RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ITGAEP38570 1179 aa20.43■□□□□ 0.86
CAPN1-227ENST00000533909 EIF2AK4Q9P2K8 1649 aaKnown RBP20.42■□□□□ 0.86
CAPN1-227ENST00000533909 ERBINQ96RT1 1412 aa20.41■□□□□ 0.86
CAPN1-227ENST00000533909 LMTK3Q96Q04 1460 aa20.4■□□□□ 0.86
CAPN1-227ENST00000533909 KDM5DQ9BY66 1539 aa20.4■□□□□ 0.86
CAPN1-227ENST00000533909 FAM135AQ9P2D6 1515 aa20.39■□□□□ 0.85
CAPN1-227ENST00000533909 NCOA1Q15788 1441 aa20.39■□□□□ 0.85
CAPN1-227ENST00000533909 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.85
CAPN1-227ENST00000533909 PREX1Q8TCU6 1659 aa20.38■□□□□ 0.85
CAPN1-227ENST00000533909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.37■□□□□ 0.85
CAPN1-227ENST00000533909 RNF17Q9BXT8 1623 aaKnown RBP20.37■□□□□ 0.85
CAPN1-227ENST00000533909 SETD1BQ9UPS6 1966 aaKnown RBP20.37■□□□□ 0.85
CAPN1-227ENST00000533909 ADGRL2O95490 1459 aa20.37■□□□□ 0.85
CAPN1-227ENST00000533909 NPATQ14207 1427 aa20.36■□□□□ 0.85
CAPN1-227ENST00000533909 HSPA2P54652 639 aa20.36■□□□□ 0.85
CAPN1-227ENST00000533909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.36■□□□□ 0.85
CAPN1-227ENST00000533909 KANK1Q14678 1352 aa20.35■□□□□ 0.85
CAPN1-227ENST00000533909 PTPRKQ15262 1439 aa20.32■□□□□ 0.84
CAPN1-227ENST00000533909 RRBP1Q9P2E9 1410 aaKnown RBP20.32■□□□□ 0.84
CAPN1-227ENST00000533909 ANKRD50Q9ULJ7 1429 aa20.31■□□□□ 0.84
CAPN1-227ENST00000533909 ZC3H13Q5T200 1668 aaKnown RBP20.31■□□□□ 0.84
CAPN1-227ENST00000533909 ABCC3O15438 1527 aa20.31■□□□□ 0.84
CAPN1-227ENST00000533909 ROCK1Q13464 1354 aa20.31■□□□□ 0.84
CAPN1-227ENST00000533909 PZPP20742 1482 aa20.3■□□□□ 0.84
CAPN1-227ENST00000533909 PRDM15P57071 1507 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-227ENST00000533909 MROH1Q8NDA8 1641 aa20.28■□□□□ 0.84
CAPN1-227ENST00000533909 FBXO31Q5XUX0 539 aaPredicted RBP20.27■□□□□ 0.84
CAPN1-227ENST00000533909 TNRQ92752 1358 aa20.26■□□□□ 0.83
CAPN1-227ENST00000533909 CEP152O94986 1710 aa20.25■□□□□ 0.83
CAPN1-227ENST00000533909 DEPDC5O75140 1603 aa20.25■□□□□ 0.83
CAPN1-227ENST00000533909 CAMSAP1Q5T5Y3 1602 aa20.24■□□□□ 0.83
CAPN1-227ENST00000533909 MYO3AQ8NEV4 1616 aa20.24■□□□□ 0.83
CAPN1-227ENST00000533909 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-227ENST00000533909 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
CAPN1-227ENST00000533909 A2ML1A8K2U0 1454 aa20.18■□□□□ 0.82
CAPN1-227ENST00000533909 ZNF142P52746 1687 aaPredicted RBP20.18■□□□□ 0.82
CAPN1-227ENST00000533909 ARHGAP31Q2M1Z3 1444 aa20.18■□□□□ 0.82
CAPN1-227ENST00000533909 ERVK-7P63135 1459 aa20.18■□□□□ 0.82
CAPN1-227ENST00000533909 NLRP1Q9C000 1473 aa20.17■□□□□ 0.82
CAPN1-227ENST00000533909 LMTK2Q8IWU2 1503 aa20.17■□□□□ 0.82
CAPN1-227ENST00000533909 SPATA31D1Q6ZQQ2 1576 aa20.15■□□□□ 0.82
CAPN1-227ENST00000533909 VWDEQ8N2E2 1590 aa20.15■□□□□ 0.82
CAPN1-227ENST00000533909 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
CAPN1-227ENST00000533909 UNC13BO14795 1591 aa20.14■□□□□ 0.81
CAPN1-227ENST00000533909 NUP155O75694 1391 aa20.13■□□□□ 0.81
CAPN1-227ENST00000533909 THEMISQ8N1K5 641 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-227ENST00000533909 EFCAB6Q5THR3 1501 aa20.12■□□□□ 0.81
CAPN1-227ENST00000533909 UGGT1Q9NYU2 1555 aa20.1■□□□□ 0.81
CAPN1-227ENST00000533909 PKD2Q13563 968 aa20.1■□□□□ 0.81
CAPN1-227ENST00000533909 STAG3Q9UJ98 1225 aa20.1■□□□□ 0.81
CAPN1-227ENST00000533909 NAIPQ13075 1403 aa20.1■□□□□ 0.81
CAPN1-227ENST00000533909 NCKAP5LQ9HCH0 1330 aa20.09■□□□□ 0.81
CAPN1-227ENST00000533909 STRCQ7RTU9 1775 aa20.09■□□□□ 0.81
CAPN1-227ENST00000533909 PLA2R1Q13018 1463 aa20.09■□□□□ 0.81
CAPN1-227ENST00000533909 TET3O43151 1660 aa20.09■□□□□ 0.81
CAPN1-227ENST00000533909 GCC2Q8IWJ2 1684 aa20.08■□□□□ 0.81
CAPN1-227ENST00000533909 HFM1A2PYH4 1435 aa20.08■□□□□ 0.8
CAPN1-227ENST00000533909 RPRD2Q5VT52 1461 aaKnown RBP20.07■□□□□ 0.8
CAPN1-227ENST00000533909 IQGAP3Q86VI3 1631 aa20.06■□□□□ 0.8
CAPN1-227ENST00000533909 TRIM52Q96A61 297 aa20.06■□□□□ 0.8
CAPN1-227ENST00000533909 PTPRTO14522 1441 aa20.05■□□□□ 0.8
CAPN1-227ENST00000533909 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
CAPN1-227ENST00000533909 SLC52A1Q9NWF4 448 aa20.02■□□□□ 0.8
CAPN1-227ENST00000533909 NOS1P29475 1434 aa20.02■□□□□ 0.79
CAPN1-227ENST00000533909 IDI1Q13907 227 aa20■□□□□ 0.79
CAPN1-227ENST00000533909 SYNMO15061 1565 aa20■□□□□ 0.79
CAPN1-227ENST00000533909 EID1Q9Y6B2 187 aa19.99■□□□□ 0.79
CAPN1-227ENST00000533909 UBR1Q8IWV7 1749 aa19.99■□□□□ 0.79
CAPN1-227ENST00000533909 PIK3C2BO00750 1634 aa19.98■□□□□ 0.79
CAPN1-227ENST00000533909 E9PCH4 1651 aa19.98■□□□□ 0.79
CAPN1-227ENST00000533909 POLR1AO95602 1720 aaPredicted RBP19.98■□□□□ 0.79
CAPN1-227ENST00000533909 CHGAP10645 457 aaKnown RBP19.96■□□□□ 0.79
CAPN1-227ENST00000533909 SLC4A1APQ9BWU0 796 aaKnown RBP19.95■□□□□ 0.78
CAPN1-227ENST00000533909 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
CAPN1-227ENST00000533909 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
CAPN1-227ENST00000533909 ADGRB3O60242 1522 aa19.93■□□□□ 0.78
CAPN1-227ENST00000533909 ACIN1Q9UKV3 1341 aaKnown RBP19.93■□□□□ 0.78
CAPN1-227ENST00000533909 TMEM2Q9UHN6 1383 aa19.93■□□□□ 0.78
CAPN1-227ENST00000533909 SETD5Q9C0A6 1442 aa19.92■□□□□ 0.78
CAPN1-227ENST00000533909 SCAF11Q99590 1463 aaKnown RBP19.92■□□□□ 0.78
CAPN1-227ENST00000533909 KDM5AP29375 1690 aaKnown RBP19.91■□□□□ 0.78
CAPN1-227ENST00000533909 CERKQ8TCT0 537 aa19.91■□□□□ 0.78
CAPN1-227ENST00000533909 SLIT1O75093 1534 aa19.91■□□□□ 0.78
CAPN1-227ENST00000533909 NEURL4Q96JN8 1562 aa19.91■□□□□ 0.78
CAPN1-227ENST00000533909 MED14O60244 1454 aa19.89■□□□□ 0.77
CAPN1-227ENST00000533909 PPP1R15AO75807 674 aaPredicted RBP19.89■□□□□ 0.77
CAPN1-227ENST00000533909 HDGFP51858 240 aaKnown RBP19.89■□□□□ 0.77
CAPN1-227ENST00000533909 BCANQ96GW7 911 aa19.89■□□□□ 0.77
CAPN1-227ENST00000533909 ARHGAP23Q9P227 1491 aa19.89■□□□□ 0.77
CAPN1-227ENST00000533909 ZNF335Q9H4Z2 1342 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-227ENST00000533909 LTKP29376 864 aa19.88■□□□□ 0.77
CAPN1-227ENST00000533909 SPHKAPQ2M3C7 1700 aa19.88■□□□□ 0.77
CAPN1-227ENST00000533909 IQGAP1P46940 1657 aa19.87■□□□□ 0.77
CAPN1-227ENST00000533909 TMEM131LA2VDJ0 1609 aa19.84■□□□□ 0.77
CAPN1-227ENST00000533909 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.77
CAPN1-227ENST00000533909 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.77
CAPN1-227ENST00000533909 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.83■□□□□ 0.77
CAPN1-227ENST00000533909 FBXO41Q8TF61 875 aa19.83■□□□□ 0.77
CAPN1-227ENST00000533909 RIMS2Q9UQ26 1411 aa19.83■□□□□ 0.76
CAPN1-227ENST00000533909 TRPM2O94759 1503 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms