RNA–Protein interactions for RNA: ENST00000533991.1

RDX-216, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-216ENST00000533991 NCOA1Q15788 1441 aa23.83■■□□□ 1.4
RDX-216ENST00000533991 MROH2AA6NES4 1674 aa23.82■■□□□ 1.4
RDX-216ENST00000533991 CROCC2H7BZ55 1655 aa23.82■■□□□ 1.4
RDX-216ENST00000533991 NPATQ14207 1427 aa23.79■■□□□ 1.4
RDX-216ENST00000533991 MROH1Q8NDA8 1641 aa23.79■■□□□ 1.4
RDX-216ENST00000533991 WASHC2CQ9Y4E1 1318 aa23.79■■□□□ 1.4
RDX-216ENST00000533991 DUOX2Q9NRD8 1548 aa23.79■■□□□ 1.4
RDX-216ENST00000533991 PREX1Q8TCU6 1659 aa23.77■■□□□ 1.4
RDX-216ENST00000533991 UHRF1BP1Q6BDS2 1440 aa23.76■■□□□ 1.39
RDX-216ENST00000533991 RNF17Q9BXT8 1623 aaKnown RBP23.76■■□□□ 1.39
RDX-216ENST00000533991 ADGRL2O95490 1459 aa23.75■■□□□ 1.39
RDX-216ENST00000533991 ANKRD30AQ9BXX3 1397 aa23.74■■□□□ 1.39
RDX-216ENST00000533991 ABCC3O15438 1527 aa23.72■■□□□ 1.39
RDX-216ENST00000533991 KDM5DQ9BY66 1539 aa23.72■■□□□ 1.39
RDX-216ENST00000533991 STRCQ7RTU9 1775 aa23.7■■□□□ 1.39
RDX-216ENST00000533991 EIF2AK4Q9P2K8 1649 aaKnown RBP23.7■■□□□ 1.39
RDX-216ENST00000533991 ERBINQ96RT1 1412 aa23.7■■□□□ 1.38
RDX-216ENST00000533991 PZPP20742 1482 aa23.69■■□□□ 1.38
RDX-216ENST00000533991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.68■■□□□ 1.383e-6■□□□□ 9.6
RDX-216ENST00000533991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.67■■□□□ 1.38
RDX-216ENST00000533991 FAM135AQ9P2D6 1515 aa23.66■■□□□ 1.38
RDX-216ENST00000533991 ITGAEP38570 1179 aa23.66■■□□□ 1.38
RDX-216ENST00000533991 RRBP1Q9P2E9 1410 aaKnown RBP23.65■■□□□ 1.38
RDX-216ENST00000533991 TNRQ92752 1358 aa23.65■■□□□ 1.38
RDX-216ENST00000533991 ANKRD50Q9ULJ7 1429 aa23.62■■□□□ 1.37
RDX-216ENST00000533991 CFAP65Q6ZU64 1925 aaKnown RBP23.62■■□□□ 1.37
RDX-216ENST00000533991 PRDM15P57071 1507 aaPredicted RBP23.62■■□□□ 1.37
RDX-216ENST00000533991 CEP152O94986 1710 aa23.62■■□□□ 1.37
RDX-216ENST00000533991 NCKAP5LQ9HCH0 1330 aa23.61■■□□□ 1.37
RDX-216ENST00000533991 DEPDC5O75140 1603 aa23.61■■□□□ 1.37
RDX-216ENST00000533991 MYO3AQ8NEV4 1616 aa23.61■■□□□ 1.37
RDX-216ENST00000533991 ROCK1Q13464 1354 aa23.61■■□□□ 1.37
RDX-216ENST00000533991 VWDEQ8N2E2 1590 aa23.61■■□□□ 1.37
RDX-216ENST00000533991 CAMSAP1Q5T5Y3 1602 aa23.59■■□□□ 1.37
RDX-216ENST00000533991 CEP170BQ9Y4F5 1589 aaPredicted RBP23.58■■□□□ 1.37
RDX-216ENST00000533991 A2ML1A8K2U0 1454 aa23.58■■□□□ 1.37
RDX-216ENST00000533991 ERVK-7P63135 1459 aa23.57■■□□□ 1.36
RDX-216ENST00000533991 ARHGAP31Q2M1Z3 1444 aa23.57■■□□□ 1.36
RDX-216ENST00000533991 SPATA31D1Q6ZQQ2 1576 aa23.56■■□□□ 1.36
RDX-216ENST00000533991 ZNF142P52746 1687 aaPredicted RBP23.55■■□□□ 1.36
RDX-216ENST00000533991 ZC3H13Q5T200 1668 aaKnown RBP23.54■■□□□ 1.36
RDX-216ENST00000533991 ILDR1Q86SU0 546 aaPredicted RBP23.54■■□□□ 1.36
RDX-216ENST00000533991 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
RDX-216ENST00000533991 PTPRTO14522 1441 aa23.52■■□□□ 1.36
RDX-216ENST00000533991 DMRT2Q9Y5R5 561 aa23.5■■□□□ 1.35
RDX-216ENST00000533991 KANK1Q14678 1352 aa23.5■■□□□ 1.35
RDX-216ENST00000533991 PLA2R1Q13018 1463 aa23.49■■□□□ 1.35
RDX-216ENST00000533991 NLRP1Q9C000 1473 aa23.49■■□□□ 1.35
RDX-216ENST00000533991 PKD2Q13563 968 aa23.47■■□□□ 1.35
RDX-216ENST00000533991 IDI1Q13907 227 aa23.47■■□□□ 1.35
RDX-216ENST00000533991 NOS1P29475 1434 aa23.45■■□□□ 1.34
RDX-216ENST00000533991 THEMISQ8N1K5 641 aaPredicted RBP23.45■■□□□ 1.34
RDX-216ENST00000533991 NAIPQ13075 1403 aa23.44■■□□□ 1.34
RDX-216ENST00000533991 CERKQ8TCT0 537 aa23.43■■□□□ 1.34
RDX-216ENST00000533991 UNC13BO14795 1591 aa23.43■■□□□ 1.34
RDX-216ENST00000533991 UGGT1Q9NYU2 1555 aa23.43■■□□□ 1.34
RDX-216ENST00000533991 EFCAB6Q5THR3 1501 aa23.42■■□□□ 1.34
RDX-216ENST00000533991 LTKP29376 864 aa23.41■■□□□ 1.34
RDX-216ENST00000533991 NUP155O75694 1391 aa23.4■■□□□ 1.34
RDX-216ENST00000533991 SYNMO15061 1565 aa23.4■■□□□ 1.34
RDX-216ENST00000533991 NEURL4Q96JN8 1562 aa23.4■■□□□ 1.34
RDX-216ENST00000533991 ANKLE2Q86XL3 938 aa23.39■■□□□ 1.33
RDX-216ENST00000533991 LTBP4Q8N2S1 1624 aa23.39■■□□□ 1.33
RDX-216ENST00000533991 ZNF335Q9H4Z2 1342 aaPredicted RBP23.38■■□□□ 1.33
RDX-216ENST00000533991 UBR1Q8IWV7 1749 aa23.36■■□□□ 1.33
RDX-216ENST00000533991 TET3O43151 1660 aa23.35■■□□□ 1.33
RDX-216ENST00000533991 FBXO41Q8TF61 875 aa23.34■■□□□ 1.33
RDX-216ENST00000533991 ARHGAP23Q9P227 1491 aa23.34■■□□□ 1.33
RDX-216ENST00000533991 PIK3C2BO00750 1634 aa23.33■■□□□ 1.33
RDX-216ENST00000533991 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.32
RDX-216ENST00000533991 MED14O60244 1454 aa23.32■■□□□ 1.32
RDX-216ENST00000533991 RPRD2Q5VT52 1461 aaKnown RBP23.32■■□□□ 1.32
RDX-216ENST00000533991 HFM1A2PYH4 1435 aa23.32■■□□□ 1.32
RDX-216ENST00000533991 E9PCH4 1651 aa23.32■■□□□ 1.32
RDX-216ENST00000533991 SLC52A1Q9NWF4 448 aa23.31■■□□□ 1.32
RDX-216ENST00000533991 TXNDC2Q86VQ3 553 aa23.3■■□□□ 1.32
RDX-216ENST00000533991 SLIT1O75093 1534 aa23.29■■□□□ 1.32
RDX-216ENST00000533991 NPHP4O75161 1426 aaPredicted RBP23.29■■□□□ 1.32
RDX-216ENST00000533991 TMEM2Q9UHN6 1383 aa23.28■■□□□ 1.32
RDX-216ENST00000533991 GCC2Q8IWJ2 1684 aa23.28■■□□□ 1.32
RDX-216ENST00000533991 POLR1AO95602 1720 aaPredicted RBP23.27■■□□□ 1.32
RDX-216ENST00000533991 SCAF11Q99590 1463 aaKnown RBP23.24■■□□□ 1.31
RDX-216ENST00000533991 STAG3Q9UJ98 1225 aa23.23■■□□□ 1.31
RDX-216ENST00000533991 TRIM52Q96A61 297 aa23.2■■□□□ 1.3
RDX-216ENST00000533991 ADGRB3O60242 1522 aa23.19■■□□□ 1.3
RDX-216ENST00000533991 MYO5BQ9ULV0 1848 aa23.19■■□□□ 1.3
RDX-216ENST00000533991 KDM5AP29375 1690 aaKnown RBP23.19■■□□□ 1.3
RDX-216ENST00000533991 TMEM131LA2VDJ0 1609 aa23.19■■□□□ 1.3
RDX-216ENST00000533991 ZFYVE9O95405 1425 aa23.18■■□□□ 1.3
RDX-216ENST00000533991 IQGAP1P46940 1657 aa23.18■■□□□ 1.3
RDX-216ENST00000533991 EID1Q9Y6B2 187 aa23.17■■□□□ 1.3
RDX-216ENST00000533991 STRCP1A6NGW2 1772 aa23.17■■□□□ 1.3
RDX-216ENST00000533991 FOXD1Q16676 465 aa23.16■■□□□ 1.3
RDX-216ENST00000533991 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
RDX-216ENST00000533991 CHGAP10645 457 aaKnown RBP23.15■■□□□ 1.3
RDX-216ENST00000533991 NUTM2DQ5VT03 806 aaPredicted RBP23.15■■□□□ 1.3
RDX-216ENST00000533991 SLC26A8Q96RN1 970 aa23.14■■□□□ 1.29
RDX-216ENST00000533991 SLC4A1APQ9BWU0 796 aaKnown RBP23.13■■□□□ 1.29
RDX-216ENST00000533991 RIMS2Q9UQ26 1411 aa23.13■■□□□ 1.29
RDX-216ENST00000533991 SETD5Q9C0A6 1442 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms