RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 FAM163AQ96GL9 167 aaPredicted RBP16.56■□□□□ 0.24
CCDC90B-218ENST00000533761 CDC42BPBQ9Y5S2 1711 aa16.56■□□□□ 0.24
CCDC90B-218ENST00000533761 ATMINO43313 823 aaPredicted RBP16.55■□□□□ 0.24
CCDC90B-218ENST00000533761 ZNF777Q9ULD5 760 aaPredicted RBP16.55■□□□□ 0.24
CCDC90B-218ENST00000533761 CFAP74Q9C0B2 1584 aa16.55■□□□□ 0.24
CCDC90B-218ENST00000533761 MIA2Q96PC5 1412 aa16.54■□□□□ 0.24
CCDC90B-218ENST00000533761 RRBP1Q9P2E9 1410 aaKnown RBP16.54■□□□□ 0.24
CCDC90B-218ENST00000533761 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
CCDC90B-218ENST00000533761 MS4A3Q96HJ5 214 aa16.51■□□□□ 0.23
CCDC90B-218ENST00000533761 SCUBE2Q9NQ36 999 aa16.5■□□□□ 0.23
CCDC90B-218ENST00000533761 ADGRL1O94910 1474 aa16.49■□□□□ 0.23
CCDC90B-218ENST00000533761 PLEKHH2Q8IVE3 1493 aa16.49■□□□□ 0.23
CCDC90B-218ENST00000533761 FGD6Q6ZV73 1430 aa16.49■□□□□ 0.23
CCDC90B-218ENST00000533761 ZNF644Q9H582 1327 aaPredicted RBP16.48■□□□□ 0.23
CCDC90B-218ENST00000533761 SCAPERQ9BY12 1400 aa16.48■□□□□ 0.23
CCDC90B-218ENST00000533761 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.48■□□□□ 0.23
CCDC90B-218ENST00000533761 KIAA1107Q9UPP5 1409 aa16.47■□□□□ 0.23
CCDC90B-218ENST00000533761 SAMD9LQ8IVG5 1584 aa16.47■□□□□ 0.23
CCDC90B-218ENST00000533761 RSPH4AQ5TD94 716 aa16.46■□□□□ 0.23
CCDC90B-218ENST00000533761 DENND4BO75064 1496 aaPredicted RBP16.45■□□□□ 0.22
CCDC90B-218ENST00000533761 CAMSAP2Q08AD1 1489 aa16.45■□□□□ 0.22
CCDC90B-218ENST00000533761 HNRNPMP52272 730 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCDC90B-218ENST00000533761 ABCC1P33527 1531 aa16.45■□□□□ 0.22
CCDC90B-218ENST00000533761 FAM50AQ14320 339 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-218ENST00000533761 KDM6BO15054 1643 aa16.44■□□□□ 0.22
CCDC90B-218ENST00000533761 PTPN23Q9H3S7 1636 aa16.44■□□□□ 0.22
CCDC90B-218ENST00000533761 RAPGEF3O95398 923 aa16.43■□□□□ 0.22
CCDC90B-218ENST00000533761 MNX1P50219 401 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-218ENST00000533761 TCOF1Q13428 1488 aaKnown RBP16.42■□□□□ 0.22
CCDC90B-218ENST00000533761 COL17A1Q9UMD9 1497 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-218ENST00000533761 SYCP2Q9BX26 1530 aa16.42■□□□□ 0.22
CCDC90B-218ENST00000533761 ZNF518AQ6AHZ1 1483 aa16.42■□□□□ 0.22
CCDC90B-218ENST00000533761 ARHGEF12Q9NZN5 1544 aa16.41■□□□□ 0.22
CCDC90B-218ENST00000533761 AFAP1Q8N556 730 aa16.41■□□□□ 0.22
CCDC90B-218ENST00000533761 POGZQ7Z3K3 1410 aa16.41■□□□□ 0.22
CCDC90B-218ENST00000533761 MBD5Q9P267 1494 aa16.4■□□□□ 0.22
CCDC90B-218ENST00000533761 TRAPPC8Q9Y2L5 1435 aa16.39■□□□□ 0.21
CCDC90B-218ENST00000533761 TSPY4P0CV99 314 aa16.38■□□□□ 0.21
CCDC90B-218ENST00000533761 TSPY10P0CW01 314 aa16.38■□□□□ 0.21
CCDC90B-218ENST00000533761 RICTORQ6R327 1708 aa16.37■□□□□ 0.21
CCDC90B-218ENST00000533761 ARHGEF5Q12774 1597 aa16.37■□□□□ 0.21
CCDC90B-218ENST00000533761 CCDC141Q6ZP82 1450 aa16.37■□□□□ 0.21
CCDC90B-218ENST00000533761 MYT1LQ9UL68 1186 aa16.36■□□□□ 0.21
CCDC90B-218ENST00000533761 SPAG9O60271 1321 aaKnown RBP16.35■□□□□ 0.21
CCDC90B-218ENST00000533761 KDM5CP41229 1560 aa16.34■□□□□ 0.21
CCDC90B-218ENST00000533761 MAGI2Q86UL8 1455 aa16.34■□□□□ 0.21
CCDC90B-218ENST00000533761 FRMPD1Q5SYB0 1578 aa16.34■□□□□ 0.21
CCDC90B-218ENST00000533761 ATN1P54259 1190 aaPredicted RBP16.34■□□□□ 0.21
CCDC90B-218ENST00000533761 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-218ENST00000533761 ABCC5O15440 1437 aa16.33■□□□□ 0.2
CCDC90B-218ENST00000533761 DAPK1P53355 1430 aa16.33■□□□□ 0.2
CCDC90B-218ENST00000533761 MLH3Q9UHC1 1453 aa16.33■□□□□ 0.2
CCDC90B-218ENST00000533761 ZMYM4Q5VZL5 1548 aa16.32■□□□□ 0.2
CCDC90B-218ENST00000533761 ITGAEP38570 1179 aa16.31■□□□□ 0.2
CCDC90B-218ENST00000533761 RTEL1-TNFRSF6BF6WH68 1400 aa16.31■□□□□ 0.2
CCDC90B-218ENST00000533761 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
CCDC90B-218ENST00000533761 CDAN1Q8IWY9 1227 aa16.3■□□□□ 0.2
CCDC90B-218ENST00000533761 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
CCDC90B-218ENST00000533761 C9orf84Q5VXU9 1444 aa16.29■□□□□ 0.2
CCDC90B-218ENST00000533761 ATP7AQ04656 1500 aa16.28■□□□□ 0.2
CCDC90B-218ENST00000533761 CHIC2Q9UKJ5 165 aa16.27■□□□□ 0.2
CCDC90B-218ENST00000533761 ZFYVE16Q7Z3T8 1539 aa16.27■□□□□ 0.2
CCDC90B-218ENST00000533761 CROCC2H7BZ55 1655 aa16.27■□□□□ 0.19
CCDC90B-218ENST00000533761 INO80Q9ULG1 1556 aaPredicted RBP16.27■□□□□ 0.19
CCDC90B-218ENST00000533761 MAST1Q9Y2H9 1570 aa16.27■□□□□ 0.19
CCDC90B-218ENST00000533761 KIDINS220Q9ULH0 1771 aa16.26■□□□□ 0.19
CCDC90B-218ENST00000533761 YEATS2Q9ULM3 1422 aa16.25■□□□□ 0.19
CCDC90B-218ENST00000533761 ANKRD30AQ9BXX3 1397 aa16.25■□□□□ 0.19
CCDC90B-218ENST00000533761 POTEFA5A3E0 1075 aa16.24■□□□□ 0.19
CCDC90B-218ENST00000533761 PTPRKQ15262 1439 aa16.24■□□□□ 0.19
CCDC90B-218ENST00000533761 ATP10AO60312 1499 aa16.23■□□□□ 0.19
CCDC90B-218ENST00000533761 ACIN1Q9UKV3 1341 aaKnown RBP16.23■□□□□ 0.19
CCDC90B-218ENST00000533761 NCOA1Q15788 1441 aa16.23■□□□□ 0.19
CCDC90B-218ENST00000533761 SPDYE4A6NLX3 237 aa16.23■□□□□ 0.19
CCDC90B-218ENST00000533761 ARHGEF40Q8TER5 1519 aa16.22■□□□□ 0.19
CCDC90B-218ENST00000533761 RRP7BPQ9NSQ0 103 aa16.22■□□□□ 0.19
CCDC90B-218ENST00000533761 ROCK1Q13464 1354 aa16.22■□□□□ 0.19
CCDC90B-218ENST00000533761 ADGRL2O95490 1459 aa16.21■□□□□ 0.19
CCDC90B-218ENST00000533761 PLXNC1O60486 1568 aa16.21■□□□□ 0.18
CCDC90B-218ENST00000533761 DIP2CQ9Y2E4 1556 aa16.21■□□□□ 0.18
CCDC90B-218ENST00000533761 ABCA6Q8N139 1617 aa16.2■□□□□ 0.18
CCDC90B-218ENST00000533761 ADGBQ8N7X0 1667 aa16.2■□□□□ 0.18
CCDC90B-218ENST00000533761 KIF15Q9NS87 1388 aa16.2■□□□□ 0.18
CCDC90B-218ENST00000533761 SETD5Q9C0A6 1442 aa16.2■□□□□ 0.18
CCDC90B-218ENST00000533761 A2MP01023 1474 aa16.19■□□□□ 0.18
CCDC90B-218ENST00000533761 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
CCDC90B-218ENST00000533761 DHX29Q7Z478 1369 aaKnown RBP16.18■□□□□ 0.18
CCDC90B-218ENST00000533761 HRCP23327 699 aa16.18■□□□□ 0.18
CCDC90B-218ENST00000533761 TSPYL2Q9H2G4 693 aaPredicted RBP16.17■□□□□ 0.18
CCDC90B-218ENST00000533761 ARID4BQ4LE39 1312 aaPredicted RBP16.17■□□□□ 0.18
CCDC90B-218ENST00000533761 DUOX2Q9NRD8 1548 aa16.17■□□□□ 0.18
CCDC90B-218ENST00000533761 REREQ9P2R6 1566 aa16.17■□□□□ 0.18
CCDC90B-218ENST00000533761 CCER1Q8TC90 406 aaPredicted RBP16.17■□□□□ 0.18
CCDC90B-218ENST00000533761 BMP2KQ9NSY1 1161 aaPredicted RBP16.17■□□□□ 0.18
CCDC90B-218ENST00000533761 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
CCDC90B-218ENST00000533761 CCDC61Q9Y6R9 512 aa16.16■□□□□ 0.18
CCDC90B-218ENST00000533761 ANKRD50Q9ULJ7 1429 aa16.14■□□□□ 0.17
CCDC90B-218ENST00000533761 KIF12Q96FN5 646 aa16.13■□□□□ 0.17
CCDC90B-218ENST00000533761 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
CCDC90B-218ENST00000533761 ERBINQ96RT1 1412 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms