RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 CCDC141Q6ZP82 1450 aa16.92■□□□□ 0.3
PTP4A2-216ENST00000534796 DHX29Q7Z478 1369 aaKnown RBP16.91■□□□□ 0.3
PTP4A2-216ENST00000534796 CAMSAP2Q08AD1 1489 aa16.9■□□□□ 0.3
PTP4A2-216ENST00000534796 STRCQ7RTU9 1775 aa16.89■□□□□ 0.3
PTP4A2-216ENST00000534796 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
PTP4A2-216ENST00000534796 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
PTP4A2-216ENST00000534796 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
PTP4A2-216ENST00000534796 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
PTP4A2-216ENST00000534796 LRRC9Q6ZRR7 1453 aa16.87■□□□□ 0.29
PTP4A2-216ENST00000534796 CLTCQ00610 1675 aaKnown RBP16.87■□□□□ 0.29
PTP4A2-216ENST00000534796 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
PTP4A2-216ENST00000534796 MAP3K1Q13233 1512 aa16.86■□□□□ 0.29
PTP4A2-216ENST00000534796 KIF3BO15066 747 aa16.85■□□□□ 0.29
PTP4A2-216ENST00000534796 FAM135AQ9P2D6 1515 aa16.85■□□□□ 0.29
PTP4A2-216ENST00000534796 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
PTP4A2-216ENST00000534796 CAMSAP1Q5T5Y3 1602 aa16.84■□□□□ 0.29
PTP4A2-216ENST00000534796 PLA2R1Q13018 1463 aa16.82■□□□□ 0.28
PTP4A2-216ENST00000534796 PKD2Q13563 968 aa16.82■□□□□ 0.28
PTP4A2-216ENST00000534796 MIA2Q96PC5 1412 aa16.81■□□□□ 0.28
PTP4A2-216ENST00000534796 MYO3AQ8NEV4 1616 aa16.81■□□□□ 0.28
PTP4A2-216ENST00000534796 WASHC2CQ9Y4E1 1318 aa16.8■□□□□ 0.28
PTP4A2-216ENST00000534796 ZNF142P52746 1687 aaPredicted RBP16.8■□□□□ 0.28
PTP4A2-216ENST00000534796 CEP170BQ9Y4F5 1589 aaPredicted RBP16.8■□□□□ 0.28
PTP4A2-216ENST00000534796 KDM5DQ9BY66 1539 aa16.8■□□□□ 0.28
PTP4A2-216ENST00000534796 APLP2Q06481 763 aa16.79■□□□□ 0.28
PTP4A2-216ENST00000534796 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
PTP4A2-216ENST00000534796 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
PTP4A2-216ENST00000534796 KANK4Q5T7N3 995 aaPredicted RBP16.78■□□□□ 0.28
PTP4A2-216ENST00000534796 NCKAP5LQ9HCH0 1330 aa16.77■□□□□ 0.28
PTP4A2-216ENST00000534796 A2ML1A8K2U0 1454 aa16.77■□□□□ 0.28
PTP4A2-216ENST00000534796 PZPP20742 1482 aa16.77■□□□□ 0.28
PTP4A2-216ENST00000534796 IQSEC2Q5JU85 1478 aa16.77■□□□□ 0.28
PTP4A2-216ENST00000534796 TNRQ92752 1358 aa16.77■□□□□ 0.27
PTP4A2-216ENST00000534796 TCOF1Q13428 1488 aaKnown RBP16.76■□□□□ 0.27
PTP4A2-216ENST00000534796 MAST1Q9Y2H9 1570 aa16.76■□□□□ 0.27
PTP4A2-216ENST00000534796 LTBP4Q8N2S1 1624 aa16.75■□□□□ 0.27
PTP4A2-216ENST00000534796 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
PTP4A2-216ENST00000534796 FBXO31Q5XUX0 539 aaPredicted RBP16.73■□□□□ 0.27
PTP4A2-216ENST00000534796 NLRP1Q9C000 1473 aa16.71■□□□□ 0.27
PTP4A2-216ENST00000534796 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
PTP4A2-216ENST00000534796 THEMISQ8N1K5 641 aaPredicted RBP16.7■□□□□ 0.26
PTP4A2-216ENST00000534796 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
PTP4A2-216ENST00000534796 ZNF335Q9H4Z2 1342 aaPredicted RBP16.7■□□□□ 0.26
PTP4A2-216ENST00000534796 RNF17Q9BXT8 1623 aaKnown RBP16.69■□□□□ 0.26
PTP4A2-216ENST00000534796 SLC4A1APQ9BWU0 796 aaKnown RBP16.68■□□□□ 0.26
PTP4A2-216ENST00000534796 DUOX2Q9NRD8 1548 aa16.68■□□□□ 0.26
PTP4A2-216ENST00000534796 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
PTP4A2-216ENST00000534796 ZC3H13Q5T200 1668 aaKnown RBP16.67■□□□□ 0.26
PTP4A2-216ENST00000534796 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
PTP4A2-216ENST00000534796 ABCC3O15438 1527 aa16.66■□□□□ 0.26
PTP4A2-216ENST00000534796 KIF15Q9NS87 1388 aa16.64■□□□□ 0.26
PTP4A2-216ENST00000534796 UGGT1Q9NYU2 1555 aa16.64■□□□□ 0.25
PTP4A2-216ENST00000534796 ABCC5O15440 1437 aa16.64■□□□□ 0.25
PTP4A2-216ENST00000534796 ERBINQ96RT1 1412 aa16.64■□□□□ 0.25
PTP4A2-216ENST00000534796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.251e-9■■□□□ 12.2
PTP4A2-216ENST00000534796 PTPN23Q9H3S7 1636 aa16.63■□□□□ 0.25
PTP4A2-216ENST00000534796 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
PTP4A2-216ENST00000534796 SPATA31D1Q6ZQQ2 1576 aa16.62■□□□□ 0.25
PTP4A2-216ENST00000534796 DAPK1P53355 1430 aa16.62■□□□□ 0.25
PTP4A2-216ENST00000534796 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
PTP4A2-216ENST00000534796 UBAP1LF5GYI3 381 aa16.61■□□□□ 0.25
PTP4A2-216ENST00000534796 RRP7BPQ9NSQ0 103 aa16.61■□□□□ 0.25
PTP4A2-216ENST00000534796 MROH1Q8NDA8 1641 aa16.6■□□□□ 0.25
PTP4A2-216ENST00000534796 POLR1AO95602 1720 aaPredicted RBP16.6■□□□□ 0.25
PTP4A2-216ENST00000534796 ANKRD30AQ9BXX3 1397 aa16.6■□□□□ 0.25
PTP4A2-216ENST00000534796 CPS1P31327 1500 aa16.6■□□□□ 0.25
PTP4A2-216ENST00000534796 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
PTP4A2-216ENST00000534796 KANK1Q14678 1352 aa16.59■□□□□ 0.25
PTP4A2-216ENST00000534796 NPHP4O75161 1426 aaPredicted RBP16.59■□□□□ 0.25
PTP4A2-216ENST00000534796 ARHGAP31Q2M1Z3 1444 aa16.59■□□□□ 0.25
PTP4A2-216ENST00000534796 MED14O60244 1454 aa16.59■□□□□ 0.25
PTP4A2-216ENST00000534796 PRDM15P57071 1507 aaPredicted RBP16.59■□□□□ 0.25
PTP4A2-216ENST00000534796 CROCC2H7BZ55 1655 aa16.59■□□□□ 0.25
PTP4A2-216ENST00000534796 DEPDC5O75140 1603 aa16.58■□□□□ 0.24
PTP4A2-216ENST00000534796 DISP3Q9P2K9 1392 aa16.56■□□□□ 0.24
PTP4A2-216ENST00000534796 TOM1O60784 492 aa16.54■□□□□ 0.24
PTP4A2-216ENST00000534796 CEP152O94986 1710 aa16.53■□□□□ 0.24
PTP4A2-216ENST00000534796 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
PTP4A2-216ENST00000534796 VWDEQ8N2E2 1590 aa16.51■□□□□ 0.23
PTP4A2-216ENST00000534796 IQGAP1P46940 1657 aa16.51■□□□□ 0.23
PTP4A2-216ENST00000534796 LMTK2Q8IWU2 1503 aa16.5■□□□□ 0.23
PTP4A2-216ENST00000534796 ADGRL2O95490 1459 aa16.5■□□□□ 0.23
PTP4A2-216ENST00000534796 SCAF11Q99590 1463 aaKnown RBP16.5■□□□□ 0.23
PTP4A2-216ENST00000534796 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
PTP4A2-216ENST00000534796 EID1Q9Y6B2 187 aa16.5■□□□□ 0.23
PTP4A2-216ENST00000534796 STAG3Q9UJ98 1225 aa16.49■□□□□ 0.23
PTP4A2-216ENST00000534796 TXNDC2Q86VQ3 553 aa16.48■□□□□ 0.23
PTP4A2-216ENST00000534796 SLIT1O75093 1534 aa16.48■□□□□ 0.23
PTP4A2-216ENST00000534796 ARHGAP23Q9P227 1491 aa16.48■□□□□ 0.23
PTP4A2-216ENST00000534796 UBR1Q8IWV7 1749 aa16.48■□□□□ 0.23
PTP4A2-216ENST00000534796 ANKRD50Q9ULJ7 1429 aa16.45■□□□□ 0.22
PTP4A2-216ENST00000534796 PIP4K2BP78356 416 aa16.45■□□□□ 0.22
PTP4A2-216ENST00000534796 TMEM2Q9UHN6 1383 aa16.45■□□□□ 0.22
PTP4A2-216ENST00000534796 LTKP29376 864 aa16.44■□□□□ 0.22
PTP4A2-216ENST00000534796 SLC52A1Q9NWF4 448 aa16.43■□□□□ 0.22
PTP4A2-216ENST00000534796 CFAP65Q6ZU64 1925 aaKnown RBP16.43■□□□□ 0.22
PTP4A2-216ENST00000534796 SYNMO15061 1565 aa16.43■□□□□ 0.22
PTP4A2-216ENST00000534796 EFCAB6Q5THR3 1501 aa16.42■□□□□ 0.22
PTP4A2-216ENST00000534796 IDI1Q13907 227 aa16.42■□□□□ 0.22
PTP4A2-216ENST00000534796 KDM5AP29375 1690 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms