RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 NCBP3Q53F19 620 aaKnown RBP10.52□□□□□ -0.73
SOX6-215ENST00000533411 MROH2AA6NES4 1674 aa10.51□□□□□ -0.73
SOX6-215ENST00000533411 ESF1Q9H501 851 aaKnown RBP10.51□□□□□ -0.73
SOX6-215ENST00000533411 FGD6Q6ZV73 1430 aa10.5□□□□□ -0.73
SOX6-215ENST00000533411 GGT6Q6P531 493 aa10.5□□□□□ -0.73
SOX6-215ENST00000533411 PTPN23Q9H3S7 1636 aa10.5□□□□□ -0.73
SOX6-215ENST00000533411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.5□□□□□ -0.73
SOX6-215ENST00000533411 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
SOX6-215ENST00000533411 CNTLNQ9NXG0 1405 aa10.5□□□□□ -0.73
SOX6-215ENST00000533411 CCER1Q8TC90 406 aaPredicted RBP10.49□□□□□ -0.73
SOX6-215ENST00000533411 DHX29Q7Z478 1369 aaKnown RBP10.49□□□□□ -0.73
SOX6-215ENST00000533411 SETD1BQ9UPS6 1966 aaKnown RBP10.48□□□□□ -0.73
SOX6-215ENST00000533411 MAST1Q9Y2H9 1570 aa10.48□□□□□ -0.73
SOX6-215ENST00000533411 CROCC2H7BZ55 1655 aa10.48□□□□□ -0.73
SOX6-215ENST00000533411 UHRF1BP1Q6BDS2 1440 aa10.48□□□□□ -0.73
SOX6-215ENST00000533411 RSPH4AQ5TD94 716 aa10.47□□□□□ -0.73
SOX6-215ENST00000533411 ZMYM3Q14202 1370 aa10.47□□□□□ -0.73
SOX6-215ENST00000533411 KIF3BO15066 747 aa10.46□□□□□ -0.73
SOX6-215ENST00000533411 TSPY4P0CV99 314 aa10.46□□□□□ -0.73
SOX6-215ENST00000533411 TSPY10P0CW01 314 aa10.46□□□□□ -0.73
SOX6-215ENST00000533411 STRCQ7RTU9 1775 aa10.46□□□□□ -0.74
SOX6-215ENST00000533411 DNMT1P26358 1616 aaKnown RBP10.45□□□□□ -0.74
SOX6-215ENST00000533411 TCOF1Q13428 1488 aaKnown RBP10.45□□□□□ -0.74
SOX6-215ENST00000533411 MYO3AQ8NEV4 1616 aa10.44□□□□□ -0.74
SOX6-215ENST00000533411 ABCC5O15440 1437 aa10.44□□□□□ -0.74
SOX6-215ENST00000533411 RNF17Q9BXT8 1623 aaKnown RBP10.44□□□□□ -0.74
SOX6-215ENST00000533411 KDM5DQ9BY66 1539 aa10.43□□□□□ -0.74
SOX6-215ENST00000533411 DAPK1P53355 1430 aa10.43□□□□□ -0.74
SOX6-215ENST00000533411 NPATQ14207 1427 aa10.43□□□□□ -0.74
SOX6-215ENST00000533411 PTPRKQ15262 1439 aa10.43□□□□□ -0.74
SOX6-215ENST00000533411 FAM50AQ14320 339 aaKnown RBP10.43□□□□□ -0.74
SOX6-215ENST00000533411 ILDR1Q86SU0 546 aaPredicted RBP10.43□□□□□ -0.74
SOX6-215ENST00000533411 GCC2Q8IWJ2 1684 aa10.43□□□□□ -0.74
SOX6-215ENST00000533411 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
SOX6-215ENST00000533411 ZNF142P52746 1687 aaPredicted RBP10.42□□□□□ -0.74
SOX6-215ENST00000533411 MROH1Q8NDA8 1641 aa10.42□□□□□ -0.74
SOX6-215ENST00000533411 EIF2AK4Q9P2K8 1649 aaKnown RBP10.42□□□□□ -0.74
SOX6-215ENST00000533411 CEP152O94986 1710 aa10.41□□□□□ -0.74
SOX6-215ENST00000533411 KIF15Q9NS87 1388 aa10.4□□□□□ -0.74
SOX6-215ENST00000533411 CEP170BQ9Y4F5 1589 aaPredicted RBP10.4□□□□□ -0.74
SOX6-215ENST00000533411 DUOX2Q9NRD8 1548 aa10.4□□□□□ -0.74
SOX6-215ENST00000533411 FAM135AQ9P2D6 1515 aa10.4□□□□□ -0.74
SOX6-215ENST00000533411 FBXO31Q5XUX0 539 aaPredicted RBP10.4□□□□□ -0.74
SOX6-215ENST00000533411 CHIC2Q9UKJ5 165 aa10.4□□□□□ -0.74
SOX6-215ENST00000533411 CAMSAP1Q5T5Y3 1602 aa10.4□□□□□ -0.75
SOX6-215ENST00000533411 WASHC2CQ9Y4E1 1318 aa10.39□□□□□ -0.75
SOX6-215ENST00000533411 ABCC3O15438 1527 aa10.39□□□□□ -0.75
SOX6-215ENST00000533411 PZPP20742 1482 aa10.39□□□□□ -0.75
SOX6-215ENST00000533411 ITGAEP38570 1179 aa10.39□□□□□ -0.75
SOX6-215ENST00000533411 RRP7BPQ9NSQ0 103 aa10.39□□□□□ -0.75
SOX6-215ENST00000533411 ZC3H13Q5T200 1668 aaKnown RBP10.38□□□□□ -0.75
SOX6-215ENST00000533411 NCOA1Q15788 1441 aa10.38□□□□□ -0.75
SOX6-215ENST00000533411 SETD5Q9C0A6 1442 aa10.38□□□□□ -0.75
SOX6-215ENST00000533411 CFAP65Q6ZU64 1925 aaKnown RBP10.38□□□□□ -0.75
SOX6-215ENST00000533411 TNRQ92752 1358 aa10.37□□□□□ -0.75
SOX6-215ENST00000533411 RAB3GAP2Q9H2M9 1393 aa10.37□□□□□ -0.75
SOX6-215ENST00000533411 A2ML1A8K2U0 1454 aa10.36□□□□□ -0.75
SOX6-215ENST00000533411 CLSPNQ9HAW4 1339 aa10.36□□□□□ -0.75
SOX6-215ENST00000533411 HFM1A2PYH4 1435 aa10.36□□□□□ -0.75
SOX6-215ENST00000533411 ERBINQ96RT1 1412 aa10.36□□□□□ -0.75
SOX6-215ENST00000533411 PRDM15P57071 1507 aaPredicted RBP10.36□□□□□ -0.75
SOX6-215ENST00000533411 DHX57Q6P158 1386 aaKnown RBP10.36□□□□□ -0.75
SOX6-215ENST00000533411 DEPDC5O75140 1603 aa10.36□□□□□ -0.75
SOX6-215ENST00000533411 NCKAP5LQ9HCH0 1330 aa10.35□□□□□ -0.75
SOX6-215ENST00000533411 NPM3O75607 178 aaKnown RBP10.35□□□□□ -0.75
SOX6-215ENST00000533411 ANKRD30AQ9BXX3 1397 aa10.35□□□□□ -0.75
SOX6-215ENST00000533411 ADGRL2O95490 1459 aa10.35□□□□□ -0.75
SOX6-215ENST00000533411 PTPRTO14522 1441 aa10.34□□□□□ -0.75
SOX6-215ENST00000533411 SPATA31D1Q6ZQQ2 1576 aa10.34□□□□□ -0.75
SOX6-215ENST00000533411 ERVK-7P63135 1459 aa10.33□□□□□ -0.76
SOX6-215ENST00000533411 PLA2R1Q13018 1463 aa10.33□□□□□ -0.76
SOX6-215ENST00000533411 CERKQ8TCT0 537 aa10.32□□□□□ -0.76
SOX6-215ENST00000533411 FBXO41Q8TF61 875 aa10.32□□□□□ -0.76
SOX6-215ENST00000533411 POLR1AO95602 1720 aaPredicted RBP10.32□□□□□ -0.76
SOX6-215ENST00000533411 VWDEQ8N2E2 1590 aa10.31□□□□□ -0.76
SOX6-215ENST00000533411 NEURL4Q96JN8 1562 aa10.31□□□□□ -0.76
SOX6-215ENST00000533411 UGGT1Q9NYU2 1555 aa10.31□□□□□ -0.76
SOX6-215ENST00000533411 NLRP1Q9C000 1473 aa10.3□□□□□ -0.76
SOX6-215ENST00000533411 NAIPQ13075 1403 aa10.3□□□□□ -0.76
SOX6-215ENST00000533411 LTBP4Q8N2S1 1624 aa10.29□□□□□ -0.76
SOX6-215ENST00000533411 PKD2Q13563 968 aa10.29□□□□□ -0.76
SOX6-215ENST00000533411 UBR1Q8IWV7 1749 aa10.29□□□□□ -0.76
SOX6-215ENST00000533411 ROCK1Q13464 1354 aa10.28□□□□□ -0.76
SOX6-215ENST00000533411 KANK1Q14678 1352 aa10.28□□□□□ -0.76
SOX6-215ENST00000533411 ARHGAP31Q2M1Z3 1444 aa10.28□□□□□ -0.76
SOX6-215ENST00000533411 ANKRD50Q9ULJ7 1429 aa10.28□□□□□ -0.76
SOX6-215ENST00000533411 CAPN15O75808 1086 aa10.28□□□□□ -0.76
SOX6-215ENST00000533411 ZNF335Q9H4Z2 1342 aaPredicted RBP10.28□□□□□ -0.76
SOX6-215ENST00000533411 LMTK2Q8IWU2 1503 aa10.28□□□□□ -0.76
SOX6-215ENST00000533411 EFCAB6Q5THR3 1501 aa10.27□□□□□ -0.77
SOX6-215ENST00000533411 UNC13BO14795 1591 aa10.26□□□□□ -0.77
SOX6-215ENST00000533411 SYNMO15061 1565 aa10.26□□□□□ -0.77
SOX6-215ENST00000533411 PIK3C2BO00750 1634 aa10.26□□□□□ -0.77
SOX6-215ENST00000533411 THEMISQ8N1K5 641 aaPredicted RBP10.25□□□□□ -0.77
SOX6-215ENST00000533411 TET3O43151 1660 aa10.25□□□□□ -0.77
SOX6-215ENST00000533411 ACIN1Q9UKV3 1341 aaKnown RBP10.24□□□□□ -0.77
SOX6-215ENST00000533411 IQGAP1P46940 1657 aa10.24□□□□□ -0.77
SOX6-215ENST00000533411 NPHP4O75161 1426 aaPredicted RBP10.24□□□□□ -0.77
SOX6-215ENST00000533411 ANKLE2Q86XL3 938 aa10.23□□□□□ -0.77
SOX6-215ENST00000533411 E9PCH4 1651 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms