RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 HSPA2P54652 639 aa20.42■□□□□ 0.86
CMTM1-219ENST00000533953 FBXO31Q5XUX0 539 aaPredicted RBP20.41■□□□□ 0.86
CMTM1-219ENST00000533953 PPP6R1Q9UPN7 881 aa20.41■□□□□ 0.86
CMTM1-219ENST00000533953 CNTLNQ9NXG0 1405 aa20.41■□□□□ 0.86
CMTM1-219ENST00000533953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.4■□□□□ 0.86
CMTM1-219ENST00000533953 ADGRL2O95490 1459 aa20.39■□□□□ 0.85
CMTM1-219ENST00000533953 CLTCQ00610 1675 aaKnown RBP20.38■□□□□ 0.85
CMTM1-219ENST00000533953 ERBINQ96RT1 1412 aa20.36■□□□□ 0.85
CMTM1-219ENST00000533953 C3P01024 1663 aa20.36■□□□□ 0.85
CMTM1-219ENST00000533953 LMTK3Q96Q04 1460 aa20.35■□□□□ 0.85
CMTM1-219ENST00000533953 ANKRD50Q9ULJ7 1429 aa20.35■□□□□ 0.85
CMTM1-219ENST00000533953 MROH1Q8NDA8 1641 aa20.33■□□□□ 0.84
CMTM1-219ENST00000533953 ROCK1Q13464 1354 aa20.33■□□□□ 0.84
CMTM1-219ENST00000533953 KDM5DQ9BY66 1539 aa20.32■□□□□ 0.84
CMTM1-219ENST00000533953 RNF17Q9BXT8 1623 aaKnown RBP20.31■□□□□ 0.84
CMTM1-219ENST00000533953 EIF2AK4Q9P2K8 1649 aaKnown RBP20.31■□□□□ 0.84
CMTM1-219ENST00000533953 ABCC3O15438 1527 aa20.3■□□□□ 0.84
CMTM1-219ENST00000533953 MROH2AA6NES4 1674 aa20.28■□□□□ 0.84
CMTM1-219ENST00000533953 NPATQ14207 1427 aa20.27■□□□□ 0.83
CMTM1-219ENST00000533953 UHRF1BP1Q6BDS2 1440 aa20.27■□□□□ 0.83
CMTM1-219ENST00000533953 KANK1Q14678 1352 aa20.26■□□□□ 0.83
CMTM1-219ENST00000533953 PZPP20742 1482 aa20.24■□□□□ 0.83
CMTM1-219ENST00000533953 TNRQ92752 1358 aa20.23■□□□□ 0.83
CMTM1-219ENST00000533953 PRDM15P57071 1507 aaPredicted RBP20.23■□□□□ 0.83
CMTM1-219ENST00000533953 CEP152O94986 1710 aa20.22■□□□□ 0.83
CMTM1-219ENST00000533953 NAIPQ13075 1403 aa20.21■□□□□ 0.83
CMTM1-219ENST00000533953 DEPDC5O75140 1603 aa20.2■□□□□ 0.82
CMTM1-219ENST00000533953 PREX1Q8TCU6 1659 aa20.2■□□□□ 0.82
CMTM1-219ENST00000533953 FAM135AQ9P2D6 1515 aa20.2■□□□□ 0.82
CMTM1-219ENST00000533953 NUP155O75694 1391 aa20.2■□□□□ 0.82
CMTM1-219ENST00000533953 SETD1BQ9UPS6 1966 aaKnown RBP20.19■□□□□ 0.82
CMTM1-219ENST00000533953 VWDEQ8N2E2 1590 aa20.18■□□□□ 0.82
CMTM1-219ENST00000533953 ERVK-7P63135 1459 aa20.17■□□□□ 0.82
CMTM1-219ENST00000533953 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
CMTM1-219ENST00000533953 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
CMTM1-219ENST00000533953 ARHGAP31Q2M1Z3 1444 aa20.15■□□□□ 0.82
CMTM1-219ENST00000533953 ZC3H13Q5T200 1668 aaKnown RBP20.15■□□□□ 0.82
CMTM1-219ENST00000533953 LMTK2Q8IWU2 1503 aa20.14■□□□□ 0.81
CMTM1-219ENST00000533953 HFM1A2PYH4 1435 aa20.14■□□□□ 0.81
CMTM1-219ENST00000533953 TRIM52Q96A61 297 aa20.14■□□□□ 0.81
CMTM1-219ENST00000533953 CFAP65Q6ZU64 1925 aaKnown RBP20.14■□□□□ 0.81
CMTM1-219ENST00000533953 MYO3AQ8NEV4 1616 aa20.13■□□□□ 0.81
CMTM1-219ENST00000533953 A2ML1A8K2U0 1454 aa20.12■□□□□ 0.81
CMTM1-219ENST00000533953 UNC13BO14795 1591 aa20.12■□□□□ 0.81
CMTM1-219ENST00000533953 SPATA31D1Q6ZQQ2 1576 aa20.11■□□□□ 0.81
CMTM1-219ENST00000533953 CEP170BQ9Y4F5 1589 aaPredicted RBP20.11■□□□□ 0.81
CMTM1-219ENST00000533953 IDI1Q13907 227 aa20.1■□□□□ 0.81
CMTM1-219ENST00000533953 EFCAB6Q5THR3 1501 aa20.08■□□□□ 0.81
CMTM1-219ENST00000533953 NLRP1Q9C000 1473 aa20.07■□□□□ 0.8
CMTM1-219ENST00000533953 THEMISQ8N1K5 641 aaPredicted RBP20.07■□□□□ 0.8
CMTM1-219ENST00000533953 NOS1P29475 1434 aa20.06■□□□□ 0.8
CMTM1-219ENST00000533953 GCC2Q8IWJ2 1684 aa20.04■□□□□ 0.8
CMTM1-219ENST00000533953 STRCQ7RTU9 1775 aa20.04■□□□□ 0.8
CMTM1-219ENST00000533953 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
CMTM1-219ENST00000533953 UGGT1Q9NYU2 1555 aa20.04■□□□□ 0.8
CMTM1-219ENST00000533953 IQGAP3Q86VI3 1631 aa20.03■□□□□ 0.8
CMTM1-219ENST00000533953 SYNMO15061 1565 aa20.03■□□□□ 0.8
CMTM1-219ENST00000533953 TET3O43151 1660 aa20.03■□□□□ 0.8
CMTM1-219ENST00000533953 ZNF142P52746 1687 aaPredicted RBP20.03■□□□□ 0.8
CMTM1-219ENST00000533953 PKD2Q13563 968 aa20.02■□□□□ 0.8
CMTM1-219ENST00000533953 FOXD1Q16676 465 aa20.02■□□□□ 0.8
CMTM1-219ENST00000533953 SLC4A1APQ9BWU0 796 aaKnown RBP20.02■□□□□ 0.8
CMTM1-219ENST00000533953 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.79
CMTM1-219ENST00000533953 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
CMTM1-219ENST00000533953 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
CMTM1-219ENST00000533953 ANKLE2Q86XL3 938 aa20■□□□□ 0.79
CMTM1-219ENST00000533953 E9PCH4 1651 aa20■□□□□ 0.79
CMTM1-219ENST00000533953 RPRD2Q5VT52 1461 aaKnown RBP19.99■□□□□ 0.79
CMTM1-219ENST00000533953 LTKP29376 864 aa19.99■□□□□ 0.79
CMTM1-219ENST00000533953 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
CMTM1-219ENST00000533953 SLC52A1Q9NWF4 448 aa19.99■□□□□ 0.79
CMTM1-219ENST00000533953 PLA2R1Q13018 1463 aa19.98■□□□□ 0.79
CMTM1-219ENST00000533953 RAB3GAP2Q9H2M9 1393 aa19.97■□□□□ 0.79
CMTM1-219ENST00000533953 PIK3C2BO00750 1634 aa19.96■□□□□ 0.79
CMTM1-219ENST00000533953 TXNDC2Q86VQ3 553 aa19.96■□□□□ 0.79
CMTM1-219ENST00000533953 MPHOSPH9Q99550 1183 aa19.96■□□□□ 0.79
CMTM1-219ENST00000533953 PTPRTO14522 1441 aa19.95■□□□□ 0.78
CMTM1-219ENST00000533953 NUTM2DQ5VT03 806 aaPredicted RBP19.93■□□□□ 0.78
CMTM1-219ENST00000533953 UBR1Q8IWV7 1749 aa19.93■□□□□ 0.78
CMTM1-219ENST00000533953 TMEM2Q9UHN6 1383 aa19.92■□□□□ 0.78
CMTM1-219ENST00000533953 ZNF335Q9H4Z2 1342 aaPredicted RBP19.91■□□□□ 0.78
CMTM1-219ENST00000533953 EID1Q9Y6B2 187 aa19.9■□□□□ 0.78
CMTM1-219ENST00000533953 NPHP4O75161 1426 aaPredicted RBP19.89■□□□□ 0.77
CMTM1-219ENST00000533953 NEURL4Q96JN8 1562 aa19.89■□□□□ 0.77
CMTM1-219ENST00000533953 ARHGAP23Q9P227 1491 aa19.88■□□□□ 0.77
CMTM1-219ENST00000533953 ADGRB3O60242 1522 aa19.86■□□□□ 0.77
CMTM1-219ENST00000533953 SCAF11Q99590 1463 aaKnown RBP19.86■□□□□ 0.77
CMTM1-219ENST00000533953 SLIT1O75093 1534 aa19.86■□□□□ 0.77
CMTM1-219ENST00000533953 CERKQ8TCT0 537 aa19.85■□□□□ 0.77
CMTM1-219ENST00000533953 ZNF326Q5BKZ1 582 aaKnown RBP19.84■□□□□ 0.77
CMTM1-219ENST00000533953 BCANQ96GW7 911 aa19.84■□□□□ 0.77
CMTM1-219ENST00000533953 SLC26A8Q96RN1 970 aa19.84■□□□□ 0.77
CMTM1-219ENST00000533953 MED14O60244 1454 aa19.84■□□□□ 0.77
CMTM1-219ENST00000533953 RIMS2Q9UQ26 1411 aa19.84■□□□□ 0.77
CMTM1-219ENST00000533953 TMEM131LA2VDJ0 1609 aa19.84■□□□□ 0.77
CMTM1-219ENST00000533953 PPP1R15AO75807 674 aaPredicted RBP19.82■□□□□ 0.76
CMTM1-219ENST00000533953 CLTCL1P53675 1640 aa19.81■□□□□ 0.76
CMTM1-219ENST00000533953 ZFYVE9O95405 1425 aa19.81■□□□□ 0.76
CMTM1-219ENST00000533953 POLR1AO95602 1720 aaPredicted RBP19.81■□□□□ 0.76
CMTM1-219ENST00000533953 SPHKAPQ2M3C7 1700 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms