RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 CERKQ8TCT0 537 aa33.61■■■□□ 2.97
GSDMD-216ENST00000534602 WASHC2CQ9Y4E1 1318 aa33.6■■■□□ 2.97
GSDMD-216ENST00000534602 ZNF142P52746 1687 aaPredicted RBP33.6■■■□□ 2.97
GSDMD-216ENST00000534602 CAMSAP1Q5T5Y3 1602 aa33.58■■■□□ 2.97
GSDMD-216ENST00000534602 CEP170BQ9Y4F5 1589 aaPredicted RBP33.56■■■□□ 2.96
GSDMD-216ENST00000534602 PTPN23Q9H3S7 1636 aa33.56■■■□□ 2.96
GSDMD-216ENST00000534602 PZPP20742 1482 aa33.56■■■□□ 2.96
GSDMD-216ENST00000534602 RNF17Q9BXT8 1623 aaKnown RBP33.55■■■□□ 2.96
GSDMD-216ENST00000534602 EIF2AK4Q9P2K8 1649 aaKnown RBP33.54■■■□□ 2.96
GSDMD-216ENST00000534602 SHANK2Q9UPX8 1470 aa33.54■■■□□ 2.96
GSDMD-216ENST00000534602 PLA2R1Q13018 1463 aa33.53■■■□□ 2.96
GSDMD-216ENST00000534602 FGD6Q6ZV73 1430 aa33.53■■■□□ 2.96
GSDMD-216ENST00000534602 ABCC5O15440 1437 aa33.52■■■□□ 2.96
GSDMD-216ENST00000534602 TCOF1Q13428 1488 aaKnown RBP33.51■■■□□ 2.96
GSDMD-216ENST00000534602 DUOX2Q9NRD8 1548 aa33.51■■■□□ 2.95
GSDMD-216ENST00000534602 A2ML1A8K2U0 1454 aa33.5■■■□□ 2.95
GSDMD-216ENST00000534602 TNRQ92752 1358 aa33.49■■■□□ 2.95
GSDMD-216ENST00000534602 PKD2Q13563 968 aa33.48■■■□□ 2.95
GSDMD-216ENST00000534602 FBXO31Q5XUX0 539 aaPredicted RBP33.48■■■□□ 2.95
GSDMD-216ENST00000534602 CROCC2H7BZ55 1655 aa33.48■■■□□ 2.95
GSDMD-216ENST00000534602 ZC3H13Q5T200 1668 aaKnown RBP33.45■■■□□ 2.95
GSDMD-216ENST00000534602 DAPK1P53355 1430 aa33.45■■■□□ 2.95
GSDMD-216ENST00000534602 DNMT1P26358 1616 aaKnown RBP33.45■■■□□ 2.95
GSDMD-216ENST00000534602 NCKAP5LQ9HCH0 1330 aa33.44■■■□□ 2.94
GSDMD-216ENST00000534602 KIF15Q9NS87 1388 aa33.44■■■□□ 2.94
GSDMD-216ENST00000534602 ABCC3O15438 1527 aa33.43■■■□□ 2.94
GSDMD-216ENST00000534602 ERBINQ96RT1 1412 aa33.41■■■□□ 2.94
GSDMD-216ENST00000534602 MROH1Q8NDA8 1641 aa33.41■■■□□ 2.94
GSDMD-216ENST00000534602 NLRP1Q9C000 1473 aa33.38■■■□□ 2.93
GSDMD-216ENST00000534602 RRP7BPQ9NSQ0 103 aa33.38■■■□□ 2.93
GSDMD-216ENST00000534602 LTBP4Q8N2S1 1624 aa33.37■■■□□ 2.93
GSDMD-216ENST00000534602 ANKRD30AQ9BXX3 1397 aa33.34■■■□□ 2.93
GSDMD-216ENST00000534602 SPATA31D1Q6ZQQ2 1576 aa33.32■■■□□ 2.92
GSDMD-216ENST00000534602 PRDM15P57071 1507 aaPredicted RBP33.32■■■□□ 2.92
GSDMD-216ENST00000534602 THEMISQ8N1K5 641 aaPredicted RBP33.31■■■□□ 2.92
GSDMD-216ENST00000534602 IQSEC2Q5JU85 1478 aa33.3■■■□□ 2.92
GSDMD-216ENST00000534602 ERVK-7P63135 1459 aa33.28■■■□□ 2.92
GSDMD-216ENST00000534602 CHIC2Q9UKJ5 165 aa33.27■■■□□ 2.92
GSDMD-216ENST00000534602 CEP152O94986 1710 aa33.27■■■□□ 2.92
GSDMD-216ENST00000534602 ARHGAP31Q2M1Z3 1444 aa33.27■■■□□ 2.92
GSDMD-216ENST00000534602 UGGT1Q9NYU2 1555 aa33.26■■■□□ 2.92
GSDMD-216ENST00000534602 DEPDC5O75140 1603 aa33.26■■■□□ 2.91
GSDMD-216ENST00000534602 ADGRL2O95490 1459 aa33.25■■■□□ 2.91
GSDMD-216ENST00000534602 POLR1AO95602 1720 aaPredicted RBP33.23■■■□□ 2.91
GSDMD-216ENST00000534602 FAM50AQ14320 339 aaKnown RBP33.23■■■□□ 2.91
GSDMD-216ENST00000534602 ANKLE2Q86XL3 938 aa33.23■■■□□ 2.91
GSDMD-216ENST00000534602 ZNF335Q9H4Z2 1342 aaPredicted RBP33.23■■■□□ 2.91
GSDMD-216ENST00000534602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.22■■■□□ 2.91
GSDMD-216ENST00000534602 KANK1Q14678 1352 aa33.21■■■□□ 2.91
GSDMD-216ENST00000534602 NEURL4Q96JN8 1562 aa33.19■■■□□ 2.9
GSDMD-216ENST00000534602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.18■■■□□ 2.93e-6■■■□□ 14.8
GSDMD-216ENST00000534602 MED14O60244 1454 aa33.15■■■□□ 2.9
GSDMD-216ENST00000534602 LMTK2Q8IWU2 1503 aa33.15■■■□□ 2.9
GSDMD-216ENST00000534602 VWDEQ8N2E2 1590 aa33.13■■■□□ 2.89
GSDMD-216ENST00000534602 CFAP65Q6ZU64 1925 aaKnown RBP33.13■■■□□ 2.89
GSDMD-216ENST00000534602 NPHP4O75161 1426 aaPredicted RBP33.09■■■□□ 2.89
GSDMD-216ENST00000534602 ANKRD50Q9ULJ7 1429 aa33.09■■■□□ 2.89
GSDMD-216ENST00000534602 UBR1Q8IWV7 1749 aa33.07■■■□□ 2.88
GSDMD-216ENST00000534602 CPS1P31327 1500 aa33.02■■■□□ 2.88
GSDMD-216ENST00000534602 ROCK1Q13464 1354 aa33.02■■■□□ 2.88
GSDMD-216ENST00000534602 EFCAB6Q5THR3 1501 aa33.01■■■□□ 2.87
GSDMD-216ENST00000534602 IQGAP1P46940 1657 aa33.01■■■□□ 2.87
GSDMD-216ENST00000534602 ARHGAP23Q9P227 1491 aa32.99■■■□□ 2.87
GSDMD-216ENST00000534602 SLIT1O75093 1534 aa32.99■■■□□ 2.87
GSDMD-216ENST00000534602 NOS1P29475 1434 aa32.96■■■□□ 2.87
GSDMD-216ENST00000534602 SCAF11Q99590 1463 aaKnown RBP32.96■■■□□ 2.87
GSDMD-216ENST00000534602 KDM5AP29375 1690 aaKnown RBP32.95■■■□□ 2.87
GSDMD-216ENST00000534602 PIK3C2BO00750 1634 aa32.95■■■□□ 2.86
GSDMD-216ENST00000534602 RPRD2Q5VT52 1461 aaKnown RBP32.94■■■□□ 2.86
GSDMD-216ENST00000534602 UBAP1LF5GYI3 381 aa32.94■■■□□ 2.86
GSDMD-216ENST00000534602 IDI1Q13907 227 aa32.93■■■□□ 2.86
GSDMD-216ENST00000534602 TXNDC2Q86VQ3 553 aa32.92■■■□□ 2.86
GSDMD-216ENST00000534602 SYNMO15061 1565 aa32.92■■■□□ 2.86
GSDMD-216ENST00000534602 LTKP29376 864 aa32.91■■■□□ 2.86
GSDMD-216ENST00000534602 SLC52A1Q9NWF4 448 aa32.91■■■□□ 2.86
GSDMD-216ENST00000534602 STAG3Q9UJ98 1225 aa32.91■■■□□ 2.86
GSDMD-216ENST00000534602 EID1Q9Y6B2 187 aa32.91■■■□□ 2.86
GSDMD-216ENST00000534602 TMEM2Q9UHN6 1383 aa32.9■■■□□ 2.86
GSDMD-216ENST00000534602 UNC13BO14795 1591 aa32.89■■■□□ 2.86
GSDMD-216ENST00000534602 PPARGC1BQ86YN6 1023 aaKnown RBP32.89■■■□□ 2.86
GSDMD-216ENST00000534602 TET3O43151 1660 aa32.88■■■□□ 2.85
GSDMD-216ENST00000534602 GCC2Q8IWJ2 1684 aa32.82■■■□□ 2.84
GSDMD-216ENST00000534602 TOM1O60784 492 aa32.81■■■□□ 2.84
GSDMD-216ENST00000534602 ITGAEP38570 1179 aa32.81■■■□□ 2.84
GSDMD-216ENST00000534602 ADGRB3O60242 1522 aa32.81■■■□□ 2.84
GSDMD-216ENST00000534602 STRCP1A6NGW2 1772 aa32.77■■■□□ 2.84
GSDMD-216ENST00000534602 IQGAP3Q86VI3 1631 aa32.77■■■□□ 2.84
GSDMD-216ENST00000534602 RRBP1Q9P2E9 1410 aaKnown RBP32.77■■■□□ 2.84
GSDMD-216ENST00000534602 LRRC7Q96NW7 1537 aa32.75■■■□□ 2.83
GSDMD-216ENST00000534602 NUP155O75694 1391 aa32.72■■■□□ 2.83
GSDMD-216ENST00000534602 E9PCH4 1651 aa32.71■■■□□ 2.83
GSDMD-216ENST00000534602 HDGFP51858 240 aaKnown RBP32.66■■■□□ 2.82
GSDMD-216ENST00000534602 PIP4K2BP78356 416 aa32.66■■■□□ 2.82
GSDMD-216ENST00000534602 TMEM131LA2VDJ0 1609 aa32.65■■■□□ 2.82
GSDMD-216ENST00000534602 ZFYVE9O95405 1425 aa32.64■■■□□ 2.82
GSDMD-216ENST00000534602 SCAF1Q9H7N4 1312 aaKnown RBP32.64■■■□□ 2.82
GSDMD-216ENST00000534602 ALKQ9UM73 1620 aa32.63■■■□□ 2.81
GSDMD-216ENST00000534602 DISP3Q9P2K9 1392 aa32.63■■■□□ 2.81
GSDMD-216ENST00000534602 KCNA6P17658 529 aa32.61■■■□□ 2.81
GSDMD-216ENST00000534602 SLC26A8Q96RN1 970 aa32.6■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms