RNA–Protein interactions for RNA: ENST00000534757.1

LINC00678-202, long intergenic non-protein coding RNA 678, humanhuman

TSL 3 BASIC

Gene LINC00678, Length 798 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00678-202ENST00000534757 ITSN2Q9NZM3 1697 aa13.14□□□□□ -0.31
LINC00678-202ENST00000534757 CLTCQ00610 1675 aaKnown RBP13.13□□□□□ -0.31
LINC00678-202ENST00000534757 ATP1B4Q9UN42 357 aaPredicted RBP13.13□□□□□ -0.31
LINC00678-202ENST00000534757 MYO3AQ8NEV4 1616 aa13.13□□□□□ -0.31
LINC00678-202ENST00000534757 ALKQ9UM73 1620 aa13.13□□□□□ -0.31
LINC00678-202ENST00000534757 TOM1O60784 492 aa13.12□□□□□ -0.31
LINC00678-202ENST00000534757 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
LINC00678-202ENST00000534757 CEP170BQ9Y4F5 1589 aaPredicted RBP13.11□□□□□ -0.31
LINC00678-202ENST00000534757 ABCC1P33527 1531 aa13.09□□□□□ -0.31
LINC00678-202ENST00000534757 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
LINC00678-202ENST00000534757 PTPRKQ15262 1439 aa13.09□□□□□ -0.31
LINC00678-202ENST00000534757 CDK11AQ9UQ88 783 aaPredicted RBP13.09□□□□□ -0.31
LINC00678-202ENST00000534757 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
LINC00678-202ENST00000534757 DNMT1P26358 1616 aaKnown RBP13.07□□□□□ -0.32
LINC00678-202ENST00000534757 PREX2Q70Z35 1606 aa13.07□□□□□ -0.32
LINC00678-202ENST00000534757 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
LINC00678-202ENST00000534757 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
LINC00678-202ENST00000534757 POLR1AO95602 1720 aaPredicted RBP13.07□□□□□ -0.32
LINC00678-202ENST00000534757 CDC42BPAQ5VT25 1732 aa13.07□□□□□ -0.32
LINC00678-202ENST00000534757 SHANK2Q9UPX8 1470 aa13.06□□□□□ -0.32
LINC00678-202ENST00000534757 CPS1P31327 1500 aa13.05□□□□□ -0.32
LINC00678-202ENST00000534757 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
LINC00678-202ENST00000534757 NEURL4Q96JN8 1562 aa13.05□□□□□ -0.32
LINC00678-202ENST00000534757 SAMD9LQ8IVG5 1584 aa13.04□□□□□ -0.32
LINC00678-202ENST00000534757 STRCP1A6NGW2 1772 aa13.04□□□□□ -0.32
LINC00678-202ENST00000534757 VWDEQ8N2E2 1590 aa13.03□□□□□ -0.32
LINC00678-202ENST00000534757 GGT6Q6P531 493 aa13.01□□□□□ -0.33
LINC00678-202ENST00000534757 POTEHQ6S545 545 aa13.01□□□□□ -0.33
LINC00678-202ENST00000534757 CLIP1P30622 1438 aa13.01□□□□□ -0.33
LINC00678-202ENST00000534757 FMN1Q68DA7 1419 aa13.01□□□□□ -0.33
LINC00678-202ENST00000534757 A2ML1A8K2U0 1454 aa13.01□□□□□ -0.33
LINC00678-202ENST00000534757 ARHGAP35Q9NRY4 1499 aa13□□□□□ -0.33
LINC00678-202ENST00000534757 HNRNPMP52272 730 aaKnown RBP eCLIP13□□□□□ -0.33
LINC00678-202ENST00000534757 PLXNC1O60486 1568 aa12.99□□□□□ -0.33
LINC00678-202ENST00000534757 FKBP8Q14318 412 aa12.99□□□□□ -0.33
LINC00678-202ENST00000534757 SPAG9O60271 1321 aaKnown RBP12.98□□□□□ -0.33
LINC00678-202ENST00000534757 ZNF777Q9ULD5 760 aaPredicted RBP12.98□□□□□ -0.33
LINC00678-202ENST00000534757 FBXO31Q5XUX0 539 aaPredicted RBP12.97□□□□□ -0.33
LINC00678-202ENST00000534757 POTEAQ6S8J7 498 aa12.97□□□□□ -0.33
LINC00678-202ENST00000534757 A2MP01023 1474 aa12.97□□□□□ -0.33
LINC00678-202ENST00000534757 EEA1Q15075 1411 aa12.96□□□□□ -0.33
LINC00678-202ENST00000534757 ATP7AQ04656 1500 aa12.96□□□□□ -0.33
LINC00678-202ENST00000534757 SYCP2Q9BX26 1530 aa12.95□□□□□ -0.34
LINC00678-202ENST00000534757 INO80Q9ULG1 1556 aaPredicted RBP12.94□□□□□ -0.34
LINC00678-202ENST00000534757 LRRC7Q96NW7 1537 aa12.94□□□□□ -0.34
LINC00678-202ENST00000534757 ANKLE2Q86XL3 938 aa12.94□□□□□ -0.34
LINC00678-202ENST00000534757 XIRP1Q702N8 1843 aaKnown RBP12.94□□□□□ -0.34
LINC00678-202ENST00000534757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC00678-202ENST00000534757 ADGBQ8N7X0 1667 aa12.93□□□□□ -0.34
LINC00678-202ENST00000534757 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
LINC00678-202ENST00000534757 GPATCH8Q9UKJ3 1502 aaKnown RBP12.93□□□□□ -0.34
LINC00678-202ENST00000534757 MED14O60244 1454 aa12.92□□□□□ -0.34
LINC00678-202ENST00000534757 DEPDC5O75140 1603 aa12.91□□□□□ -0.34
LINC00678-202ENST00000534757 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
LINC00678-202ENST00000534757 NPHP4O75161 1426 aaPredicted RBP12.91□□□□□ -0.34
LINC00678-202ENST00000534757 UBTFP17480 764 aaKnown RBP12.91□□□□□ -0.34
LINC00678-202ENST00000534757 IQGAP1P46940 1657 aa12.91□□□□□ -0.34
LINC00678-202ENST00000534757 TNRQ92752 1358 aa12.91□□□□□ -0.34
LINC00678-202ENST00000534757 PROM2Q8N271 834 aa12.9□□□□□ -0.34
LINC00678-202ENST00000534757 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
LINC00678-202ENST00000534757 RNF17Q9BXT8 1623 aaKnown RBP12.89□□□□□ -0.35
LINC00678-202ENST00000534757 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
LINC00678-202ENST00000534757 CFAP65Q6ZU64 1925 aaKnown RBP12.88□□□□□ -0.35
LINC00678-202ENST00000534757 ZC3H13Q5T200 1668 aaKnown RBP12.86□□□□□ -0.35
LINC00678-202ENST00000534757 PZPP20742 1482 aa12.86□□□□□ -0.35
LINC00678-202ENST00000534757 CASKIN1Q8WXD9 1431 aa12.86□□□□□ -0.35
LINC00678-202ENST00000534757 MIA2Q96PC5 1412 aa12.86□□□□□ -0.35
LINC00678-202ENST00000534757 UGGT1Q9NYU2 1555 aa12.86□□□□□ -0.35
LINC00678-202ENST00000534757 CCDC18Q5T9S5 1454 aa12.85□□□□□ -0.35
LINC00678-202ENST00000534757 SYNMO15061 1565 aa12.85□□□□□ -0.35
LINC00678-202ENST00000534757 CFDP1Q9UEE9 299 aaPredicted RBP12.84□□□□□ -0.35
LINC00678-202ENST00000534757 ZNF644Q9H582 1327 aaPredicted RBP12.84□□□□□ -0.35
LINC00678-202ENST00000534757 DHX29Q7Z478 1369 aaKnown RBP12.83□□□□□ -0.36
LINC00678-202ENST00000534757 KIF3BO15066 747 aa12.83□□□□□ -0.36
LINC00678-202ENST00000534757 PLEKHH2Q8IVE3 1493 aa12.82□□□□□ -0.36
LINC00678-202ENST00000534757 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
LINC00678-202ENST00000534757 FAM135AQ9P2D6 1515 aa12.82□□□□□ -0.36
LINC00678-202ENST00000534757 MBD5Q9P267 1494 aa12.81□□□□□ -0.36
LINC00678-202ENST00000534757 PITPNM1O00562 1244 aa12.81□□□□□ -0.36
LINC00678-202ENST00000534757 WASHC2CQ9Y4E1 1318 aa12.81□□□□□ -0.36
LINC00678-202ENST00000534757 FAM135BQ49AJ0 1406 aa12.8□□□□□ -0.36
LINC00678-202ENST00000534757 UPF1Q92900 1129 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC00678-202ENST00000534757 KDM5DQ9BY66 1539 aa12.79□□□□□ -0.36
LINC00678-202ENST00000534757 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
LINC00678-202ENST00000534757 RTEL1-TNFRSF6BF6WH68 1400 aa12.79□□□□□ -0.36
LINC00678-202ENST00000534757 UBR1Q8IWV7 1749 aa12.78□□□□□ -0.36
LINC00678-202ENST00000534757 ROBO1Q9Y6N7 1651 aa12.77□□□□□ -0.36
LINC00678-202ENST00000534757 LTKP29376 864 aa12.77□□□□□ -0.37
LINC00678-202ENST00000534757 CCNB3Q8WWL7 1395 aa12.77□□□□□ -0.37
LINC00678-202ENST00000534757 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
LINC00678-202ENST00000534757 FYCO1Q9BQS8 1478 aa12.73□□□□□ -0.37
LINC00678-202ENST00000534757 TXNDC2Q86VQ3 553 aa12.73□□□□□ -0.37
LINC00678-202ENST00000534757 NCOA2Q15596 1464 aa12.72□□□□□ -0.37
LINC00678-202ENST00000534757 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
LINC00678-202ENST00000534757 TIAM1Q13009 1591 aa12.72□□□□□ -0.37
LINC00678-202ENST00000534757 SCAF11Q99590 1463 aaKnown RBP12.72□□□□□ -0.37
LINC00678-202ENST00000534757 PHLPP1O60346 1717 aa12.71□□□□□ -0.37
LINC00678-202ENST00000534757 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.37
LINC00678-202ENST00000534757 ARHGAP23Q9P227 1491 aa12.71□□□□□ -0.38
LINC00678-202ENST00000534757 TMEM94Q12767 1356 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms