RNA–Protein interactions for RNA: ENST00000533568.5

PAK1-220, Transcript of p21 (RAC1) activated kinase 1, humanhuman

TSL 3

Gene PAK1, Length 762 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-220ENST00000533568 THEMISQ8N1K5 641 aaPredicted RBP27.66■■■□□ 2.02
PAK1-220ENST00000533568 SYCP2Q9BX26 1530 aa27.66■■■□□ 2.02
PAK1-220ENST00000533568 IQGAP1P46940 1657 aa27.65■■■□□ 2.02
PAK1-220ENST00000533568 LRRIQ1Q96JM4 1722 aa27.64■■■□□ 2.01
PAK1-220ENST00000533568 HNRNPMP52272 730 aaKnown RBP eCLIP27.63■■■□□ 2.01
PAK1-220ENST00000533568 INO80Q9ULG1 1556 aaPredicted RBP27.63■■■□□ 2.01
PAK1-220ENST00000533568 CDC42BPAQ5VT25 1732 aa27.63■■■□□ 2.01
PAK1-220ENST00000533568 ZNF777Q9ULD5 760 aaPredicted RBP27.62■■■□□ 2.01
PAK1-220ENST00000533568 FAM135BQ49AJ0 1406 aa27.61■■■□□ 2.01
PAK1-220ENST00000533568 UGGT1Q9NYU2 1555 aa27.58■■■□□ 2.01
PAK1-220ENST00000533568 PZPP20742 1482 aa27.57■■■□□ 2
PAK1-220ENST00000533568 FAM135AQ9P2D6 1515 aa27.57■■■□□ 2
PAK1-220ENST00000533568 MIA2Q96PC5 1412 aa27.55■■■□□ 2
PAK1-220ENST00000533568 NLRP1Q9C000 1473 aa27.55■■■□□ 2
PAK1-220ENST00000533568 ARHGAP35Q9NRY4 1499 aa27.55■■■□□ 2
PAK1-220ENST00000533568 KIAA1107Q9UPP5 1409 aa27.51■■□□□ 1.99
PAK1-220ENST00000533568 XIRP1Q702N8 1843 aaKnown RBP27.51■■□□□ 1.99
PAK1-220ENST00000533568 EEA1Q15075 1411 aa27.5■■□□□ 1.99
PAK1-220ENST00000533568 ADGBQ8N7X0 1667 aa27.49■■□□□ 1.99
PAK1-220ENST00000533568 GPATCH8Q9UKJ3 1502 aaKnown RBP27.47■■□□□ 1.99
PAK1-220ENST00000533568 ZC3H13Q5T200 1668 aaKnown RBP27.47■■□□□ 1.99
PAK1-220ENST00000533568 KDM5DQ9BY66 1539 aa27.44■■□□□ 1.98
PAK1-220ENST00000533568 TRIM52Q96A61 297 aa27.42■■□□□ 1.98
PAK1-220ENST00000533568 PLEKHH2Q8IVE3 1493 aa27.42■■□□□ 1.98
PAK1-220ENST00000533568 ROBO1Q9Y6N7 1651 aa27.41■■□□□ 1.98
PAK1-220ENST00000533568 DHX29Q7Z478 1369 aaKnown RBP27.4■■□□□ 1.98
PAK1-220ENST00000533568 CCDC18Q5T9S5 1454 aa27.38■■□□□ 1.97
PAK1-220ENST00000533568 WASHC2CQ9Y4E1 1318 aa27.37■■□□□ 1.97
PAK1-220ENST00000533568 KIF3BO15066 747 aa27.36■■□□□ 1.97
PAK1-220ENST00000533568 CFDP1Q9UEE9 299 aaPredicted RBP27.35■■□□□ 1.97
PAK1-220ENST00000533568 JCADQ9P266 1359 aa27.35■■□□□ 1.97
PAK1-220ENST00000533568 ZNF772Q68DY9 489 aaPredicted RBP27.31■■□□□ 1.96
PAK1-220ENST00000533568 TMEM94Q12767 1356 aa27.31■■□□□ 1.96
PAK1-220ENST00000533568 SCAF11Q99590 1463 aaKnown RBP27.31■■□□□ 1.96
PAK1-220ENST00000533568 RTEL1-TNFRSF6BF6WH68 1400 aa27.3■■□□□ 1.96
PAK1-220ENST00000533568 CASKIN1Q8WXD9 1431 aa27.3■■□□□ 1.96
PAK1-220ENST00000533568 LRP6O75581 1613 aa27.3■■□□□ 1.96
PAK1-220ENST00000533568 LTKP29376 864 aa27.29■■□□□ 1.96
PAK1-220ENST00000533568 MBD5Q9P267 1494 aa27.26■■□□□ 1.95
PAK1-220ENST00000533568 UBTFP17480 764 aaKnown RBP27.26■■□□□ 1.95
PAK1-220ENST00000533568 MAP3K1Q13233 1512 aa27.26■■□□□ 1.95
PAK1-220ENST00000533568 LRRC9Q6ZRR7 1453 aa27.25■■□□□ 1.95
PAK1-220ENST00000533568 ZNF644Q9H582 1327 aaPredicted RBP27.24■■□□□ 1.95
PAK1-220ENST00000533568 RXRBP28702 533 aa27.24■■□□□ 1.95
PAK1-220ENST00000533568 PHLPP1O60346 1717 aa27.24■■□□□ 1.95
PAK1-220ENST00000533568 EHMT2Q96KQ7 1210 aa27.23■■□□□ 1.95
PAK1-220ENST00000533568 NCOA2Q15596 1464 aa27.22■■□□□ 1.95
PAK1-220ENST00000533568 CDK12Q9NYV4 1490 aaPredicted RBP27.22■■□□□ 1.95
PAK1-220ENST00000533568 ARHGAP23Q9P227 1491 aa27.22■■□□□ 1.95
PAK1-220ENST00000533568 TXNDC2Q86VQ3 553 aa27.21■■□□□ 1.95
PAK1-220ENST00000533568 UBR1Q8IWV7 1749 aa27.21■■□□□ 1.95
PAK1-220ENST00000533568 CCNB3Q8WWL7 1395 aa27.21■■□□□ 1.95
PAK1-220ENST00000533568 RBM33Q96EV2 1170 aaKnown RBP27.19■■□□□ 1.94
PAK1-220ENST00000533568 SLIT1O75093 1534 aa27.19■■□□□ 1.94
PAK1-220ENST00000533568 SPATA31A6Q5VVP1 1343 aa27.18■■□□□ 1.94
PAK1-220ENST00000533568 MEX3CQ5U5Q3 659 aaKnown RBP27.18■■□□□ 1.94
PAK1-220ENST00000533568 ERVK-7P63135 1459 aa27.18■■□□□ 1.94
PAK1-220ENST00000533568 COL16A1Q07092 1604 aaPredicted RBP27.17■■□□□ 1.94
PAK1-220ENST00000533568 SLAIN2Q9P270 581 aa27.15■■□□□ 1.94
PAK1-220ENST00000533568 KCNA6P17658 529 aa27.14■■□□□ 1.94
PAK1-220ENST00000533568 PROSER2Q86WR7 435 aaPredicted RBP27.14■■□□□ 1.94
PAK1-220ENST00000533568 FGD6Q6ZV73 1430 aa27.12■■□□□ 1.93
PAK1-220ENST00000533568 ABCC3O15438 1527 aa27.11■■□□□ 1.93
PAK1-220ENST00000533568 CHIC1Q5VXU3 224 aa27.1■■□□□ 1.93
PAK1-220ENST00000533568 PRDM15P57071 1507 aaPredicted RBP27.1■■□□□ 1.93
PAK1-220ENST00000533568 EID1Q9Y6B2 187 aa27.08■■□□□ 1.93
PAK1-220ENST00000533568 FYCO1Q9BQS8 1478 aa27.07■■□□□ 1.92
PAK1-220ENST00000533568 MSH6P52701 1360 aa27.06■■□□□ 1.92
PAK1-220ENST00000533568 TIAM1Q13009 1591 aa27.05■■□□□ 1.92
PAK1-220ENST00000533568 RGS12O14924 1447 aa27.05■■□□□ 1.92
PAK1-220ENST00000533568 SETBP1Q9Y6X0 1596 aa27.03■■□□□ 1.92
PAK1-220ENST00000533568 TMEM2Q9UHN6 1383 aa27.01■■□□□ 1.91
PAK1-220ENST00000533568 ZRANB1Q9UGI0 708 aa27.01■■□□□ 1.91
PAK1-220ENST00000533568 NKTRP30414 1462 aaKnown RBP27■■□□□ 1.91
PAK1-220ENST00000533568 CCDC141Q6ZP82 1450 aa27■■□□□ 1.91
PAK1-220ENST00000533568 SHPRHQ149N8 1683 aa27■■□□□ 1.91
PAK1-220ENST00000533568 SLC26A8Q96RN1 970 aa26.99■■□□□ 1.91
PAK1-220ENST00000533568 CFAP65Q6ZU64 1925 aaKnown RBP26.98■■□□□ 1.91
PAK1-220ENST00000533568 TET3O43151 1660 aa26.98■■□□□ 1.91
PAK1-220ENST00000533568 NWD1Q149M9 1564 aa26.97■■□□□ 1.91
PAK1-220ENST00000533568 AFF2P51816 1311 aa26.97■■□□□ 1.91
PAK1-220ENST00000533568 CAMSAP2Q08AD1 1489 aa26.96■■□□□ 1.91
PAK1-220ENST00000533568 NUTM2BA6NNL0 878 aaPredicted RBP26.94■■□□□ 1.9
PAK1-220ENST00000533568 NUTM2EB1AL46 878 aaPredicted RBP26.94■■□□□ 1.9
PAK1-220ENST00000533568 NUTM2DQ5VT03 806 aaPredicted RBP26.94■■□□□ 1.9
PAK1-220ENST00000533568 NUTM2AQ8IVF1 878 aaPredicted RBP26.94■■□□□ 1.9
PAK1-220ENST00000533568 AHDC1Q5TGY3 1603 aaPredicted RBP26.93■■□□□ 1.9
PAK1-220ENST00000533568 MTUS2Q5JR59 1369 aa26.92■■□□□ 1.9
PAK1-220ENST00000533568 RBM6P78332 1123 aaKnown RBP26.91■■□□□ 1.9
PAK1-220ENST00000533568 MROH1Q8NDA8 1641 aa26.9■■□□□ 1.9
PAK1-220ENST00000533568 FOXD1Q16676 465 aa26.9■■□□□ 1.9
PAK1-220ENST00000533568 RSPH4AQ5TD94 716 aa26.9■■□□□ 1.9
PAK1-220ENST00000533568 KDM5AP29375 1690 aaKnown RBP26.89■■□□□ 1.9
PAK1-220ENST00000533568 PIK3C2BO00750 1634 aa26.88■■□□□ 1.89
PAK1-220ENST00000533568 QTRT2Q9H974 415 aaKnown RBP26.88■■□□□ 1.89
PAK1-220ENST00000533568 DIP2AQ14689 1571 aa26.88■■□□□ 1.89
PAK1-220ENST00000533568 CEP152O94986 1710 aa26.87■■□□□ 1.89
PAK1-220ENST00000533568 ATAD2Q6PL18 1390 aa26.86■■□□□ 1.89
PAK1-220ENST00000533568 ARHGAP31Q2M1Z3 1444 aa26.83■■□□□ 1.89
PAK1-220ENST00000533568 EP400Q96L91 3159 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms