RNA–Protein interactions for RNA: ENST00000533668.5

FGFR1-240, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5

Gene FGFR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-240ENST00000533668 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
FGFR1-240ENST00000533668 ABCC1P33527 1531 aa13.32□□□□□ -0.28
FGFR1-240ENST00000533668 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
FGFR1-240ENST00000533668 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
FGFR1-240ENST00000533668 KIDINS220Q9ULH0 1771 aa13.3□□□□□ -0.28
FGFR1-240ENST00000533668 CASKIN1Q8WXD9 1431 aa13.3□□□□□ -0.28
FGFR1-240ENST00000533668 REREQ9P2R6 1566 aa13.29□□□□□ -0.28
FGFR1-240ENST00000533668 SETD1BQ9UPS6 1966 aaKnown RBP13.29□□□□□ -0.28
FGFR1-240ENST00000533668 SUPT6HQ7KZ85 1726 aaKnown RBP13.29□□□□□ -0.28
FGFR1-240ENST00000533668 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
FGFR1-240ENST00000533668 PLEKHG5O94827 1062 aa13.27□□□□□ -0.29
FGFR1-240ENST00000533668 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
FGFR1-240ENST00000533668 AFAP1Q8N556 730 aa13.27□□□□□ -0.29
FGFR1-240ENST00000533668 STRCQ7RTU9 1775 aa13.27□□□□□ -0.29
FGFR1-240ENST00000533668 SAMD9LQ8IVG5 1584 aa13.26□□□□□ -0.29
FGFR1-240ENST00000533668 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
FGFR1-240ENST00000533668 CEBPAP49715 358 aaPredicted RBP13.25□□□□□ -0.29
FGFR1-240ENST00000533668 SYCP2Q9BX26 1530 aa13.24□□□□□ -0.29
FGFR1-240ENST00000533668 MLH3Q9UHC1 1453 aa13.24□□□□□ -0.29
FGFR1-240ENST00000533668 UHRF1BP1Q6BDS2 1440 aa13.24□□□□□ -0.29
FGFR1-240ENST00000533668 TRAPPC8Q9Y2L5 1435 aa13.24□□□□□ -0.29
FGFR1-240ENST00000533668 ESF1Q9H501 851 aaKnown RBP13.24□□□□□ -0.29
FGFR1-240ENST00000533668 ZNF777Q9ULD5 760 aaPredicted RBP13.23□□□□□ -0.29
FGFR1-240ENST00000533668 MROH2AA6NES4 1674 aa13.23□□□□□ -0.29
FGFR1-240ENST00000533668 CLTCQ00610 1675 aaKnown RBP13.22□□□□□ -0.29
FGFR1-240ENST00000533668 AGLP35573 1532 aa13.21□□□□□ -0.29
FGFR1-240ENST00000533668 ADGBQ8N7X0 1667 aa13.2□□□□□ -0.3
FGFR1-240ENST00000533668 INO80Q9ULG1 1556 aaPredicted RBP13.2□□□□□ -0.3
FGFR1-240ENST00000533668 ATP7AQ04656 1500 aa13.19□□□□□ -0.3
FGFR1-240ENST00000533668 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
FGFR1-240ENST00000533668 CERKQ8TCT0 537 aa13.17□□□□□ -0.3
FGFR1-240ENST00000533668 GPATCH8Q9UKJ3 1502 aaKnown RBP13.17□□□□□ -0.3
FGFR1-240ENST00000533668 EHBP1L1Q8N3D4 1523 aa13.16□□□□□ -0.3
FGFR1-240ENST00000533668 MTUS2Q5JR59 1369 aa13.16□□□□□ -0.3
FGFR1-240ENST00000533668 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
FGFR1-240ENST00000533668 CNTLNQ9NXG0 1405 aa13.15□□□□□ -0.3
FGFR1-240ENST00000533668 MYO3AQ8NEV4 1616 aa13.15□□□□□ -0.3
FGFR1-240ENST00000533668 CCNB3Q8WWL7 1395 aa13.15□□□□□ -0.3
FGFR1-240ENST00000533668 PLEKHH2Q8IVE3 1493 aa13.15□□□□□ -0.3
FGFR1-240ENST00000533668 SPAG9O60271 1321 aaKnown RBP13.14□□□□□ -0.31
FGFR1-240ENST00000533668 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
FGFR1-240ENST00000533668 ZNF142P52746 1687 aaPredicted RBP13.14□□□□□ -0.31
FGFR1-240ENST00000533668 PLXNC1O60486 1568 aa13.13□□□□□ -0.31
FGFR1-240ENST00000533668 GABBR2O75899 941 aa13.13□□□□□ -0.31
FGFR1-240ENST00000533668 HNRNPMP52272 730 aaKnown RBP eCLIP13.13□□□□□ -0.31
FGFR1-240ENST00000533668 CFDP1Q9UEE9 299 aaPredicted RBP13.12□□□□□ -0.31
FGFR1-240ENST00000533668 CAMSAP1Q5T5Y3 1602 aa13.12□□□□□ -0.31
FGFR1-240ENST00000533668 A2MP01023 1474 aa13.11□□□□□ -0.31
FGFR1-240ENST00000533668 VASPP50552 380 aaPredicted RBP13.1□□□□□ -0.31
FGFR1-240ENST00000533668 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
FGFR1-240ENST00000533668 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
FGFR1-240ENST00000533668 KIAA1107Q9UPP5 1409 aa13.09□□□□□ -0.31
FGFR1-240ENST00000533668 POLR1AO95602 1720 aaPredicted RBP13.08□□□□□ -0.32
FGFR1-240ENST00000533668 CEP170BQ9Y4F5 1589 aaPredicted RBP13.08□□□□□ -0.32
FGFR1-240ENST00000533668 PTPRTO14522 1441 aa13.08□□□□□ -0.32
FGFR1-240ENST00000533668 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.32
FGFR1-240ENST00000533668 NPATQ14207 1427 aa13.07□□□□□ -0.32
FGFR1-240ENST00000533668 NCOA1Q15788 1441 aa13.07□□□□□ -0.32
FGFR1-240ENST00000533668 CEP162Q5TB80 1403 aa13.07□□□□□ -0.32
FGFR1-240ENST00000533668 GGT6Q6P531 493 aa13.06□□□□□ -0.32
FGFR1-240ENST00000533668 ZMYM3Q14202 1370 aa13.06□□□□□ -0.32
FGFR1-240ENST00000533668 CAMSAP2Q08AD1 1489 aa13.04□□□□□ -0.32
FGFR1-240ENST00000533668 LTBP4Q8N2S1 1624 aa13.04□□□□□ -0.32
FGFR1-240ENST00000533668 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
FGFR1-240ENST00000533668 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
FGFR1-240ENST00000533668 ZNF644Q9H582 1327 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-240ENST00000533668 NCOA2Q15596 1464 aa13.02□□□□□ -0.33
FGFR1-240ENST00000533668 CCDC141Q6ZP82 1450 aa13.02□□□□□ -0.33
FGFR1-240ENST00000533668 SPATA31D1Q6ZQQ2 1576 aa13.02□□□□□ -0.33
FGFR1-240ENST00000533668 PTPRKQ15262 1439 aa13.01□□□□□ -0.33
FGFR1-240ENST00000533668 MBD5Q9P267 1494 aa13.01□□□□□ -0.33
FGFR1-240ENST00000533668 DNMT1P26358 1616 aaKnown RBP13.01□□□□□ -0.33
FGFR1-240ENST00000533668 CFAP65Q6ZU64 1925 aaKnown RBP13.01□□□□□ -0.33
FGFR1-240ENST00000533668 KDM5DQ9BY66 1539 aa13□□□□□ -0.33
FGFR1-240ENST00000533668 IQSEC2Q5JU85 1478 aa13□□□□□ -0.33
FGFR1-240ENST00000533668 KLHL34Q8N239 644 aa13□□□□□ -0.33
FGFR1-240ENST00000533668 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
FGFR1-240ENST00000533668 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
FGFR1-240ENST00000533668 NCKAP5LQ9HCH0 1330 aa12.99□□□□□ -0.33
FGFR1-240ENST00000533668 NUBP1P53384 320 aa12.99□□□□□ -0.33
FGFR1-240ENST00000533668 ARHGEF5Q12774 1597 aa12.98□□□□□ -0.33
FGFR1-240ENST00000533668 DISP3Q9P2K9 1392 aa12.98□□□□□ -0.33
FGFR1-240ENST00000533668 CLCN6P51797 869 aa12.98□□□□□ -0.33
FGFR1-240ENST00000533668 CEP152O94986 1710 aa12.98□□□□□ -0.33
FGFR1-240ENST00000533668 ZC3H13Q5T200 1668 aaKnown RBP12.98□□□□□ -0.33
FGFR1-240ENST00000533668 A2ML1A8K2U0 1454 aa12.97□□□□□ -0.33
FGFR1-240ENST00000533668 DHX29Q7Z478 1369 aaKnown RBP12.96□□□□□ -0.33
FGFR1-240ENST00000533668 KIF3BO15066 747 aa12.96□□□□□ -0.33
FGFR1-240ENST00000533668 FAM135AQ9P2D6 1515 aa12.96□□□□□ -0.33
FGFR1-240ENST00000533668 TCOF1Q13428 1488 aaKnown RBP12.96□□□□□ -0.34
FGFR1-240ENST00000533668 ZNF335Q9H4Z2 1342 aaPredicted RBP12.95□□□□□ -0.34
FGFR1-240ENST00000533668 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
FGFR1-240ENST00000533668 CROCC2H7BZ55 1655 aa12.94□□□□□ -0.34
FGFR1-240ENST00000533668 PZPP20742 1482 aa12.94□□□□□ -0.34
FGFR1-240ENST00000533668 GALR2O43603 387 aaPredicted RBP12.94□□□□□ -0.34
FGFR1-240ENST00000533668 PKD2Q13563 968 aa12.94□□□□□ -0.34
FGFR1-240ENST00000533668 RNF17Q9BXT8 1623 aaKnown RBP12.94□□□□□ -0.34
FGFR1-240ENST00000533668 EIF2AK4Q9P2K8 1649 aaKnown RBP12.94□□□□□ -0.34
FGFR1-240ENST00000533668 VPS8Q8N3P4 1428 aa12.93□□□□□ -0.34
FGFR1-240ENST00000533668 NEURL4Q96JN8 1562 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms