RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 KDM5DQ9BY66 1539 aa18.43■□□□□ 0.54
SYVN1-215ENST00000533685 UNC13BO14795 1591 aa18.42■□□□□ 0.54
SYVN1-215ENST00000533685 PRDM15P57071 1507 aaPredicted RBP18.42■□□□□ 0.54
SYVN1-215ENST00000533685 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
SYVN1-215ENST00000533685 KIF3BO15066 747 aa18.39■□□□□ 0.53
SYVN1-215ENST00000533685 VWDEQ8N2E2 1590 aa18.38■□□□□ 0.53
SYVN1-215ENST00000533685 MROH1Q8NDA8 1641 aa18.37■□□□□ 0.53
SYVN1-215ENST00000533685 LMTK2Q8IWU2 1503 aa18.35■□□□□ 0.53
SYVN1-215ENST00000533685 KANK1Q14678 1352 aa18.35■□□□□ 0.53
SYVN1-215ENST00000533685 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
SYVN1-215ENST00000533685 NUP155O75694 1391 aa18.34■□□□□ 0.53
SYVN1-215ENST00000533685 SIGLEC1Q9BZZ2 1709 aa18.33■□□□□ 0.52
SYVN1-215ENST00000533685 ZC3H13Q5T200 1668 aaKnown RBP18.31■□□□□ 0.52
SYVN1-215ENST00000533685 PZPP20742 1482 aa18.31■□□□□ 0.52
SYVN1-215ENST00000533685 TRIM52Q96A61 297 aa18.29■□□□□ 0.52
SYVN1-215ENST00000533685 CNTLNQ9NXG0 1405 aa18.29■□□□□ 0.52
SYVN1-215ENST00000533685 ABCC3O15438 1527 aa18.28■□□□□ 0.52
SYVN1-215ENST00000533685 GGT6Q6P531 493 aa18.28■□□□□ 0.52
SYVN1-215ENST00000533685 ARID4BQ4LE39 1312 aaPredicted RBP18.27■□□□□ 0.52
SYVN1-215ENST00000533685 ARHGAP31Q2M1Z3 1444 aa18.27■□□□□ 0.52
SYVN1-215ENST00000533685 DHX57Q6P158 1386 aaKnown RBP18.27■□□□□ 0.51
SYVN1-215ENST00000533685 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
SYVN1-215ENST00000533685 TET3O43151 1660 aa18.26■□□□□ 0.51
SYVN1-215ENST00000533685 MPHOSPH9Q99550 1183 aa18.26■□□□□ 0.51
SYVN1-215ENST00000533685 SLC4A1APQ9BWU0 796 aaKnown RBP18.26■□□□□ 0.51
SYVN1-215ENST00000533685 CLSPNQ9HAW4 1339 aa18.25■□□□□ 0.51
SYVN1-215ENST00000533685 WASHC2CQ9Y4E1 1318 aa18.25■□□□□ 0.51
SYVN1-215ENST00000533685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.51
SYVN1-215ENST00000533685 EFCAB6Q5THR3 1501 aa18.24■□□□□ 0.51
SYVN1-215ENST00000533685 MROH2AA6NES4 1674 aa18.21■□□□□ 0.51
SYVN1-215ENST00000533685 CAMSAP1Q5T5Y3 1602 aa18.2■□□□□ 0.5
SYVN1-215ENST00000533685 ADAMTSL3P82987 1691 aa18.19■□□□□ 0.5
SYVN1-215ENST00000533685 PKD2Q13563 968 aa18.19■□□□□ 0.5
SYVN1-215ENST00000533685 NPATQ14207 1427 aa18.19■□□□□ 0.5
SYVN1-215ENST00000533685 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
SYVN1-215ENST00000533685 CEP152O94986 1710 aa18.18■□□□□ 0.5
SYVN1-215ENST00000533685 PTPRTO14522 1441 aa18.17■□□□□ 0.5
SYVN1-215ENST00000533685 MLECQ14165 292 aa18.17■□□□□ 0.5
SYVN1-215ENST00000533685 ZMYM3Q14202 1370 aa18.16■□□□□ 0.5
SYVN1-215ENST00000533685 ANKRD30BQ9BXX2 1392 aa18.16■□□□□ 0.5
SYVN1-215ENST00000533685 E9PCH4 1651 aa18.15■□□□□ 0.5
SYVN1-215ENST00000533685 CLTCQ00610 1675 aaKnown RBP18.15■□□□□ 0.5
SYVN1-215ENST00000533685 FER1L4A9Z1Z3 1794 aa18.14■□□□□ 0.5
SYVN1-215ENST00000533685 NOS1P29475 1434 aa18.14■□□□□ 0.49
SYVN1-215ENST00000533685 TRPM2O94759 1503 aa18.13■□□□□ 0.49
SYVN1-215ENST00000533685 CCER1Q8TC90 406 aaPredicted RBP18.12■□□□□ 0.49
SYVN1-215ENST00000533685 MADDQ8WXG6 1647 aa18.12■□□□□ 0.49
SYVN1-215ENST00000533685 SPATA31D1Q6ZQQ2 1576 aa18.11■□□□□ 0.49
SYVN1-215ENST00000533685 ERVK-7P63135 1459 aa18.1■□□□□ 0.49
SYVN1-215ENST00000533685 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
SYVN1-215ENST00000533685 SPHKAPQ2M3C7 1700 aa18.08■□□□□ 0.48
SYVN1-215ENST00000533685 CCDC144AA2RUR9 1427 aa18.06■□□□□ 0.48
SYVN1-215ENST00000533685 PREX1Q8TCU6 1659 aa18.06■□□□□ 0.48
SYVN1-215ENST00000533685 NEURL4Q96JN8 1562 aa18.06■□□□□ 0.48
SYVN1-215ENST00000533685 FOXD1Q16676 465 aa18.06■□□□□ 0.48
SYVN1-215ENST00000533685 SLC52A1Q9NWF4 448 aa18.06■□□□□ 0.48
SYVN1-215ENST00000533685 RIMS1Q86UR5 1692 aaKnown RBP18.06■□□□□ 0.48
SYVN1-215ENST00000533685 PTPRMP28827 1452 aa18.05■□□□□ 0.48
SYVN1-215ENST00000533685 C3P01024 1663 aa18.05■□□□□ 0.48
SYVN1-215ENST00000533685 PIK3C2BO00750 1634 aa18.03■□□□□ 0.48
SYVN1-215ENST00000533685 SYNMO15061 1565 aa18.03■□□□□ 0.48
SYVN1-215ENST00000533685 NLRP1Q9C000 1473 aa18.02■□□□□ 0.48
SYVN1-215ENST00000533685 TIMELESSQ9UNS1 1208 aa18.02■□□□□ 0.48
SYVN1-215ENST00000533685 TNRQ92752 1358 aa18.02■□□□□ 0.47
SYVN1-215ENST00000533685 FBXO31Q5XUX0 539 aaPredicted RBP18■□□□□ 0.47
SYVN1-215ENST00000533685 KDM4FA0A1W2PPD8 638 aa17.99■□□□□ 0.47
SYVN1-215ENST00000533685 CLTCL1P53675 1640 aa17.98■□□□□ 0.47
SYVN1-215ENST00000533685 KDM5AP29375 1690 aaKnown RBP17.97■□□□□ 0.47
SYVN1-215ENST00000533685 SPATA31E1Q6ZUB1 1445 aa17.97■□□□□ 0.47
SYVN1-215ENST00000533685 ADGRB3O60242 1522 aa17.96■□□□□ 0.47
SYVN1-215ENST00000533685 SETD1BQ9UPS6 1966 aaKnown RBP17.95■□□□□ 0.46
SYVN1-215ENST00000533685 CEBPAP49715 358 aaPredicted RBP17.95■□□□□ 0.46
SYVN1-215ENST00000533685 IDI1Q13907 227 aa17.95■□□□□ 0.46
SYVN1-215ENST00000533685 STAC3Q96MF2 364 aa17.94■□□□□ 0.46
SYVN1-215ENST00000533685 UGGT1Q9NYU2 1555 aa17.94■□□□□ 0.46
SYVN1-215ENST00000533685 SIN3AQ96ST3 1273 aa17.93■□□□□ 0.46
SYVN1-215ENST00000533685 ZEB1P37275 1124 aaPredicted RBP17.92■□□□□ 0.46
SYVN1-215ENST00000533685 A2ML1A8K2U0 1454 aa17.92■□□□□ 0.46
SYVN1-215ENST00000533685 MYO3AQ8NEV4 1616 aa17.91■□□□□ 0.46
SYVN1-215ENST00000533685 CFAP65Q6ZU64 1925 aaKnown RBP17.91■□□□□ 0.46
SYVN1-215ENST00000533685 RPGRIP1LQ68CZ1 1315 aa17.91■□□□□ 0.46
SYVN1-215ENST00000533685 KIF1BO60333 1816 aa17.91■□□□□ 0.46
SYVN1-215ENST00000533685 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
SYVN1-215ENST00000533685 TMEM131LA2VDJ0 1609 aa17.9■□□□□ 0.46
SYVN1-215ENST00000533685 ZNF142P52746 1687 aaPredicted RBP17.9■□□□□ 0.46
SYVN1-215ENST00000533685 NEUROD1Q13562 356 aa17.88■□□□□ 0.45
SYVN1-215ENST00000533685 UHRF1BP1Q6BDS2 1440 aa17.88■□□□□ 0.45
SYVN1-215ENST00000533685 CEP170BQ9Y4F5 1589 aaPredicted RBP17.87■□□□□ 0.45
SYVN1-215ENST00000533685 ZFYVE9O95405 1425 aa17.85■□□□□ 0.45
SYVN1-215ENST00000533685 MYOM2P54296 1465 aa17.85■□□□□ 0.45
SYVN1-215ENST00000533685 UBR1Q8IWV7 1749 aa17.85■□□□□ 0.45
SYVN1-215ENST00000533685 THEMISQ8N1K5 641 aaPredicted RBP17.84■□□□□ 0.45
SYVN1-215ENST00000533685 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
SYVN1-215ENST00000533685 STAG3Q9UJ98 1225 aa17.84■□□□□ 0.45
SYVN1-215ENST00000533685 SLIT1O75093 1534 aa17.83■□□□□ 0.45
SYVN1-215ENST00000533685 ARHGAP23Q9P227 1491 aa17.83■□□□□ 0.45
SYVN1-215ENST00000533685 TMEM2Q9UHN6 1383 aa17.83■□□□□ 0.45
SYVN1-215ENST00000533685 HDGFP51858 240 aaKnown RBP17.82■□□□□ 0.44
SYVN1-215ENST00000533685 NEXMIFQ5QGS0 1516 aa17.82■□□□□ 0.44
SYVN1-215ENST00000533685 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms