RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 KDM5DQ9BY66 1539 aa34.64■■■■□ 3.14
BEST1-207ENST00000533521 RNF17Q9BXT8 1623 aaKnown RBP34.63■■■■□ 3.13
BEST1-207ENST00000533521 DUOX2Q9NRD8 1548 aa34.62■■■■□ 3.13
BEST1-207ENST00000533521 DAPK1P53355 1430 aa34.6■■■■□ 3.13
BEST1-207ENST00000533521 DMRT2Q9Y5R5 561 aa34.58■■■■□ 3.13
BEST1-207ENST00000533521 STRCQ7RTU9 1775 aa34.57■■■■□ 3.12
BEST1-207ENST00000533521 WASHC2CQ9Y4E1 1318 aa34.55■■■■□ 3.12
BEST1-207ENST00000533521 ZNF142P52746 1687 aaPredicted RBP34.54■■■■□ 3.12
BEST1-207ENST00000533521 PZPP20742 1482 aa34.54■■■■□ 3.12
BEST1-207ENST00000533521 ZC3H13Q5T200 1668 aaKnown RBP34.54■■■■□ 3.12
BEST1-207ENST00000533521 KIF15Q9NS87 1388 aa34.53■■■■□ 3.12
BEST1-207ENST00000533521 MYO3AQ8NEV4 1616 aa34.52■■■■□ 3.12
BEST1-207ENST00000533521 ERBINQ96RT1 1412 aa34.52■■■■□ 3.12
BEST1-207ENST00000533521 MROH1Q8NDA8 1641 aa34.48■■■■□ 3.11
BEST1-207ENST00000533521 ANKRD30AQ9BXX3 1397 aa34.48■■■■□ 3.11
BEST1-207ENST00000533521 PTPRTO14522 1441 aa34.47■■■■□ 3.11
BEST1-207ENST00000533521 NCOA1Q15788 1441 aa34.47■■■■□ 3.11
BEST1-207ENST00000533521 CEP170BQ9Y4F5 1589 aaPredicted RBP34.46■■■■□ 3.11
BEST1-207ENST00000533521 ABCC3O15438 1527 aa34.45■■■■□ 3.11
BEST1-207ENST00000533521 ADGRL2O95490 1459 aa34.45■■■■□ 3.1
BEST1-207ENST00000533521 RRP7BPQ9NSQ0 103 aa34.43■■■■□ 3.1
BEST1-207ENST00000533521 PLA2R1Q13018 1463 aa34.42■■■■□ 3.1
BEST1-207ENST00000533521 CAMSAP1Q5T5Y3 1602 aa34.41■■■■□ 3.1
BEST1-207ENST00000533521 PRDM15P57071 1507 aaPredicted RBP34.41■■■■□ 3.1
BEST1-207ENST00000533521 A2ML1A8K2U0 1454 aa34.41■■■■□ 3.1
BEST1-207ENST00000533521 TNRQ92752 1358 aa34.41■■■■□ 3.1
BEST1-207ENST00000533521 ILDR1Q86SU0 546 aaPredicted RBP34.41■■■■□ 3.1
BEST1-207ENST00000533521 DEPDC5O75140 1603 aa34.39■■■■□ 3.1
BEST1-207ENST00000533521 FBXO31Q5XUX0 539 aaPredicted RBP34.37■■■■□ 3.09
BEST1-207ENST00000533521 FAM50AQ14320 339 aaKnown RBP34.36■■■■□ 3.09
BEST1-207ENST00000533521 NLRP1Q9C000 1473 aa34.34■■■■□ 3.09
BEST1-207ENST00000533521 PKD2Q13563 968 aa34.33■■■■□ 3.09
BEST1-207ENST00000533521 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.33■■■■□ 3.09
BEST1-207ENST00000533521 SPATA31D1Q6ZQQ2 1576 aa34.32■■■■□ 3.09
BEST1-207ENST00000533521 ARHGAP31Q2M1Z3 1444 aa34.32■■■■□ 3.08
BEST1-207ENST00000533521 FBXO41Q8TF61 875 aa34.32■■■■□ 3.08
BEST1-207ENST00000533521 CHIC2Q9UKJ5 165 aa34.32■■■■□ 3.08
BEST1-207ENST00000533521 CEP152O94986 1710 aa34.32■■■■□ 3.08
BEST1-207ENST00000533521 KANK1Q14678 1352 aa34.27■■■■□ 3.08
BEST1-207ENST00000533521 ERVK-7P63135 1459 aa34.27■■■■□ 3.08
BEST1-207ENST00000533521 VWDEQ8N2E2 1590 aa34.26■■■■□ 3.07
BEST1-207ENST00000533521 LMTK2Q8IWU2 1503 aa34.25■■■■□ 3.07
BEST1-207ENST00000533521 CERKQ8TCT0 537 aa34.24■■■■□ 3.07
BEST1-207ENST00000533521 ROCK1Q13464 1354 aa34.23■■■■□ 3.07
BEST1-207ENST00000533521 ANKRD50Q9ULJ7 1429 aa34.21■■■■□ 3.07
BEST1-207ENST00000533521 THEMISQ8N1K5 641 aaPredicted RBP34.21■■■■□ 3.07
BEST1-207ENST00000533521 NCKAP5LQ9HCH0 1330 aa34.2■■■■□ 3.07
BEST1-207ENST00000533521 UGGT1Q9NYU2 1555 aa34.19■■■■□ 3.06
BEST1-207ENST00000533521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.16■■■■□ 3.06
BEST1-207ENST00000533521 CFAP65Q6ZU64 1925 aaKnown RBP34.15■■■■□ 3.06
BEST1-207ENST00000533521 POLR1AO95602 1720 aaPredicted RBP34.15■■■■□ 3.06
BEST1-207ENST00000533521 LTBP4Q8N2S1 1624 aa34.12■■■■□ 3.05
BEST1-207ENST00000533521 ANKLE2Q86XL3 938 aa34.09■■■■□ 3.05
BEST1-207ENST00000533521 RRBP1Q9P2E9 1410 aaKnown RBP34.08■■■■□ 3.05
BEST1-207ENST00000533521 EFCAB6Q5THR3 1501 aa34.08■■■■□ 3.05
BEST1-207ENST00000533521 IQSEC2Q5JU85 1478 aa34.07■■■■□ 3.05
BEST1-207ENST00000533521 NEURL4Q96JN8 1562 aa34.07■■■■□ 3.05
BEST1-207ENST00000533521 MED14O60244 1454 aa34.07■■■■□ 3.04
BEST1-207ENST00000533521 PPARGC1BQ86YN6 1023 aaKnown RBP34.06■■■■□ 3.04
BEST1-207ENST00000533521 UBR1Q8IWV7 1749 aa34.05■■■■□ 3.04
BEST1-207ENST00000533521 RPRD2Q5VT52 1461 aaKnown RBP34.05■■■■□ 3.04
BEST1-207ENST00000533521 UNC13BO14795 1591 aa34.05■■■■□ 3.04
BEST1-207ENST00000533521 KDM5AP29375 1690 aaKnown RBP34.03■■■■□ 3.04
BEST1-207ENST00000533521 NOS1P29475 1434 aa34.01■■■■□ 3.03
BEST1-207ENST00000533521 TET3O43151 1660 aa34■■■■□ 3.03
BEST1-207ENST00000533521 SLIT1O75093 1534 aa33.96■■■■□ 3.03
BEST1-207ENST00000533521 GCC2Q8IWJ2 1684 aa33.96■■■■□ 3.03
BEST1-207ENST00000533521 ARHGAP23Q9P227 1491 aa33.95■■■■□ 3.03
BEST1-207ENST00000533521 ZNF335Q9H4Z2 1342 aaPredicted RBP33.95■■■■□ 3.03
BEST1-207ENST00000533521 NPHP4O75161 1426 aaPredicted RBP33.95■■■■□ 3.02
BEST1-207ENST00000533521 SLC52A1Q9NWF4 448 aa33.93■■■■□ 3.02
BEST1-207ENST00000533521 SYNMO15061 1565 aa33.93■■■■□ 3.02
BEST1-207ENST00000533521 PIK3C2BO00750 1634 aa33.93■■■■□ 3.02
BEST1-207ENST00000533521 IQGAP3Q86VI3 1631 aa33.92■■■■□ 3.02
BEST1-207ENST00000533521 ITGAEP38570 1179 aa33.91■■■■□ 3.02
BEST1-207ENST00000533521 IQGAP1P46940 1657 aa33.9■■■■□ 3.02
BEST1-207ENST00000533521 IDI1Q13907 227 aa33.9■■■■□ 3.02
BEST1-207ENST00000533521 SCAF11Q99590 1463 aaKnown RBP33.88■■■■□ 3.01
BEST1-207ENST00000533521 CPS1P31327 1500 aa33.86■■■■□ 3.01
BEST1-207ENST00000533521 TMEM2Q9UHN6 1383 aa33.85■■■■□ 3.01
BEST1-207ENST00000533521 EID1Q9Y6B2 187 aa33.82■■■■□ 3
BEST1-207ENST00000533521 NUP155O75694 1391 aa33.82■■■■□ 3
BEST1-207ENST00000533521 ADGRB3O60242 1522 aa33.81■■■■□ 3
BEST1-207ENST00000533521 STAG3Q9UJ98 1225 aa33.81■■■■□ 3
BEST1-207ENST00000533521 E9PCH4 1651 aa33.8■■■■□ 3
BEST1-207ENST00000533521 TXNDC2Q86VQ3 553 aa33.8■■■■□ 3
BEST1-207ENST00000533521 LTKP29376 864 aa33.79■■■■□ 3
BEST1-207ENST00000533521 NAIPQ13075 1403 aa33.77■■■■□ 3
BEST1-207ENST00000533521 HFM1A2PYH4 1435 aa33.71■■■□□ 2.99
BEST1-207ENST00000533521 TMEM131LA2VDJ0 1609 aa33.69■■■□□ 2.98
BEST1-207ENST00000533521 HDGFP51858 240 aaKnown RBP33.65■■■□□ 2.98
BEST1-207ENST00000533521 ZFYVE9O95405 1425 aa33.63■■■□□ 2.97
BEST1-207ENST00000533521 MYO5BQ9ULV0 1848 aa33.63■■■□□ 2.97
BEST1-207ENST00000533521 STRCP1A6NGW2 1772 aa33.63■■■□□ 2.97
BEST1-207ENST00000533521 UBAP1LF5GYI3 381 aa33.6■■■□□ 2.97
BEST1-207ENST00000533521 SPHKAPQ2M3C7 1700 aa33.59■■■□□ 2.97
BEST1-207ENST00000533521 LRRC7Q96NW7 1537 aa33.57■■■□□ 2.96
BEST1-207ENST00000533521 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.56■■■□□ 2.96
BEST1-207ENST00000533521 RIMS2Q9UQ26 1411 aa33.55■■■□□ 2.96
BEST1-207ENST00000533521 PLEKHG1Q9ULL1 1385 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms