RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ZNF142P52746 1687 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-225ENST00000533704 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
CAPN1-225ENST00000533704 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
CAPN1-225ENST00000533704 EIF2AK4Q9P2K8 1649 aaKnown RBP16.23■□□□□ 0.19
CAPN1-225ENST00000533704 RNF17Q9BXT8 1623 aaKnown RBP16.22■□□□□ 0.19
CAPN1-225ENST00000533704 ABCC5O15440 1437 aa16.21■□□□□ 0.19
CAPN1-225ENST00000533704 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
CAPN1-225ENST00000533704 CEP152O94986 1710 aa16.21■□□□□ 0.19
CAPN1-225ENST00000533704 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.18
CAPN1-225ENST00000533704 DAPK1P53355 1430 aa16.2■□□□□ 0.18
CAPN1-225ENST00000533704 DUOX2Q9NRD8 1548 aa16.2■□□□□ 0.18
CAPN1-225ENST00000533704 FAM135AQ9P2D6 1515 aa16.2■□□□□ 0.18
CAPN1-225ENST00000533704 TCOF1Q13428 1488 aaKnown RBP16.2■□□□□ 0.18
CAPN1-225ENST00000533704 SHANK2Q9UPX8 1470 aa16.2■□□□□ 0.18
CAPN1-225ENST00000533704 KIF15Q9NS87 1388 aa16.19■□□□□ 0.18
CAPN1-225ENST00000533704 FAM50AQ14320 339 aaKnown RBP16.19■□□□□ 0.18
CAPN1-225ENST00000533704 RRP7BPQ9NSQ0 103 aa16.19■□□□□ 0.18
CAPN1-225ENST00000533704 NCOA1Q15788 1441 aa16.19■□□□□ 0.18
CAPN1-225ENST00000533704 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
CAPN1-225ENST00000533704 PZPP20742 1482 aa16.18■□□□□ 0.18
CAPN1-225ENST00000533704 FBXO31Q5XUX0 539 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-225ENST00000533704 CHIC2Q9UKJ5 165 aa16.18■□□□□ 0.18
CAPN1-225ENST00000533704 TNRQ92752 1358 aa16.17■□□□□ 0.18
CAPN1-225ENST00000533704 FBXO41Q8TF61 875 aa16.17■□□□□ 0.18
CAPN1-225ENST00000533704 ABCC3O15438 1527 aa16.17■□□□□ 0.18
CAPN1-225ENST00000533704 MROH1Q8NDA8 1641 aa16.16■□□□□ 0.18
CAPN1-225ENST00000533704 A2ML1A8K2U0 1454 aa16.15■□□□□ 0.18
CAPN1-225ENST00000533704 NCKAP5LQ9HCH0 1330 aa16.15■□□□□ 0.18
CAPN1-225ENST00000533704 PTPRTO14522 1441 aa16.14■□□□□ 0.17
CAPN1-225ENST00000533704 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
CAPN1-225ENST00000533704 CERKQ8TCT0 537 aa16.14■□□□□ 0.17
CAPN1-225ENST00000533704 ANKRD30AQ9BXX3 1397 aa16.13■□□□□ 0.17
CAPN1-225ENST00000533704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.175e-6■■□□□ 13.2
CAPN1-225ENST00000533704 ERBINQ96RT1 1412 aa16.12■□□□□ 0.17
CAPN1-225ENST00000533704 POLR1AO95602 1720 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-225ENST00000533704 PLA2R1Q13018 1463 aa16.1■□□□□ 0.17
CAPN1-225ENST00000533704 PRDM15P57071 1507 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-225ENST00000533704 DEPDC5O75140 1603 aa16.09■□□□□ 0.17
CAPN1-225ENST00000533704 PKD2Q13563 968 aa16.08■□□□□ 0.16
CAPN1-225ENST00000533704 ERVK-7P63135 1459 aa16.08■□□□□ 0.16
CAPN1-225ENST00000533704 KANK1Q14678 1352 aa16.07■□□□□ 0.16
CAPN1-225ENST00000533704 NLRP1Q9C000 1473 aa16.07■□□□□ 0.16
CAPN1-225ENST00000533704 SPATA31D1Q6ZQQ2 1576 aa16.07■□□□□ 0.16
CAPN1-225ENST00000533704 UGGT1Q9NYU2 1555 aa16.07■□□□□ 0.16
CAPN1-225ENST00000533704 ADGRL2O95490 1459 aa16.05■□□□□ 0.16
CAPN1-225ENST00000533704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.04■□□□□ 0.16
CAPN1-225ENST00000533704 ITGAEP38570 1179 aa16.04■□□□□ 0.16
CAPN1-225ENST00000533704 LTBP4Q8N2S1 1624 aa16.04■□□□□ 0.16
CAPN1-225ENST00000533704 THEMISQ8N1K5 641 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-225ENST00000533704 ZNF335Q9H4Z2 1342 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-225ENST00000533704 NEURL4Q96JN8 1562 aa16.02■□□□□ 0.16
CAPN1-225ENST00000533704 UBR1Q8IWV7 1749 aa16.02■□□□□ 0.15
CAPN1-225ENST00000533704 ANKRD50Q9ULJ7 1429 aa16.02■□□□□ 0.15
CAPN1-225ENST00000533704 ANKLE2Q86XL3 938 aa16.01■□□□□ 0.15
CAPN1-225ENST00000533704 ARHGAP31Q2M1Z3 1444 aa15.99■□□□□ 0.15
CAPN1-225ENST00000533704 VWDEQ8N2E2 1590 aa15.99■□□□□ 0.15
CAPN1-225ENST00000533704 PIK3C2BO00750 1634 aa15.98■□□□□ 0.15
CAPN1-225ENST00000533704 IQGAP1P46940 1657 aa15.97■□□□□ 0.15
CAPN1-225ENST00000533704 EFCAB6Q5THR3 1501 aa15.97■□□□□ 0.15
CAPN1-225ENST00000533704 LMTK2Q8IWU2 1503 aa15.97■□□□□ 0.15
CAPN1-225ENST00000533704 NPHP4O75161 1426 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-225ENST00000533704 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
CAPN1-225ENST00000533704 TET3O43151 1660 aa15.95■□□□□ 0.14
CAPN1-225ENST00000533704 UNC13BO14795 1591 aa15.94■□□□□ 0.14
CAPN1-225ENST00000533704 SYNMO15061 1565 aa15.94■□□□□ 0.14
CAPN1-225ENST00000533704 GCC2Q8IWJ2 1684 aa15.94■□□□□ 0.14
CAPN1-225ENST00000533704 IQSEC2Q5JU85 1478 aa15.93■□□□□ 0.14
CAPN1-225ENST00000533704 ROCK1Q13464 1354 aa15.93■□□□□ 0.14
CAPN1-225ENST00000533704 MYO5BQ9ULV0 1848 aa15.91■□□□□ 0.14
CAPN1-225ENST00000533704 MED14O60244 1454 aa15.91■□□□□ 0.14
CAPN1-225ENST00000533704 SCAF11Q99590 1463 aaKnown RBP15.91■□□□□ 0.14
CAPN1-225ENST00000533704 TXNDC2Q86VQ3 553 aa15.9■□□□□ 0.14
CAPN1-225ENST00000533704 NOS1P29475 1434 aa15.89■□□□□ 0.13
CAPN1-225ENST00000533704 UBAP1LF5GYI3 381 aa15.89■□□□□ 0.13
CAPN1-225ENST00000533704 IDI1Q13907 227 aa15.89■□□□□ 0.13
CAPN1-225ENST00000533704 IQGAP3Q86VI3 1631 aa15.89■□□□□ 0.13
CAPN1-225ENST00000533704 E9PCH4 1651 aa15.89■□□□□ 0.13
CAPN1-225ENST00000533704 KDM5AP29375 1690 aaKnown RBP15.89■□□□□ 0.13
CAPN1-225ENST00000533704 SLIT1O75093 1534 aa15.89■□□□□ 0.13
CAPN1-225ENST00000533704 EID1Q9Y6B2 187 aa15.88■□□□□ 0.13
CAPN1-225ENST00000533704 RPRD2Q5VT52 1461 aaKnown RBP15.88■□□□□ 0.13
CAPN1-225ENST00000533704 ARHGAP23Q9P227 1491 aa15.88■□□□□ 0.13
CAPN1-225ENST00000533704 CPS1P31327 1500 aa15.88■□□□□ 0.13
CAPN1-225ENST00000533704 STRCP1A6NGW2 1772 aa15.87■□□□□ 0.13
CAPN1-225ENST00000533704 RRBP1Q9P2E9 1410 aaKnown RBP15.87■□□□□ 0.13
CAPN1-225ENST00000533704 LTKP29376 864 aa15.87■□□□□ 0.13
CAPN1-225ENST00000533704 ADGRB3O60242 1522 aa15.87■□□□□ 0.13
CAPN1-225ENST00000533704 NUP155O75694 1391 aa15.86■□□□□ 0.13
CAPN1-225ENST00000533704 TMEM2Q9UHN6 1383 aa15.86■□□□□ 0.13
CAPN1-225ENST00000533704 SLC52A1Q9NWF4 448 aa15.84■□□□□ 0.13
CAPN1-225ENST00000533704 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
CAPN1-225ENST00000533704 CHGAP10645 457 aaKnown RBP15.83■□□□□ 0.12
CAPN1-225ENST00000533704 SENP3Q9H4L4 574 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-225ENST00000533704 BCANQ96GW7 911 aa15.81■□□□□ 0.12
CAPN1-225ENST00000533704 TMEM131LA2VDJ0 1609 aa15.8■□□□□ 0.12
CAPN1-225ENST00000533704 PIP4K2BP78356 416 aa15.8■□□□□ 0.12
CAPN1-225ENST00000533704 SPHKAPQ2M3C7 1700 aa15.79■□□□□ 0.12
CAPN1-225ENST00000533704 PPP1R15AO75807 674 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-225ENST00000533704 LRRC7Q96NW7 1537 aa15.78■□□□□ 0.12
CAPN1-225ENST00000533704 NAIPQ13075 1403 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms