RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 KANK4Q5T7N3 995 aaPredicted RBP14.02□□□□□ -0.17
CCDC90B-219ENST00000534753 ABCA6Q8N139 1617 aa14□□□□□ -0.17
CCDC90B-219ENST00000534753 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
CCDC90B-219ENST00000534753 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
CCDC90B-219ENST00000534753 PLEKHH2Q8IVE3 1493 aa13.99□□□□□ -0.17
CCDC90B-219ENST00000534753 MLH3Q9UHC1 1453 aa13.99□□□□□ -0.17
CCDC90B-219ENST00000534753 ESF1Q9H501 851 aaKnown RBP13.98□□□□□ -0.17
CCDC90B-219ENST00000534753 KIAA1107Q9UPP5 1409 aa13.97□□□□□ -0.17
CCDC90B-219ENST00000534753 KIDINS220Q9ULH0 1771 aa13.96□□□□□ -0.17
CCDC90B-219ENST00000534753 FER1L4A9Z1Z3 1794 aa13.96□□□□□ -0.18
CCDC90B-219ENST00000534753 CEBPAP49715 358 aaPredicted RBP13.95□□□□□ -0.18
CCDC90B-219ENST00000534753 CAMSAP2Q08AD1 1489 aa13.94□□□□□ -0.18
CCDC90B-219ENST00000534753 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
CCDC90B-219ENST00000534753 MAP3K1Q13233 1512 aa13.92□□□□□ -0.18
CCDC90B-219ENST00000534753 GGT6Q6P531 493 aa13.91□□□□□ -0.18
CCDC90B-219ENST00000534753 MBD5Q9P267 1494 aa13.91□□□□□ -0.18
CCDC90B-219ENST00000534753 TSPY4P0CV99 314 aa13.9□□□□□ -0.18
CCDC90B-219ENST00000534753 TSPY10P0CW01 314 aa13.9□□□□□ -0.18
CCDC90B-219ENST00000534753 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
CCDC90B-219ENST00000534753 REREQ9P2R6 1566 aa13.89□□□□□ -0.19
CCDC90B-219ENST00000534753 INO80Q9ULG1 1556 aaPredicted RBP13.89□□□□□ -0.19
CCDC90B-219ENST00000534753 A2MP01023 1474 aa13.89□□□□□ -0.19
CCDC90B-219ENST00000534753 HSPA2P54652 639 aa13.89□□□□□ -0.19
CCDC90B-219ENST00000534753 PKD2Q13563 968 aa13.89□□□□□ -0.19
CCDC90B-219ENST00000534753 MYOM3Q5VTT5 1437 aa13.89□□□□□ -0.19
CCDC90B-219ENST00000534753 CCDC141Q6ZP82 1450 aa13.88□□□□□ -0.19
CCDC90B-219ENST00000534753 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
CCDC90B-219ENST00000534753 AGLP35573 1532 aa13.87□□□□□ -0.19
CCDC90B-219ENST00000534753 RSPH4AQ5TD94 716 aa13.87□□□□□ -0.19
CCDC90B-219ENST00000534753 PPARGC1BQ86YN6 1023 aaKnown RBP13.87□□□□□ -0.19
CCDC90B-219ENST00000534753 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
CCDC90B-219ENST00000534753 KIF3BO15066 747 aa13.85□□□□□ -0.19
CCDC90B-219ENST00000534753 ADGBQ8N7X0 1667 aa13.85□□□□□ -0.19
CCDC90B-219ENST00000534753 RTEL1-TNFRSF6BF6WH68 1400 aa13.84□□□□□ -0.19
CCDC90B-219ENST00000534753 LMTK3Q96Q04 1460 aa13.84□□□□□ -0.19
CCDC90B-219ENST00000534753 SPOCK2Q92563 424 aa13.83□□□□□ -0.2
CCDC90B-219ENST00000534753 ARHGEF5Q12774 1597 aa13.83□□□□□ -0.2
CCDC90B-219ENST00000534753 MIA2Q96PC5 1412 aa13.82□□□□□ -0.2
CCDC90B-219ENST00000534753 FAM50AQ14320 339 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-219ENST00000534753 MIER1Q8N108 512 aa13.82□□□□□ -0.2
CCDC90B-219ENST00000534753 DHX29Q7Z478 1369 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-219ENST00000534753 PLXNC1O60486 1568 aa13.81□□□□□ -0.2
CCDC90B-219ENST00000534753 C3P01024 1663 aa13.81□□□□□ -0.2
CCDC90B-219ENST00000534753 CLTCQ00610 1675 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-219ENST00000534753 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
CCDC90B-219ENST00000534753 PTPN23Q9H3S7 1636 aa13.8□□□□□ -0.2
CCDC90B-219ENST00000534753 CHIC2Q9UKJ5 165 aa13.8□□□□□ -0.2
CCDC90B-219ENST00000534753 ZMYM3Q14202 1370 aa13.79□□□□□ -0.2
CCDC90B-219ENST00000534753 FGD6Q6ZV73 1430 aa13.79□□□□□ -0.2
CCDC90B-219ENST00000534753 RRP7BPQ9NSQ0 103 aa13.78□□□□□ -0.2
CCDC90B-219ENST00000534753 UHRF1BP1Q6BDS2 1440 aa13.78□□□□□ -0.2
CCDC90B-219ENST00000534753 PREX1Q8TCU6 1659 aa13.78□□□□□ -0.2
CCDC90B-219ENST00000534753 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
CCDC90B-219ENST00000534753 ABCC5O15440 1437 aa13.75□□□□□ -0.21
CCDC90B-219ENST00000534753 DAPK1P53355 1430 aa13.74□□□□□ -0.21
CCDC90B-219ENST00000534753 MROH2AA6NES4 1674 aa13.74□□□□□ -0.21
CCDC90B-219ENST00000534753 MAST1Q9Y2H9 1570 aa13.74□□□□□ -0.21
CCDC90B-219ENST00000534753 KIF15Q9NS87 1388 aa13.72□□□□□ -0.21
CCDC90B-219ENST00000534753 ITGAEP38570 1179 aa13.72□□□□□ -0.21
CCDC90B-219ENST00000534753 FBXO31Q5XUX0 539 aaPredicted RBP13.72□□□□□ -0.21
CCDC90B-219ENST00000534753 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-219ENST00000534753 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-219ENST00000534753 CROCC2H7BZ55 1655 aa13.71□□□□□ -0.21
CCDC90B-219ENST00000534753 SETD1BQ9UPS6 1966 aaKnown RBP13.7□□□□□ -0.22
CCDC90B-219ENST00000534753 NPATQ14207 1427 aa13.7□□□□□ -0.22
CCDC90B-219ENST00000534753 PTPRKQ15262 1439 aa13.7□□□□□ -0.22
CCDC90B-219ENST00000534753 KDM5DQ9BY66 1539 aa13.69□□□□□ -0.22
CCDC90B-219ENST00000534753 DUOX2Q9NRD8 1548 aa13.69□□□□□ -0.22
CCDC90B-219ENST00000534753 ANKRD30AQ9BXX3 1397 aa13.69□□□□□ -0.22
CCDC90B-219ENST00000534753 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
CCDC90B-219ENST00000534753 ECM2O94769 699 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-219ENST00000534753 ILDR1Q86SU0 546 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-219ENST00000534753 TNRQ92752 1358 aa13.66□□□□□ -0.22
CCDC90B-219ENST00000534753 NCKAP5LQ9HCH0 1330 aa13.65□□□□□ -0.22
CCDC90B-219ENST00000534753 MYO3AQ8NEV4 1616 aa13.65□□□□□ -0.22
CCDC90B-219ENST00000534753 EIF2AK4Q9P2K8 1649 aaKnown RBP13.65□□□□□ -0.22
CCDC90B-219ENST00000534753 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
CCDC90B-219ENST00000534753 CAMSAP1Q5T5Y3 1602 aa13.64□□□□□ -0.23
CCDC90B-219ENST00000534753 RNF17Q9BXT8 1623 aaKnown RBP13.64□□□□□ -0.23
CCDC90B-219ENST00000534753 CEP152O94986 1710 aa13.64□□□□□ -0.23
CCDC90B-219ENST00000534753 ABCC3O15438 1527 aa13.64□□□□□ -0.23
CCDC90B-219ENST00000534753 ERBINQ96RT1 1412 aa13.64□□□□□ -0.23
CCDC90B-219ENST00000534753 STRCQ7RTU9 1775 aa13.63□□□□□ -0.23
CCDC90B-219ENST00000534753 PZPP20742 1482 aa13.63□□□□□ -0.23
CCDC90B-219ENST00000534753 KANK1Q14678 1352 aa13.63□□□□□ -0.23
CCDC90B-219ENST00000534753 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
CCDC90B-219ENST00000534753 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-219ENST00000534753 NCOA1Q15788 1441 aa13.63□□□□□ -0.23
CCDC90B-219ENST00000534753 CEP170BQ9Y4F5 1589 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-219ENST00000534753 PLCB2Q00722 1185 aa13.62□□□□□ -0.23
CCDC90B-219ENST00000534753 MROH1Q8NDA8 1641 aa13.61□□□□□ -0.23
CCDC90B-219ENST00000534753 FAM135AQ9P2D6 1515 aa13.61□□□□□ -0.23
CCDC90B-219ENST00000534753 CFAP65Q6ZU64 1925 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-219ENST00000534753 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-219ENST00000534753 A2ML1A8K2U0 1454 aa13.6□□□□□ -0.23
CCDC90B-219ENST00000534753 RGL2O15211 777 aa13.59□□□□□ -0.23
CCDC90B-219ENST00000534753 ZNF142P52746 1687 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-219ENST00000534753 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
CCDC90B-219ENST00000534753 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
CCDC90B-219ENST00000534753 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms