553 aa27.06■■□□□ 1.92
CAPRIN1-217ENST00000534825 STAG3Q9UJ98 1225 aa27.06■■□□□ 1.92
CAPRIN1-217ENST00000534825 ARHGAP23Q9P227 1491 aa27.06■■□□□ 1.92
CAPRIN1-217ENST00000534825 PIK3C2BO00750 1634 aa27.04■■□□□ 1.92
CAPRIN1-217ENST00000534825 SLIT1O75093 1534 aa27.03■■□□□ 1.92
CAPRIN1-217ENST00000534825 POLR1AO95602 1720 aaPredicted RBP27.03■■□□□ 1.92
CAPRIN1-217ENST00000534825 IQGAP3Q86VI3 1631 aa27.03■■□□□ 1.92
CAPRIN1-217ENST00000534825 TMEM2Q9UHN6 1383 aa27.03■■□□□ 1.92
CAPRIN1-217ENST00000534825 HFM1A2PYH4 1435 aa27■■□□□ 1.91
CAPRIN1-217ENST00000534825 EID1Q9Y6B2 187 aa27■■□□□ 1.91
CAPRIN1-217ENST00000534825 SCAF11Q99590 1463 aaKnown RBP27■■□□□ 1.91
CAPRIN1-217ENST00000534825 GCC2Q8IWJ2 1684 aa26.99■■□□□ 1.91
CAPRIN1-217ENST00000534825 E9PCH4 1651 aa26.98■■□□□ 1.91
CAPRIN1-217ENST00000534825 KDM5AP29375 1690 aaKnown RBP26.95■■□□□ 1.91
CAPRIN1-217ENST00000534825 IQSEC2Q5JU85 1478 aa26.93■■□□□ 1.9
CAPRIN1-217ENST00000534825 IQGAP1P46940 1657 aa26.92■■□□□ 1.9
CAPRIN1-217ENST00000534825 ADGRB3O60242 1522 aa26.91■■□□□ 1.9
CAPRIN1-217ENST00000534825 TRIM52Q96A61 297 aa26.9■■□□□ 1.9
CAPRIN1-217ENST00000534825 CHGAP10645 457 aaKnown RBP26.87■■□□□ 1.89
CAPRIN1-217ENST00000534825 TMEM131LA2VDJ0 1609 aa26.86■■□□□ 1.89
CAPRIN1-217ENST00000534825 CPS1P31327 1500 aa26.85■■□□□ 1.89
CAPRIN1-217ENST00000534825 ZFYVE9O95405 1425 aa26.85■■□□□ 1.89
CAPRIN1-217ENST00000534825 HDGFP51858 240 aaKnown RBP26.84■■□□□ 1.89
CAPRIN1-217ENST00000534825 RIMS2Q9UQ26 1411 aa26.82■■□□□ 1.88
CAPRIN1-217ENST00000534825 SLC26A8Q96RN1 970 aa26.82■■□□□ 1.88
CAPRIN1-217ENST00000534825 SLC4A1APQ9BWU0 796 aaKnown RBP26.82■■□□□ 1.88
CAPRIN1-217ENST00000534825 UBAP1LF5GYI3 381 aa26.8■■□□□ 1.88
CAPRIN1-217ENST00000534825 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.79■■□□□ 1.88
CAPRIN1-217ENST00000534825 MYO5BQ9ULV0 1848 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms