RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 BCORL1Q5H9F3 1711 aa16.51■□□□□ 0.23
ATM-222ENST00000533733 ATP10AO60312 1499 aa16.51■□□□□ 0.23
ATM-222ENST00000533733 EIF2AK4Q9P2K8 1649 aaKnown RBP16.5■□□□□ 0.23
ATM-222ENST00000533733 TRPM1Q7Z4N2 1603 aa16.49■□□□□ 0.23
ATM-222ENST00000533733 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
ATM-222ENST00000533733 C11orf95C9JLR9 678 aaPredicted RBP16.48■□□□□ 0.23
ATM-222ENST00000533733 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
ATM-222ENST00000533733 RTEL1-TNFRSF6BF6WH68 1400 aa16.47■□□□□ 0.23
ATM-222ENST00000533733 KTN1Q86UP2 1357 aaKnown RBP16.46■□□□□ 0.22
ATM-222ENST00000533733 E9PCH4 1651 aa16.45■□□□□ 0.22
ATM-222ENST00000533733 HNRNPUQ00839 825 aaKnown RBP eCLIP16.44■□□□□ 0.22
ATM-222ENST00000533733 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
ATM-222ENST00000533733 FKBP8Q14318 412 aa16.42■□□□□ 0.22
ATM-222ENST00000533733 CARD11Q9BXL7 1154 aa16.42■□□□□ 0.22
ATM-222ENST00000533733 DHX29Q7Z478 1369 aaKnown RBP16.41■□□□□ 0.22
ATM-222ENST00000533733 PRAG1Q86YV5 1406 aa16.41■□□□□ 0.22
ATM-222ENST00000533733 DEPDC5O75140 1603 aa16.41■□□□□ 0.22
ATM-222ENST00000533733 ABCA9Q8IUA7 1624 aa16.41■□□□□ 0.22
ATM-222ENST00000533733 GPRASP1Q5JY77 1395 aa16.41■□□□□ 0.22
ATM-222ENST00000533733 WDR7Q9Y4E6 1490 aa16.4■□□□□ 0.22
ATM-222ENST00000533733 ZBED9Q6R2W3 1325 aa16.39■□□□□ 0.21
ATM-222ENST00000533733 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
ATM-222ENST00000533733 ZFYVE16Q7Z3T8 1539 aa16.38■□□□□ 0.21
ATM-222ENST00000533733 ZNF326Q5BKZ1 582 aaKnown RBP16.38■□□□□ 0.21
ATM-222ENST00000533733 STAC3Q96MF2 364 aa16.38■□□□□ 0.21
ATM-222ENST00000533733 PRDM15P57071 1507 aaPredicted RBP16.38■□□□□ 0.21
ATM-222ENST00000533733 NEURL4Q96JN8 1562 aa16.37■□□□□ 0.21
ATM-222ENST00000533733 PLA2R1Q13018 1463 aa16.37■□□□□ 0.21
ATM-222ENST00000533733 CEP152O94986 1710 aa16.37■□□□□ 0.21
ATM-222ENST00000533733 RNF17Q9BXT8 1623 aaKnown RBP16.37■□□□□ 0.21
ATM-222ENST00000533733 INO80Q9ULG1 1556 aaPredicted RBP16.36■□□□□ 0.21
ATM-222ENST00000533733 DCAF11Q8TEB1 546 aa16.36■□□□□ 0.21
ATM-222ENST00000533733 A2MP01023 1474 aa16.36■□□□□ 0.21
ATM-222ENST00000533733 TET3O43151 1660 aa16.36■□□□□ 0.21
ATM-222ENST00000533733 SPHKAPQ2M3C7 1700 aa16.35■□□□□ 0.21
ATM-222ENST00000533733 TRPM2O94759 1503 aa16.34■□□□□ 0.21
ATM-222ENST00000533733 MYT1Q01538 1121 aa16.33■□□□□ 0.2
ATM-222ENST00000533733 TRAPPC8Q9Y2L5 1435 aa16.32■□□□□ 0.2
ATM-222ENST00000533733 ATP7AQ04656 1500 aa16.32■□□□□ 0.2
ATM-222ENST00000533733 CFAP74Q9C0B2 1584 aa16.32■□□□□ 0.2
ATM-222ENST00000533733 SPAG9O60271 1321 aaKnown RBP16.32■□□□□ 0.2
ATM-222ENST00000533733 RALBP1Q15311 655 aa16.31■□□□□ 0.2
ATM-222ENST00000533733 VWDEQ8N2E2 1590 aa16.3■□□□□ 0.2
ATM-222ENST00000533733 KDM2AQ9Y2K7 1162 aa16.3■□□□□ 0.2
ATM-222ENST00000533733 KIAA1210Q9ULL0 1709 aa16.3■□□□□ 0.2
ATM-222ENST00000533733 WASHC2CQ9Y4E1 1318 aa16.29■□□□□ 0.2
ATM-222ENST00000533733 FANCAO15360 1455 aa16.29■□□□□ 0.2
ATM-222ENST00000533733 COL17A1Q9UMD9 1497 aaPredicted RBP16.29■□□□□ 0.2
ATM-222ENST00000533733 BRD4O60885 1362 aaPredicted RBP16.29■□□□□ 0.2
ATM-222ENST00000533733 ST20-MTHFSA0A0A6YYL1 179 aa16.29■□□□□ 0.2
ATM-222ENST00000533733 FAM9BQ8IZU0 186 aa16.28■□□□□ 0.2
ATM-222ENST00000533733 PTPRTO14522 1441 aa16.28■□□□□ 0.2
ATM-222ENST00000533733 KANK1Q14678 1352 aa16.28■□□□□ 0.2
ATM-222ENST00000533733 CCDC184Q52MB2 194 aa16.28■□□□□ 0.2
ATM-222ENST00000533733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATM-222ENST00000533733 MADDQ8WXG6 1647 aa16.27■□□□□ 0.19
ATM-222ENST00000533733 IQGAP1P46940 1657 aa16.27■□□□□ 0.19
ATM-222ENST00000533733 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
ATM-222ENST00000533733 ZMYM4Q5VZL5 1548 aa16.25■□□□□ 0.19
ATM-222ENST00000533733 MYBBP1AQ9BQG0 1328 aaKnown RBP16.25■□□□□ 0.19
ATM-222ENST00000533733 ADGRL1O94910 1474 aa16.25■□□□□ 0.19
ATM-222ENST00000533733 SMG6Q86US8 1419 aaKnown RBP16.24■□□□□ 0.19
ATM-222ENST00000533733 INSRP06213 1382 aa16.24■□□□□ 0.19
ATM-222ENST00000533733 POLR3GLQ9BT43 218 aa16.23■□□□□ 0.19
ATM-222ENST00000533733 SCAPERQ9BY12 1400 aa16.23■□□□□ 0.19
ATM-222ENST00000533733 KIF1BO60333 1816 aa16.22■□□□□ 0.19
ATM-222ENST00000533733 BCANQ96GW7 911 aa16.22■□□□□ 0.19
ATM-222ENST00000533733 CLTCL1P53675 1640 aa16.22■□□□□ 0.19
ATM-222ENST00000533733 LRPPRCP42704 1394 aaKnown RBP16.22■□□□□ 0.19
ATM-222ENST00000533733 TMC1Q8TDI8 760 aa16.21■□□□□ 0.19
ATM-222ENST00000533733 ASXL2Q76L83 1435 aa16.2■□□□□ 0.18
ATM-222ENST00000533733 PARD3Q8TEW0 1356 aa16.2■□□□□ 0.18
ATM-222ENST00000533733 SLC24A1O60721 1099 aa16.2■□□□□ 0.18
ATM-222ENST00000533733 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
ATM-222ENST00000533733 LMTK2Q8IWU2 1503 aa16.2■□□□□ 0.18
ATM-222ENST00000533733 ZNF518AQ6AHZ1 1483 aa16.2■□□□□ 0.18
ATM-222ENST00000533733 TMF1P82094 1093 aa16.19■□□□□ 0.18
ATM-222ENST00000533733 PNISRQ8TF01 805 aaKnown RBP16.19■□□□□ 0.18
ATM-222ENST00000533733 KIDINS220Q9ULH0 1771 aa16.19■□□□□ 0.18
ATM-222ENST00000533733 PPP4R2Q9NY27 417 aa16.19■□□□□ 0.18
ATM-222ENST00000533733 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
ATM-222ENST00000533733 NLRP13Q86W25 1043 aa16.17■□□□□ 0.18
ATM-222ENST00000533733 EFCAB6Q5THR3 1501 aa16.17■□□□□ 0.18
ATM-222ENST00000533733 IFT172Q9UG01 1749 aa16.17■□□□□ 0.18
ATM-222ENST00000533733 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
ATM-222ENST00000533733 AFAP1Q8N556 730 aa16.16■□□□□ 0.18
ATM-222ENST00000533733 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
ATM-222ENST00000533733 MYOM2P54296 1465 aa16.16■□□□□ 0.18
ATM-222ENST00000533733 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
ATM-222ENST00000533733 NBPF1Q3BBV0 1214 aa16.16■□□□□ 0.18
ATM-222ENST00000533733 TESK2Q96S53 571 aa16.16■□□□□ 0.18
ATM-222ENST00000533733 SYNMO15061 1565 aa16.16■□□□□ 0.18
ATM-222ENST00000533733 EIF3AQ14152 1382 aaKnown RBP16.15■□□□□ 0.18
ATM-222ENST00000533733 MAP3K4Q9Y6R4 1608 aa16.15■□□□□ 0.18
ATM-222ENST00000533733 NPM1P06748 294 aaKnown RBP eCLIP16.14■□□□□ 0.17
ATM-222ENST00000533733 PER1O15534 1290 aaPredicted RBP16.13■□□□□ 0.17
ATM-222ENST00000533733 MLH3Q9UHC1 1453 aa16.12■□□□□ 0.17
ATM-222ENST00000533733 RNF123Q5XPI4 1314 aa16.12■□□□□ 0.17
ATM-222ENST00000533733 HECW2Q9P2P5 1572 aa16.11■□□□□ 0.17
ATM-222ENST00000533733 DISP3Q9P2K9 1392 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms