RNA–Protein interactions for RNA: ENST00000534790.5

PDZD3-214, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,652 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-214ENST00000534790 HNRNPMP52272 730 aaKnown RBP eCLIP22.89■■□□□ 1.26
PDZD3-214ENST00000534790 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.89■■□□□ 1.25
PDZD3-214ENST00000534790 UHRF1BP1LA0JNW5 1464 aa22.89■■□□□ 1.25
PDZD3-214ENST00000534790 TTC37Q6PGP7 1564 aa22.88■■□□□ 1.25
PDZD3-214ENST00000534790 SYCP2Q9BX26 1530 aa22.88■■□□□ 1.25
PDZD3-214ENST00000534790 CCDC184Q52MB2 194 aa22.87■■□□□ 1.25
PDZD3-214ENST00000534790 CARD11Q9BXL7 1154 aa22.87■■□□□ 1.25
PDZD3-214ENST00000534790 E9PCH4 1651 aa22.87■■□□□ 1.25
PDZD3-214ENST00000534790 FAM9BQ8IZU0 186 aa22.87■■□□□ 1.25
PDZD3-214ENST00000534790 TRPM1Q7Z4N2 1603 aa22.86■■□□□ 1.25
PDZD3-214ENST00000534790 DUOX2Q9NRD8 1548 aa22.86■■□□□ 1.25
PDZD3-214ENST00000534790 PPP4R2Q9NY27 417 aa22.85■■□□□ 1.25
PDZD3-214ENST00000534790 CCDC144AA2RUR9 1427 aa22.85■■□□□ 1.25
PDZD3-214ENST00000534790 EIF2AK4Q9P2K8 1649 aaKnown RBP22.85■■□□□ 1.25
PDZD3-214ENST00000534790 ERICH6Q7L0X2 663 aa22.85■■□□□ 1.25
PDZD3-214ENST00000534790 ATP10AO60312 1499 aa22.84■■□□□ 1.25
PDZD3-214ENST00000534790 MAGI2Q86UL8 1455 aa22.84■■□□□ 1.25
PDZD3-214ENST00000534790 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
PDZD3-214ENST00000534790 SMG6Q86US8 1419 aaKnown RBP22.83■■□□□ 1.25
PDZD3-214ENST00000534790 ERBINQ96RT1 1412 aa22.83■■□□□ 1.25
PDZD3-214ENST00000534790 CLASP1Q7Z460 1538 aa22.83■■□□□ 1.25
PDZD3-214ENST00000534790 PRAG1Q86YV5 1406 aa22.81■■□□□ 1.24
PDZD3-214ENST00000534790 GPRASP1Q5JY77 1395 aa22.8■■□□□ 1.24
PDZD3-214ENST00000534790 RALBP1Q15311 655 aa22.79■■□□□ 1.24
PDZD3-214ENST00000534790 DCAF11Q8TEB1 546 aa22.78■■□□□ 1.24
PDZD3-214ENST00000534790 ARAP3Q8WWN8 1544 aa22.78■■□□□ 1.24
PDZD3-214ENST00000534790 BRD4O60885 1362 aaPredicted RBP22.77■■□□□ 1.24
PDZD3-214ENST00000534790 PLCH2O75038 1416 aa22.76■■□□□ 1.23
PDZD3-214ENST00000534790 ZCCHC11Q5TAX3 1644 aaKnown RBP22.74■■□□□ 1.23
PDZD3-214ENST00000534790 PRDM15P57071 1507 aaPredicted RBP22.73■■□□□ 1.23
PDZD3-214ENST00000534790 MYBBP1AQ9BQG0 1328 aaKnown RBP22.73■■□□□ 1.23
PDZD3-214ENST00000534790 ABCC1P33527 1531 aa22.72■■□□□ 1.23
PDZD3-214ENST00000534790 ST20-MTHFSA0A0A6YYL1 179 aa22.72■■□□□ 1.23
PDZD3-214ENST00000534790 WASHC2CQ9Y4E1 1318 aa22.72■■□□□ 1.23
PDZD3-214ENST00000534790 PLA2R1Q13018 1463 aa22.71■■□□□ 1.23
PDZD3-214ENST00000534790 NUDCQ9Y266 331 aa22.71■■□□□ 1.23
PDZD3-214ENST00000534790 LRPPRCP42704 1394 aaKnown RBP22.7■■□□□ 1.23
PDZD3-214ENST00000534790 A2MP01023 1474 aa22.7■■□□□ 1.22
PDZD3-214ENST00000534790 ERCC6L2Q5T890 1561 aa22.7■■□□□ 1.22
PDZD3-214ENST00000534790 TMC1Q8TDI8 760 aa22.7■■□□□ 1.22
PDZD3-214ENST00000534790 PNISRQ8TF01 805 aaKnown RBP22.7■■□□□ 1.22
PDZD3-214ENST00000534790 KDM2AQ9Y2K7 1162 aa22.7■■□□□ 1.22
PDZD3-214ENST00000534790 RTEL1-TNFRSF6BF6WH68 1400 aa22.69■■□□□ 1.22
PDZD3-214ENST00000534790 EFCAB2Q5VUJ9 269 aa22.69■■□□□ 1.22
PDZD3-214ENST00000534790 ZMYM4Q5VZL5 1548 aa22.69■■□□□ 1.22
PDZD3-214ENST00000534790 INSRP06213 1382 aa22.69■■□□□ 1.22
PDZD3-214ENST00000534790 POLR3GLQ9BT43 218 aa22.68■■□□□ 1.22
PDZD3-214ENST00000534790 RNF123Q5XPI4 1314 aa22.68■■□□□ 1.22
PDZD3-214ENST00000534790 STAC3Q96MF2 364 aa22.67■■□□□ 1.22
PDZD3-214ENST00000534790 COL17A1Q9UMD9 1497 aaPredicted RBP22.67■■□□□ 1.22
PDZD3-214ENST00000534790 RNF17Q9BXT8 1623 aaKnown RBP22.67■■□□□ 1.22
PDZD3-214ENST00000534790 B4GALNT3Q6L9W6 998 aa22.66■■□□□ 1.22
PDZD3-214ENST00000534790 MYT1LQ9UL68 1186 aa22.64■■□□□ 1.21
PDZD3-214ENST00000534790 PARD3Q8TEW0 1356 aa22.62■■□□□ 1.21
PDZD3-214ENST00000534790 NLRP13Q86W25 1043 aa22.6■■□□□ 1.21
PDZD3-214ENST00000534790 DEPDC5O75140 1603 aa22.6■■□□□ 1.21
PDZD3-214ENST00000534790 NEURL4Q96JN8 1562 aa22.59■■□□□ 1.21
PDZD3-214ENST00000534790 TRPM2O94759 1503 aa22.58■■□□□ 1.21
PDZD3-214ENST00000534790 CEP152O94986 1710 aa22.58■■□□□ 1.21
PDZD3-214ENST00000534790 PDE3BQ13370 1112 aa22.56■■□□□ 1.2
PDZD3-214ENST00000534790 ZFYVE16Q7Z3T8 1539 aa22.56■■□□□ 1.2
PDZD3-214ENST00000534790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.55■■□□□ 1.2
PDZD3-214ENST00000534790 SPHKAPQ2M3C7 1700 aa22.55■■□□□ 1.2
PDZD3-214ENST00000534790 WDR7Q9Y4E6 1490 aa22.55■■□□□ 1.2
PDZD3-214ENST00000534790 TET3O43151 1660 aa22.55■■□□□ 1.2
PDZD3-214ENST00000534790 TMF1P82094 1093 aa22.54■■□□□ 1.2
PDZD3-214ENST00000534790 MADDQ8WXG6 1647 aa22.53■■□□□ 1.2
PDZD3-214ENST00000534790 IQGAP1P46940 1657 aa22.53■■□□□ 1.2
PDZD3-214ENST00000534790 PTPRTO14522 1441 aa22.52■■□□□ 1.2
PDZD3-214ENST00000534790 KIAA1210Q9ULL0 1709 aa22.52■■□□□ 1.2
PDZD3-214ENST00000534790 TRAPPC8Q9Y2L5 1435 aa22.52■■□□□ 1.2
PDZD3-214ENST00000534790 ABCA9Q8IUA7 1624 aa22.51■■□□□ 1.19
PDZD3-214ENST00000534790 PRKCSHP14314 528 aaPredicted RBP22.51■■□□□ 1.19
PDZD3-214ENST00000534790 RGL3Q3MIN7 710 aa22.51■■□□□ 1.19
PDZD3-214ENST00000534790 TESK2Q96S53 571 aa22.51■■□□□ 1.19
PDZD3-214ENST00000534790 SPAG9O60271 1321 aaKnown RBP22.51■■□□□ 1.19
PDZD3-214ENST00000534790 SCAPERQ9BY12 1400 aa22.51■■□□□ 1.19
PDZD3-214ENST00000534790 PER1O15534 1290 aaPredicted RBP22.51■■□□□ 1.19
PDZD3-214ENST00000534790 INO80Q9ULG1 1556 aaPredicted RBP22.5■■□□□ 1.19
PDZD3-214ENST00000534790 VWDEQ8N2E2 1590 aa22.49■■□□□ 1.19
PDZD3-214ENST00000534790 NBPF1Q3BBV0 1214 aa22.49■■□□□ 1.19
PDZD3-214ENST00000534790 KANK1Q14678 1352 aa22.47■■□□□ 1.19
PDZD3-214ENST00000534790 CDCA8Q53HL2 280 aa22.47■■□□□ 1.19
PDZD3-214ENST00000534790 NOP58Q9Y2X3 529 aaKnown RBP22.47■■□□□ 1.19
PDZD3-214ENST00000534790 SLC24A1O60721 1099 aa22.47■■□□□ 1.19
PDZD3-214ENST00000534790 ATP7AQ04656 1500 aa22.46■■□□□ 1.19
PDZD3-214ENST00000534790 DISP3Q9P2K9 1392 aa22.45■■□□□ 1.18
PDZD3-214ENST00000534790 SYNMO15061 1565 aa22.44■■□□□ 1.18
PDZD3-214ENST00000534790 BLMP54132 1417 aaPredicted RBP22.44■■□□□ 1.18
PDZD3-214ENST00000534790 CCDC136Q96JN2 1154 aa22.43■■□□□ 1.18
PDZD3-214ENST00000534790 SCAF11Q99590 1463 aaKnown RBP22.43■■□□□ 1.18
PDZD3-214ENST00000534790 CLTCL1P53675 1640 aa22.42■■□□□ 1.18
PDZD3-214ENST00000534790 DEKP35659 375 aaKnown RBP22.41■■□□□ 1.18
PDZD3-214ENST00000534790 EIF3AQ14152 1382 aaKnown RBP22.41■■□□□ 1.18
PDZD3-214ENST00000534790 CNGB1Q14028 1251 aaPredicted RBP22.4■■□□□ 1.18
PDZD3-214ENST00000534790 FANCAO15360 1455 aa22.4■■□□□ 1.18
PDZD3-214ENST00000534790 PANK3Q9H999 370 aa22.37■■□□□ 1.17
PDZD3-214ENST00000534790 MYOM2P54296 1465 aa22.37■■□□□ 1.17
PDZD3-214ENST00000534790 ANP32AP39687 249 aaKnown RBP22.36■■□□□ 1.17
PDZD3-214ENST00000534790 NPC1L1Q9UHC9 1359 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms