RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 IQGAP3Q86VI3 1631 aa15.35■□□□□ 0.05
CAPRIN1-215ENST00000533657 MROH1Q8NDA8 1641 aa15.35■□□□□ 0.05
CAPRIN1-215ENST00000533657 RAB3GAP2Q9H2M9 1393 aa15.35■□□□□ 0.05
CAPRIN1-215ENST00000533657 RAPGEF3O95398 923 aa15.35■□□□□ 0.05
CAPRIN1-215ENST00000533657 ZC3H13Q5T200 1668 aaKnown RBP15.34■□□□□ 0.05
CAPRIN1-215ENST00000533657 YEATS2Q9ULM3 1422 aa15.34■□□□□ 0.05
CAPRIN1-215ENST00000533657 ITGAEP38570 1179 aa15.34■□□□□ 0.05
CAPRIN1-215ENST00000533657 CHIC2Q9UKJ5 165 aa15.32■□□□□ 0.04
CAPRIN1-215ENST00000533657 SIGLEC1Q9BZZ2 1709 aa15.32■□□□□ 0.04
CAPRIN1-215ENST00000533657 LMTK2Q8IWU2 1503 aa15.3■□□□□ 0.04
CAPRIN1-215ENST00000533657 RRP7BPQ9NSQ0 103 aa15.3■□□□□ 0.04
CAPRIN1-215ENST00000533657 TET3O43151 1660 aa15.28■□□□□ 0.04
CAPRIN1-215ENST00000533657 PZPP20742 1482 aa15.26■□□□□ 0.03
CAPRIN1-215ENST00000533657 MROH2AA6NES4 1674 aa15.25■□□□□ 0.03
CAPRIN1-215ENST00000533657 PPP6R1Q9UPN7 881 aa15.23■□□□□ 0.03
CAPRIN1-215ENST00000533657 CEP152O94986 1710 aa15.22■□□□□ 0.03
CAPRIN1-215ENST00000533657 CAMSAP1Q5T5Y3 1602 aa15.22■□□□□ 0.03
CAPRIN1-215ENST00000533657 ABCC3O15438 1527 aa15.22■□□□□ 0.03
CAPRIN1-215ENST00000533657 EFCAB6Q5THR3 1501 aa15.21■□□□□ 0.03
CAPRIN1-215ENST00000533657 DHX57Q6P158 1386 aaKnown RBP15.2■□□□□ 0.02
CAPRIN1-215ENST00000533657 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
CAPRIN1-215ENST00000533657 E9PCH4 1651 aa15.19■□□□□ 0.02
CAPRIN1-215ENST00000533657 KANK1Q14678 1352 aa15.19■□□□□ 0.02
CAPRIN1-215ENST00000533657 RPRD2Q5VT52 1461 aaKnown RBP15.19■□□□□ 0.02
CAPRIN1-215ENST00000533657 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
CAPRIN1-215ENST00000533657 ARHGAP31Q2M1Z3 1444 aa15.18■□□□□ 0.02
CAPRIN1-215ENST00000533657 ADAMTSL3P82987 1691 aa15.17■□□□□ 0.02
CAPRIN1-215ENST00000533657 NUP155O75694 1391 aa15.16■□□□□ 0.02
CAPRIN1-215ENST00000533657 FER1L4A9Z1Z3 1794 aa15.16■□□□□ 0.02
CAPRIN1-215ENST00000533657 CLTCQ00610 1675 aaKnown RBP15.16■□□□□ 0.02
CAPRIN1-215ENST00000533657 SPHKAPQ2M3C7 1700 aa15.16■□□□□ 0.02
CAPRIN1-215ENST00000533657 CNTLNQ9NXG0 1405 aa15.15■□□□□ 0.02
CAPRIN1-215ENST00000533657 KIF3BO15066 747 aa15.15■□□□□ 0.02
CAPRIN1-215ENST00000533657 NEURL4Q96JN8 1562 aa15.13■□□□□ 0.01
CAPRIN1-215ENST00000533657 TRPM2O94759 1503 aa15.12■□□□□ 0.01
CAPRIN1-215ENST00000533657 PTPRTO14522 1441 aa15.11■□□□□ 0.01
CAPRIN1-215ENST00000533657 MPHOSPH9Q99550 1183 aa15.11■□□□□ 0.01
CAPRIN1-215ENST00000533657 PREX1Q8TCU6 1659 aa15.11■□□□□ 0.01
CAPRIN1-215ENST00000533657 PIK3C2BO00750 1634 aa15.09■□□□□ 0.01
CAPRIN1-215ENST00000533657 SPATA31D1Q6ZQQ2 1576 aa15.09■□□□□ 0.01
CAPRIN1-215ENST00000533657 TRIM52Q96A61 297 aa15.09■□□□□ 0.01
CAPRIN1-215ENST00000533657 MADDQ8WXG6 1647 aa15.08■□□□□ 0
CAPRIN1-215ENST00000533657 C3P01024 1663 aa15.07■□□□□ 0
CAPRIN1-215ENST00000533657 ANKRD30BQ9BXX2 1392 aa15.07■□□□□ 0
CAPRIN1-215ENST00000533657 NOS1P29475 1434 aa15.07■□□□□ 0
CAPRIN1-215ENST00000533657 NPATQ14207 1427 aa15.07■□□□□ 0
CAPRIN1-215ENST00000533657 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
CAPRIN1-215ENST00000533657 KDM5AP29375 1690 aaKnown RBP15.06■□□□□ 0
CAPRIN1-215ENST00000533657 SYNMO15061 1565 aa15.05■□□□□ -0
CAPRIN1-215ENST00000533657 PLA2R1Q13018 1463 aa15.04■□□□□ -0
CAPRIN1-215ENST00000533657 RIMS1Q86UR5 1692 aaKnown RBP15.04■□□□□ -0
CAPRIN1-215ENST00000533657 ERVK-7P63135 1459 aa15.04■□□□□ -0
CAPRIN1-215ENST00000533657 WASHC2CQ9Y4E1 1318 aa15.03■□□□□ -0
CAPRIN1-215ENST00000533657 CLTCL1P53675 1640 aa15.03■□□□□ -0
CAPRIN1-215ENST00000533657 GGT6Q6P531 493 aa15.03■□□□□ -0
CAPRIN1-215ENST00000533657 PKD2Q13563 968 aa15.02■□□□□ -0
CAPRIN1-215ENST00000533657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02□□□□□ -0.019e-10■□□□□ 10.6
CAPRIN1-215ENST00000533657 KIF1BO60333 1816 aa15.01□□□□□ -0.01
CAPRIN1-215ENST00000533657 ARID4BQ4LE39 1312 aaPredicted RBP14.99□□□□□ -0.01
CAPRIN1-215ENST00000533657 ZMYM3Q14202 1370 aa14.98□□□□□ -0.01
CAPRIN1-215ENST00000533657 CCER1Q8TC90 406 aaPredicted RBP14.98□□□□□ -0.01
CAPRIN1-215ENST00000533657 ZNF142P52746 1687 aaPredicted RBP14.98□□□□□ -0.01
CAPRIN1-215ENST00000533657 ADGRB3O60242 1522 aa14.98□□□□□ -0.01
CAPRIN1-215ENST00000533657 IFT172Q9UG01 1749 aa14.98□□□□□ -0.01
CAPRIN1-215ENST00000533657 TIMELESSQ9UNS1 1208 aa14.97□□□□□ -0.01
CAPRIN1-215ENST00000533657 BCL11AQ9H165 835 aa14.96□□□□□ -0.01
CAPRIN1-215ENST00000533657 CCDC144AA2RUR9 1427 aa14.96□□□□□ -0.01
CAPRIN1-215ENST00000533657 MYO3AQ8NEV4 1616 aa14.95□□□□□ -0.02
CAPRIN1-215ENST00000533657 NLRP1Q9C000 1473 aa14.95□□□□□ -0.02
CAPRIN1-215ENST00000533657 TMEM131LA2VDJ0 1609 aa14.95□□□□□ -0.02
CAPRIN1-215ENST00000533657 SPATA31E1Q6ZUB1 1445 aa14.94□□□□□ -0.02
CAPRIN1-215ENST00000533657 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
CAPRIN1-215ENST00000533657 ZEB1P37275 1124 aaPredicted RBP14.92□□□□□ -0.02
CAPRIN1-215ENST00000533657 PTPRMP28827 1452 aa14.92□□□□□ -0.02
CAPRIN1-215ENST00000533657 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
CAPRIN1-215ENST00000533657 MLECQ14165 292 aa14.91□□□□□ -0.02
CAPRIN1-215ENST00000533657 UGGT1Q9NYU2 1555 aa14.91□□□□□ -0.02
CAPRIN1-215ENST00000533657 PRKCSHP14314 528 aaPredicted RBP14.91□□□□□ -0.02
CAPRIN1-215ENST00000533657 SLC52A1Q9NWF4 448 aa14.91□□□□□ -0.02
CAPRIN1-215ENST00000533657 PPLO60437 1756 aa14.91□□□□□ -0.02
CAPRIN1-215ENST00000533657 CENPBP07199 599 aaPredicted RBP14.9□□□□□ -0.02
CAPRIN1-215ENST00000533657 CFAP65Q6ZU64 1925 aaKnown RBP14.9□□□□□ -0.02
CAPRIN1-215ENST00000533657 TNRQ92752 1358 aa14.9□□□□□ -0.02
CAPRIN1-215ENST00000533657 FOXD1Q16676 465 aa14.9□□□□□ -0.02
CAPRIN1-215ENST00000533657 MYO5BQ9ULV0 1848 aa14.89□□□□□ -0.03
CAPRIN1-215ENST00000533657 SETD1BQ9UPS6 1966 aaKnown RBP14.88□□□□□ -0.03
CAPRIN1-215ENST00000533657 MYOM2P54296 1465 aa14.88□□□□□ -0.03
CAPRIN1-215ENST00000533657 A2ML1A8K2U0 1454 aa14.87□□□□□ -0.03
CAPRIN1-215ENST00000533657 CEP170BQ9Y4F5 1589 aaPredicted RBP14.87□□□□□ -0.03
CAPRIN1-215ENST00000533657 STAC3Q96MF2 364 aa14.86□□□□□ -0.03
CAPRIN1-215ENST00000533657 NEXMIFQ5QGS0 1516 aa14.86□□□□□ -0.03
CAPRIN1-215ENST00000533657 KIAA1210Q9ULL0 1709 aa14.86□□□□□ -0.03
CAPRIN1-215ENST00000533657 NRXN1Q9ULB1 1477 aa14.85□□□□□ -0.03
CAPRIN1-215ENST00000533657 UHRF1BP1Q6BDS2 1440 aa14.85□□□□□ -0.03
CAPRIN1-215ENST00000533657 ZFYVE9O95405 1425 aa14.84□□□□□ -0.03
CAPRIN1-215ENST00000533657 GTF3C3Q9Y5Q9 886 aa14.84□□□□□ -0.03
CAPRIN1-215ENST00000533657 SLIT1O75093 1534 aa14.84□□□□□ -0.03
CAPRIN1-215ENST00000533657 SIN3AQ96ST3 1273 aa14.84□□□□□ -0.03
CAPRIN1-215ENST00000533657 RPGRIP1LQ68CZ1 1315 aa14.83□□□□□ -0.03
CAPRIN1-215ENST00000533657 FBXO31Q5XUX0 539 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms