RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 MTUS2Q5JR59 1369 aa12.86□□□□□ -0.35
LINC00958-207ENST00000534477 CFDP1Q9UEE9 299 aaPredicted RBP12.86□□□□□ -0.35
LINC00958-207ENST00000534477 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
LINC00958-207ENST00000534477 CCNB3Q8WWL7 1395 aa12.85□□□□□ -0.35
LINC00958-207ENST00000534477 GPATCH8Q9UKJ3 1502 aaKnown RBP12.84□□□□□ -0.35
LINC00958-207ENST00000534477 REREQ9P2R6 1566 aa12.84□□□□□ -0.35
LINC00958-207ENST00000534477 AGLP35573 1532 aa12.83□□□□□ -0.36
LINC00958-207ENST00000534477 GGT6Q6P531 493 aa12.81□□□□□ -0.36
LINC00958-207ENST00000534477 ATP7AQ04656 1500 aa12.81□□□□□ -0.36
LINC00958-207ENST00000534477 STRCQ7RTU9 1775 aa12.81□□□□□ -0.36
LINC00958-207ENST00000534477 SETD1BQ9UPS6 1966 aaKnown RBP12.8□□□□□ -0.36
LINC00958-207ENST00000534477 ZNF644Q9H582 1327 aaPredicted RBP12.8□□□□□ -0.36
LINC00958-207ENST00000534477 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
LINC00958-207ENST00000534477 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
LINC00958-207ENST00000534477 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
LINC00958-207ENST00000534477 CLTCQ00610 1675 aaKnown RBP12.78□□□□□ -0.36
LINC00958-207ENST00000534477 CEP162Q5TB80 1403 aa12.78□□□□□ -0.36
LINC00958-207ENST00000534477 A2MP01023 1474 aa12.78□□□□□ -0.36
LINC00958-207ENST00000534477 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
LINC00958-207ENST00000534477 ZMYM3Q14202 1370 aa12.77□□□□□ -0.37
LINC00958-207ENST00000534477 TIAM1Q13009 1591 aa12.77□□□□□ -0.37
LINC00958-207ENST00000534477 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
LINC00958-207ENST00000534477 KIAA1107Q9UPP5 1409 aa12.76□□□□□ -0.37
LINC00958-207ENST00000534477 INO80Q9ULG1 1556 aaPredicted RBP12.76□□□□□ -0.37
LINC00958-207ENST00000534477 IFNLR1Q8IU57 520 aaPredicted RBP12.75□□□□□ -0.37
LINC00958-207ENST00000534477 CAMSAP1Q5T5Y3 1602 aa12.74□□□□□ -0.37
LINC00958-207ENST00000534477 MROH2AA6NES4 1674 aa12.73□□□□□ -0.37
LINC00958-207ENST00000534477 NCKAP5LQ9HCH0 1330 aa12.73□□□□□ -0.37
LINC00958-207ENST00000534477 ADGBQ8N7X0 1667 aa12.73□□□□□ -0.37
LINC00958-207ENST00000534477 PLXNC1O60486 1568 aa12.72□□□□□ -0.37
LINC00958-207ENST00000534477 PTPRTO14522 1441 aa12.71□□□□□ -0.37
LINC00958-207ENST00000534477 NCOA1Q15788 1441 aa12.71□□□□□ -0.37
LINC00958-207ENST00000534477 MYO3AQ8NEV4 1616 aa12.71□□□□□ -0.37
LINC00958-207ENST00000534477 NCOA2Q15596 1464 aa12.71□□□□□ -0.38
LINC00958-207ENST00000534477 NPATQ14207 1427 aa12.71□□□□□ -0.38
LINC00958-207ENST00000534477 LOC105371045A0A1W2PR82 267 aa12.7□□□□□ -0.38
LINC00958-207ENST00000534477 KIF3BO15066 747 aa12.7□□□□□ -0.38
LINC00958-207ENST00000534477 CAMSAP2Q08AD1 1489 aa12.69□□□□□ -0.38
LINC00958-207ENST00000534477 DISP3Q9P2K9 1392 aa12.69□□□□□ -0.38
LINC00958-207ENST00000534477 MBD5Q9P267 1494 aa12.68□□□□□ -0.38
LINC00958-207ENST00000534477 PTPRKQ15262 1439 aa12.68□□□□□ -0.38
LINC00958-207ENST00000534477 CEP170BQ9Y4F5 1589 aaPredicted RBP12.68□□□□□ -0.38
LINC00958-207ENST00000534477 ZNF335Q9H4Z2 1342 aaPredicted RBP12.67□□□□□ -0.38
LINC00958-207ENST00000534477 CCDC141Q6ZP82 1450 aa12.67□□□□□ -0.38
LINC00958-207ENST00000534477 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
LINC00958-207ENST00000534477 LTBP4Q8N2S1 1624 aa12.66□□□□□ -0.38
LINC00958-207ENST00000534477 ZNF142P52746 1687 aaPredicted RBP12.65□□□□□ -0.38
LINC00958-207ENST00000534477 FBXO31Q5XUX0 539 aaPredicted RBP12.65□□□□□ -0.38
LINC00958-207ENST00000534477 DHX29Q7Z478 1369 aaKnown RBP12.65□□□□□ -0.38
LINC00958-207ENST00000534477 WASHC2CQ9Y4E1 1318 aa12.64□□□□□ -0.39
LINC00958-207ENST00000534477 RTEL1-TNFRSF6BF6WH68 1400 aa12.64□□□□□ -0.39
LINC00958-207ENST00000534477 TSPY4P0CV99 314 aa12.64□□□□□ -0.39
LINC00958-207ENST00000534477 TSPY10P0CW01 314 aa12.64□□□□□ -0.39
LINC00958-207ENST00000534477 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
LINC00958-207ENST00000534477 UBAP1LF5GYI3 381 aa12.63□□□□□ -0.39
LINC00958-207ENST00000534477 PKD2Q13563 968 aa12.63□□□□□ -0.39
LINC00958-207ENST00000534477 TNRQ92752 1358 aa12.62□□□□□ -0.39
LINC00958-207ENST00000534477 KDM5DQ9BY66 1539 aa12.62□□□□□ -0.39
LINC00958-207ENST00000534477 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
LINC00958-207ENST00000534477 PLA2R1Q13018 1463 aa12.61□□□□□ -0.39
LINC00958-207ENST00000534477 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
LINC00958-207ENST00000534477 A2ML1A8K2U0 1454 aa12.6□□□□□ -0.39
LINC00958-207ENST00000534477 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
LINC00958-207ENST00000534477 DNMT1P26358 1616 aaKnown RBP12.6□□□□□ -0.39
LINC00958-207ENST00000534477 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
LINC00958-207ENST00000534477 KANK4Q5T7N3 995 aaPredicted RBP12.6□□□□□ -0.39
LINC00958-207ENST00000534477 RSPH4AQ5TD94 716 aa12.59□□□□□ -0.39
LINC00958-207ENST00000534477 MIER1Q8N108 512 aa12.59□□□□□ -0.39
LINC00958-207ENST00000534477 SPATA31D1Q6ZQQ2 1576 aa12.59□□□□□ -0.39
LINC00958-207ENST00000534477 TCOF1Q13428 1488 aaKnown RBP12.59□□□□□ -0.39
LINC00958-207ENST00000534477 ARHGEF5Q12774 1597 aa12.58□□□□□ -0.4
LINC00958-207ENST00000534477 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
LINC00958-207ENST00000534477 SPOCK2Q92563 424 aa12.58□□□□□ -0.4
LINC00958-207ENST00000534477 PZPP20742 1482 aa12.58□□□□□ -0.4
LINC00958-207ENST00000534477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC00958-207ENST00000534477 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
LINC00958-207ENST00000534477 PIP4K2BP78356 416 aa12.57□□□□□ -0.4
LINC00958-207ENST00000534477 IQSEC2Q5JU85 1478 aa12.56□□□□□ -0.4
LINC00958-207ENST00000534477 ANKLE2Q86XL3 938 aa12.55□□□□□ -0.4
LINC00958-207ENST00000534477 SPDYE1Q8NFV5 336 aaPredicted RBP12.55□□□□□ -0.4
LINC00958-207ENST00000534477 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
LINC00958-207ENST00000534477 CFAP65Q6ZU64 1925 aaKnown RBP12.54□□□□□ -0.4
LINC00958-207ENST00000534477 UGGT1Q9NYU2 1555 aa12.54□□□□□ -0.4
LINC00958-207ENST00000534477 MYOM3Q5VTT5 1437 aa12.54□□□□□ -0.4
LINC00958-207ENST00000534477 MIA2Q96PC5 1412 aa12.54□□□□□ -0.4
LINC00958-207ENST00000534477 FAM135AQ9P2D6 1515 aa12.53□□□□□ -0.4
LINC00958-207ENST00000534477 NEURL4Q96JN8 1562 aa12.53□□□□□ -0.4
LINC00958-207ENST00000534477 THEMISQ8N1K5 641 aaPredicted RBP12.53□□□□□ -0.4
LINC00958-207ENST00000534477 CEP152O94986 1710 aa12.53□□□□□ -0.4
LINC00958-207ENST00000534477 RRP7BPQ9NSQ0 103 aa12.52□□□□□ -0.41
LINC00958-207ENST00000534477 ABCC3O15438 1527 aa12.52□□□□□ -0.41
LINC00958-207ENST00000534477 MAST1Q9Y2H9 1570 aa12.52□□□□□ -0.41
LINC00958-207ENST00000534477 SLC24A1O60721 1099 aa12.51□□□□□ -0.41
LINC00958-207ENST00000534477 NPHP4O75161 1426 aaPredicted RBP12.51□□□□□ -0.41
LINC00958-207ENST00000534477 NLRP1Q9C000 1473 aa12.51□□□□□ -0.41
LINC00958-207ENST00000534477 RNF17Q9BXT8 1623 aaKnown RBP12.51□□□□□ -0.41
LINC00958-207ENST00000534477 SHANK2Q9UPX8 1470 aa12.5□□□□□ -0.41
LINC00958-207ENST00000534477 ZC3H13Q5T200 1668 aaKnown RBP12.5□□□□□ -0.41
LINC00958-207ENST00000534477 EIF2AK4Q9P2K8 1649 aaKnown RBP12.49□□□□□ -0.41
LINC00958-207ENST00000534477 KIF15Q9NS87 1388 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms