RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
FOXRED1-218ENST00000534315 ZFYVE16Q7Z3T8 1539 aa19.01■□□□□ 0.63
FOXRED1-218ENST00000534315 AFAP1Q8N556 730 aa19■□□□□ 0.63
FOXRED1-218ENST00000534315 FANCAO15360 1455 aa19■□□□□ 0.63
FOXRED1-218ENST00000534315 RTEL1-TNFRSF6BF6WH68 1400 aa18.99■□□□□ 0.63
FOXRED1-218ENST00000534315 KDM2AQ9Y2K7 1162 aa18.99■□□□□ 0.63
FOXRED1-218ENST00000534315 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
FOXRED1-218ENST00000534315 BCORL1Q5H9F3 1711 aa18.97■□□□□ 0.63
FOXRED1-218ENST00000534315 INO80Q9ULG1 1556 aaPredicted RBP18.94■□□□□ 0.62
FOXRED1-218ENST00000534315 CARD11Q9BXL7 1154 aa18.94■□□□□ 0.62
FOXRED1-218ENST00000534315 ADGRL1O94910 1474 aa18.94■□□□□ 0.62
FOXRED1-218ENST00000534315 ATP7AQ04656 1500 aa18.93■□□□□ 0.62
FOXRED1-218ENST00000534315 ATP10AO60312 1499 aa18.93■□□□□ 0.62
FOXRED1-218ENST00000534315 SCAPERQ9BY12 1400 aa18.91■□□□□ 0.62
FOXRED1-218ENST00000534315 PRAG1Q86YV5 1406 aa18.91■□□□□ 0.62
FOXRED1-218ENST00000534315 A2MP01023 1474 aa18.91■□□□□ 0.62
FOXRED1-218ENST00000534315 RGL3Q3MIN7 710 aa18.9■□□□□ 0.62
FOXRED1-218ENST00000534315 NPM1P06748 294 aaKnown RBP eCLIP18.9■□□□□ 0.62
FOXRED1-218ENST00000534315 PRKRIP1Q9H875 184 aaPredicted RBP18.89■□□□□ 0.61
FOXRED1-218ENST00000534315 DEPDC5O75140 1603 aa18.89■□□□□ 0.61
FOXRED1-218ENST00000534315 TRPM1Q7Z4N2 1603 aa18.89■□□□□ 0.61
FOXRED1-218ENST00000534315 ROCK2O75116 1388 aaKnown RBP18.88■□□□□ 0.61
FOXRED1-218ENST00000534315 E9PCH4 1651 aa18.88■□□□□ 0.61
FOXRED1-218ENST00000534315 POLR3GLQ9BT43 218 aa18.86■□□□□ 0.61
FOXRED1-218ENST00000534315 ARID4BQ4LE39 1312 aaPredicted RBP18.86■□□□□ 0.61
FOXRED1-218ENST00000534315 MYT1LQ9UL68 1186 aa18.85■□□□□ 0.61
FOXRED1-218ENST00000534315 ST20-MTHFSA0A0A6YYL1 179 aa18.84■□□□□ 0.61
FOXRED1-218ENST00000534315 CCDC184Q52MB2 194 aa18.84■□□□□ 0.61
FOXRED1-218ENST00000534315 SUPT16HQ9Y5B9 1047 aaKnown RBP18.84■□□□□ 0.61
FOXRED1-218ENST00000534315 DHX29Q7Z478 1369 aaKnown RBP18.83■□□□□ 0.61
FOXRED1-218ENST00000534315 TET3O43151 1660 aa18.82■□□□□ 0.6
FOXRED1-218ENST00000534315 EIF2AK4Q9P2K8 1649 aaKnown RBP18.82■□□□□ 0.6
FOXRED1-218ENST00000534315 VWDEQ8N2E2 1590 aa18.82■□□□□ 0.6
FOXRED1-218ENST00000534315 KIDINS220Q9ULH0 1771 aa18.82■□□□□ 0.6
FOXRED1-218ENST00000534315 TRPM2O94759 1503 aa18.81■□□□□ 0.6
FOXRED1-218ENST00000534315 SPHKAPQ2M3C7 1700 aa18.81■□□□□ 0.6
FOXRED1-218ENST00000534315 KIF3BO15066 747 aa18.81■□□□□ 0.6
FOXRED1-218ENST00000534315 NBPF1Q3BBV0 1214 aa18.81■□□□□ 0.6
FOXRED1-218ENST00000534315 CD109Q6YHK3 1445 aa18.81■□□□□ 0.6
FOXRED1-218ENST00000534315 GPRASP1Q5JY77 1395 aa18.8■□□□□ 0.6
FOXRED1-218ENST00000534315 KANK1Q14678 1352 aa18.8■□□□□ 0.6
FOXRED1-218ENST00000534315 ZNF518AQ6AHZ1 1483 aa18.8■□□□□ 0.6
FOXRED1-218ENST00000534315 MROH1Q8NDA8 1641 aa18.79■□□□□ 0.6
FOXRED1-218ENST00000534315 CFAP74Q9C0B2 1584 aa18.79■□□□□ 0.6
FOXRED1-218ENST00000534315 PRDM15P57071 1507 aaPredicted RBP18.79■□□□□ 0.6
FOXRED1-218ENST00000534315 LAMC1P11047 1609 aa18.79■□□□□ 0.6
FOXRED1-218ENST00000534315 PTPRTO14522 1441 aa18.79■□□□□ 0.6
FOXRED1-218ENST00000534315 HNRNPUQ00839 825 aaKnown RBP eCLIP18.78■□□□□ 0.65e-6■□□□□ 10.2
FOXRED1-218ENST00000534315 CEP152O94986 1710 aa18.77■□□□□ 0.6
FOXRED1-218ENST00000534315 CLTCL1P53675 1640 aa18.77■□□□□ 0.6
FOXRED1-218ENST00000534315 MRS2Q9HD23 443 aa18.77■□□□□ 0.59
FOXRED1-218ENST00000534315 POGZQ7Z3K3 1410 aa18.75■□□□□ 0.59
FOXRED1-218ENST00000534315 RNF17Q9BXT8 1623 aaKnown RBP18.73■□□□□ 0.59
FOXRED1-218ENST00000534315 MADDQ8WXG6 1647 aa18.72■□□□□ 0.59
FOXRED1-218ENST00000534315 CNGB1Q14028 1251 aaPredicted RBP18.72■□□□□ 0.59
FOXRED1-218ENST00000534315 FAM9BQ8IZU0 186 aa18.72■□□□□ 0.59
FOXRED1-218ENST00000534315 HECW2Q9P2P5 1572 aa18.7■□□□□ 0.58
FOXRED1-218ENST00000534315 EFCAB6Q5THR3 1501 aa18.7■□□□□ 0.58
FOXRED1-218ENST00000534315 MLH3Q9UHC1 1453 aa18.69■□□□□ 0.58
FOXRED1-218ENST00000534315 COL17A1Q9UMD9 1497 aaPredicted RBP18.68■□□□□ 0.58
FOXRED1-218ENST00000534315 PPRC1Q5VV67 1664 aaKnown RBP18.68■□□□□ 0.58
FOXRED1-218ENST00000534315 FRMPD1Q5SYB0 1578 aa18.68■□□□□ 0.58
FOXRED1-218ENST00000534315 TESK2Q96S53 571 aa18.67■□□□□ 0.58
FOXRED1-218ENST00000534315 UGGT1Q9NYU2 1555 aa18.67■□□□□ 0.58
FOXRED1-218ENST00000534315 NEO1Q92859 1461 aa18.66■□□□□ 0.58
FOXRED1-218ENST00000534315 FKBP8Q14318 412 aa18.66■□□□□ 0.58
FOXRED1-218ENST00000534315 LMTK2Q8IWU2 1503 aa18.66■□□□□ 0.58
FOXRED1-218ENST00000534315 DISP3Q9P2K9 1392 aa18.66■□□□□ 0.58
FOXRED1-218ENST00000534315 ABCA6Q8N139 1617 aa18.65■□□□□ 0.58
FOXRED1-218ENST00000534315 NEURL4Q96JN8 1562 aa18.64■□□□□ 0.58
FOXRED1-218ENST00000534315 STAC3Q96MF2 364 aa18.64■□□□□ 0.57
FOXRED1-218ENST00000534315 IQGAP1P46940 1657 aa18.63■□□□□ 0.57
FOXRED1-218ENST00000534315 NEFLP07196 543 aa18.62■□□□□ 0.57
FOXRED1-218ENST00000534315 KIF1BO60333 1816 aa18.62■□□□□ 0.57
FOXRED1-218ENST00000534315 RAPGEF3O95398 923 aa18.61■□□□□ 0.57
FOXRED1-218ENST00000534315 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
FOXRED1-218ENST00000534315 PELP1Q8IZL8 1130 aaKnown RBP18.61■□□□□ 0.57
FOXRED1-218ENST00000534315 MAP3K4Q9Y6R4 1608 aa18.6■□□□□ 0.57
FOXRED1-218ENST00000534315 ZBED9Q6R2W3 1325 aa18.59■□□□□ 0.57
FOXRED1-218ENST00000534315 MROH2AA6NES4 1674 aa18.59■□□□□ 0.57
FOXRED1-218ENST00000534315 TMF1P82094 1093 aa18.59■□□□□ 0.57
FOXRED1-218ENST00000534315 GGT6Q6P531 493 aa18.59■□□□□ 0.57
FOXRED1-218ENST00000534315 BCANQ96GW7 911 aa18.59■□□□□ 0.57
FOXRED1-218ENST00000534315 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
FOXRED1-218ENST00000534315 RICTORQ6R327 1708 aa18.57■□□□□ 0.56
FOXRED1-218ENST00000534315 KIAA1210Q9ULL0 1709 aa18.57■□□□□ 0.56
FOXRED1-218ENST00000534315 NPATQ14207 1427 aa18.57■□□□□ 0.56
FOXRED1-218ENST00000534315 MYOM2P54296 1465 aa18.57■□□□□ 0.56
FOXRED1-218ENST00000534315 SCAF11Q99590 1463 aaKnown RBP18.57■□□□□ 0.56
FOXRED1-218ENST00000534315 DIP2CQ9Y2E4 1556 aa18.57■□□□□ 0.56
FOXRED1-218ENST00000534315 RIMBP3CA6NJZ7 1639 aa18.57■□□□□ 0.56
FOXRED1-218ENST00000534315 RIMBP3BA6NNM3 1639 aa18.57■□□□□ 0.56
FOXRED1-218ENST00000534315 RIMBP3Q9UFD9 1639 aa18.57■□□□□ 0.56
FOXRED1-218ENST00000534315 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
FOXRED1-218ENST00000534315 RALBP1Q15311 655 aa18.57■□□□□ 0.56
FOXRED1-218ENST00000534315 CFAP65Q6ZU64 1925 aaKnown RBP18.56■□□□□ 0.56
FOXRED1-218ENST00000534315 MYBBP1AQ9BQG0 1328 aaKnown RBP18.56■□□□□ 0.56
FOXRED1-218ENST00000534315 ABCC3O15438 1527 aa18.56■□□□□ 0.56
FOXRED1-218ENST00000534315 PER1O15534 1290 aaPredicted RBP18.55■□□□□ 0.56
FOXRED1-218ENST00000534315 TMC1Q8TDI8 760 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms