RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 CEP170BQ9Y4F5 1589 aaPredicted RBP18.46■□□□□ 0.55
CTNND1-238ENST00000534647 MYO3AQ8NEV4 1616 aa18.45■□□□□ 0.54
CTNND1-238ENST00000534647 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
CTNND1-238ENST00000534647 NCOA2Q15596 1464 aa18.44■□□□□ 0.54
CTNND1-238ENST00000534647 CCDC141Q6ZP82 1450 aa18.44■□□□□ 0.54
CTNND1-238ENST00000534647 KIF3BO15066 747 aa18.43■□□□□ 0.54
CTNND1-238ENST00000534647 A2ML1A8K2U0 1454 aa18.43■□□□□ 0.54
CTNND1-238ENST00000534647 ZNF335Q9H4Z2 1342 aaPredicted RBP18.43■□□□□ 0.54
CTNND1-238ENST00000534647 DISP3Q9P2K9 1392 aa18.41■□□□□ 0.54
CTNND1-238ENST00000534647 CAMSAP2Q08AD1 1489 aa18.4■□□□□ 0.54
CTNND1-238ENST00000534647 TSPY4P0CV99 314 aa18.39■□□□□ 0.53
CTNND1-238ENST00000534647 TSPY10P0CW01 314 aa18.39■□□□□ 0.53
CTNND1-238ENST00000534647 FOXD1Q16676 465 aa18.39■□□□□ 0.53
CTNND1-238ENST00000534647 FBXO31Q5XUX0 539 aaPredicted RBP18.38■□□□□ 0.53
CTNND1-238ENST00000534647 WASHC2CQ9Y4E1 1318 aa18.38■□□□□ 0.53
CTNND1-238ENST00000534647 TNRQ92752 1358 aa18.38■□□□□ 0.53
CTNND1-238ENST00000534647 PZPP20742 1482 aa18.38■□□□□ 0.53
CTNND1-238ENST00000534647 ARHGEF5Q12774 1597 aa18.38■□□□□ 0.53
CTNND1-238ENST00000534647 DNMT1P26358 1616 aaKnown RBP18.38■□□□□ 0.53
CTNND1-238ENST00000534647 KDM5DQ9BY66 1539 aa18.37■□□□□ 0.53
CTNND1-238ENST00000534647 ILDR2Q71H61 639 aa18.36■□□□□ 0.53
CTNND1-238ENST00000534647 MIA2Q96PC5 1412 aa18.34■□□□□ 0.53
CTNND1-238ENST00000534647 UBAP1LF5GYI3 381 aa18.34■□□□□ 0.53
CTNND1-238ENST00000534647 THEMISQ8N1K5 641 aaPredicted RBP18.34■□□□□ 0.53
CTNND1-238ENST00000534647 LRRC9Q6ZRR7 1453 aa18.33■□□□□ 0.53
CTNND1-238ENST00000534647 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.53
CTNND1-238ENST00000534647 NLRP1Q9C000 1473 aa18.33■□□□□ 0.52
CTNND1-238ENST00000534647 SOCS7O14512 581 aa18.32■□□□□ 0.52
CTNND1-238ENST00000534647 ZBTB22O15209 634 aa18.32■□□□□ 0.52
CTNND1-238ENST00000534647 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
CTNND1-238ENST00000534647 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
CTNND1-238ENST00000534647 MAST1Q9Y2H9 1570 aa18.29■□□□□ 0.52
CTNND1-238ENST00000534647 SPATA31D1Q6ZQQ2 1576 aa18.28■□□□□ 0.52
CTNND1-238ENST00000534647 NEURL4Q96JN8 1562 aa18.28■□□□□ 0.52
CTNND1-238ENST00000534647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.28■□□□□ 0.52
CTNND1-238ENST00000534647 CPS1P31327 1500 aa18.28■□□□□ 0.52
CTNND1-238ENST00000534647 MED14O60244 1454 aa18.27■□□□□ 0.52
CTNND1-238ENST00000534647 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
CTNND1-238ENST00000534647 LOC105371045A0A1W2PR82 267 aa18.26■□□□□ 0.51
CTNND1-238ENST00000534647 KANK4Q5T7N3 995 aaPredicted RBP18.26■□□□□ 0.51
CTNND1-238ENST00000534647 RNF17Q9BXT8 1623 aaKnown RBP18.26■□□□□ 0.51
CTNND1-238ENST00000534647 UGGT1Q9NYU2 1555 aa18.25■□□□□ 0.51
CTNND1-238ENST00000534647 MYOM3Q5VTT5 1437 aa18.24■□□□□ 0.51
CTNND1-238ENST00000534647 POLR1AO95602 1720 aaPredicted RBP18.24■□□□□ 0.51
CTNND1-238ENST00000534647 TOM1O60784 492 aa18.24■□□□□ 0.51
CTNND1-238ENST00000534647 NPM3O75607 178 aaKnown RBP18.24■□□□□ 0.51
CTNND1-238ENST00000534647 ABCC3O15438 1527 aa18.23■□□□□ 0.51
CTNND1-238ENST00000534647 DEPDC5O75140 1603 aa18.23■□□□□ 0.51
CTNND1-238ENST00000534647 EIF2AK4Q9P2K8 1649 aaKnown RBP18.23■□□□□ 0.51
CTNND1-238ENST00000534647 NPHP4O75161 1426 aaPredicted RBP18.23■□□□□ 0.51
CTNND1-238ENST00000534647 ZC3H13Q5T200 1668 aaKnown RBP18.21■□□□□ 0.51
CTNND1-238ENST00000534647 VWDEQ8N2E2 1590 aa18.21■□□□□ 0.51
CTNND1-238ENST00000534647 ERVK-7P63135 1459 aa18.19■□□□□ 0.5
CTNND1-238ENST00000534647 DUOX2Q9NRD8 1548 aa18.18■□□□□ 0.5
CTNND1-238ENST00000534647 MROH1Q8NDA8 1641 aa18.18■□□□□ 0.5
CTNND1-238ENST00000534647 ARHGAP31Q2M1Z3 1444 aa18.17■□□□□ 0.5
CTNND1-238ENST00000534647 HSPA1LP34931 641 aa18.16■□□□□ 0.5
CTNND1-238ENST00000534647 PIP4K2BP78356 416 aa18.14■□□□□ 0.49
CTNND1-238ENST00000534647 ABCC5O15440 1437 aa18.14■□□□□ 0.49
CTNND1-238ENST00000534647 ERBINQ96RT1 1412 aa18.14■□□□□ 0.49
CTNND1-238ENST00000534647 KIF15Q9NS87 1388 aa18.13■□□□□ 0.49
CTNND1-238ENST00000534647 IQGAP1P46940 1657 aa18.12■□□□□ 0.49
CTNND1-238ENST00000534647 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
CTNND1-238ENST00000534647 ARHGAP23Q9P227 1491 aa18.11■□□□□ 0.49
CTNND1-238ENST00000534647 PRDM15P57071 1507 aaPredicted RBP18.11■□□□□ 0.49
CTNND1-238ENST00000534647 APLP2Q06481 763 aa18.1■□□□□ 0.49
CTNND1-238ENST00000534647 RRP7BPQ9NSQ0 103 aa18.1■□□□□ 0.49
CTNND1-238ENST00000534647 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
CTNND1-238ENST00000534647 SLIT1O75093 1534 aa18.09■□□□□ 0.49
CTNND1-238ENST00000534647 LRRC7Q96NW7 1537 aa18.09■□□□□ 0.49
CTNND1-238ENST00000534647 SCAF11Q99590 1463 aaKnown RBP18.09■□□□□ 0.49
CTNND1-238ENST00000534647 LTKP29376 864 aa18.09■□□□□ 0.49
CTNND1-238ENST00000534647 TXNDC2Q86VQ3 553 aa18.08■□□□□ 0.48
CTNND1-238ENST00000534647 UBR1Q8IWV7 1749 aa18.08■□□□□ 0.48
CTNND1-238ENST00000534647 DAPK1P53355 1430 aa18.07■□□□□ 0.48
CTNND1-238ENST00000534647 CEP152O94986 1710 aa18.06■□□□□ 0.48
CTNND1-238ENST00000534647 KANK1Q14678 1352 aa18.06■□□□□ 0.48
CTNND1-238ENST00000534647 PTPN23Q9H3S7 1636 aa18.06■□□□□ 0.48
CTNND1-238ENST00000534647 EID1Q9Y6B2 187 aa18.06■□□□□ 0.48
CTNND1-238ENST00000534647 FGD6Q6ZV73 1430 aa18.06■□□□□ 0.48
CTNND1-238ENST00000534647 CROCC2H7BZ55 1655 aa18.05■□□□□ 0.48
CTNND1-238ENST00000534647 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
CTNND1-238ENST00000534647 SYNMO15061 1565 aa18.04■□□□□ 0.48
CTNND1-238ENST00000534647 STRCP1A6NGW2 1772 aa18.04■□□□□ 0.48
CTNND1-238ENST00000534647 LMTK2Q8IWU2 1503 aa18.04■□□□□ 0.48
CTNND1-238ENST00000534647 MED1Q15648 1581 aaPredicted RBP18.04■□□□□ 0.48
CTNND1-238ENST00000534647 TMEM2Q9UHN6 1383 aa18.04■□□□□ 0.48
CTNND1-238ENST00000534647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.488e-13■□□□□ 9.6
CTNND1-238ENST00000534647 IDI1Q13907 227 aa18.01■□□□□ 0.47
CTNND1-238ENST00000534647 CFAP65Q6ZU64 1925 aaKnown RBP18■□□□□ 0.47
CTNND1-238ENST00000534647 KDM5AP29375 1690 aaKnown RBP17.99■□□□□ 0.47
CTNND1-238ENST00000534647 STAG3Q9UJ98 1225 aa17.98■□□□□ 0.47
CTNND1-238ENST00000534647 CHIC2Q9UKJ5 165 aa17.98■□□□□ 0.47
CTNND1-238ENST00000534647 PIK3C2BO00750 1634 aa17.98■□□□□ 0.47
CTNND1-238ENST00000534647 NOS1P29475 1434 aa17.98■□□□□ 0.47
CTNND1-238ENST00000534647 ADGRL2O95490 1459 aa17.97■□□□□ 0.47
CTNND1-238ENST00000534647 SLC52A1Q9NWF4 448 aa17.97■□□□□ 0.47
CTNND1-238ENST00000534647 KCNA6P17658 529 aa17.96■□□□□ 0.47
CTNND1-238ENST00000534647 EFCAB6Q5THR3 1501 aa17.96■□□□□ 0.47
CTNND1-238ENST00000534647 FAM135BQ49AJ0 1406 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms