RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 ESF1Q9H501 851 aaKnown RBP31.41■■■□□ 2.62
PTP4A2-215ENST00000533408 BCORL1Q5H9F3 1711 aa31.4■■■□□ 2.62
PTP4A2-215ENST00000533408 RAB3GAP2Q9H2M9 1393 aa31.35■■■□□ 2.61
PTP4A2-215ENST00000533408 MLECQ14165 292 aa31.35■■■□□ 2.61
PTP4A2-215ENST00000533408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.34■■■□□ 2.61
PTP4A2-215ENST00000533408 TRIM52Q96A61 297 aa31.33■■■□□ 2.61
PTP4A2-215ENST00000533408 WASHC2CQ9Y4E1 1318 aa31.32■■■□□ 2.6
PTP4A2-215ENST00000533408 FAM135AQ9P2D6 1515 aa31.32■■■□□ 2.6
PTP4A2-215ENST00000533408 RNF17Q9BXT8 1623 aaKnown RBP31.31■■■□□ 2.6
PTP4A2-215ENST00000533408 NUP155O75694 1391 aa31.29■■■□□ 2.6
PTP4A2-215ENST00000533408 CNTLNQ9NXG0 1405 aa31.27■■■□□ 2.6
PTP4A2-215ENST00000533408 DEPDC5O75140 1603 aa31.26■■■□□ 2.59
PTP4A2-215ENST00000533408 PRDM15P57071 1507 aaPredicted RBP31.25■■■□□ 2.59
PTP4A2-215ENST00000533408 SIGLEC1Q9BZZ2 1709 aa31.24■■■□□ 2.59
PTP4A2-215ENST00000533408 UNC13BO14795 1591 aa31.24■■■□□ 2.59
PTP4A2-215ENST00000533408 KDM5DQ9BY66 1539 aa31.21■■■□□ 2.59
PTP4A2-215ENST00000533408 ZC3H13Q5T200 1668 aaKnown RBP31.17■■■□□ 2.58
PTP4A2-215ENST00000533408 SLC4A1APQ9BWU0 796 aaKnown RBP31.17■■■□□ 2.58
PTP4A2-215ENST00000533408 MROH1Q8NDA8 1641 aa31.16■■■□□ 2.58
PTP4A2-215ENST00000533408 LMTK2Q8IWU2 1503 aa31.15■■■□□ 2.58
PTP4A2-215ENST00000533408 VWDEQ8N2E2 1590 aa31.15■■■□□ 2.58
PTP4A2-215ENST00000533408 ABCC3O15438 1527 aa31.13■■■□□ 2.57
PTP4A2-215ENST00000533408 IQGAP3Q86VI3 1631 aa31.13■■■□□ 2.57
PTP4A2-215ENST00000533408 ADAMTSL3P82987 1691 aa31.13■■■□□ 2.57
PTP4A2-215ENST00000533408 MPHOSPH9Q99550 1183 aa31.12■■■□□ 2.57
PTP4A2-215ENST00000533408 ZMYM3Q14202 1370 aa31.1■■■□□ 2.57
PTP4A2-215ENST00000533408 ARHGAP31Q2M1Z3 1444 aa31.08■■■□□ 2.57
PTP4A2-215ENST00000533408 FER1L4A9Z1Z3 1794 aa31.07■■■□□ 2.56
PTP4A2-215ENST00000533408 RPRD2Q5VT52 1461 aaKnown RBP31.06■■■□□ 2.56
PTP4A2-215ENST00000533408 MROH2AA6NES4 1674 aa31.06■■■□□ 2.56
PTP4A2-215ENST00000533408 TET3O43151 1660 aa31.04■■■□□ 2.56
PTP4A2-215ENST00000533408 CLTCQ00610 1675 aaKnown RBP31.04■■■□□ 2.56
PTP4A2-215ENST00000533408 PZPP20742 1482 aa31.04■■■□□ 2.56
PTP4A2-215ENST00000533408 PKD2Q13563 968 aa31.04■■■□□ 2.56
PTP4A2-215ENST00000533408 MADDQ8WXG6 1647 aa31.04■■■□□ 2.56
PTP4A2-215ENST00000533408 KDM4FA0A1W2PPD8 638 aa31.01■■■□□ 2.55
PTP4A2-215ENST00000533408 EFCAB6Q5THR3 1501 aa31■■■□□ 2.55
PTP4A2-215ENST00000533408 CAMSAP1Q5T5Y3 1602 aa31■■■□□ 2.55
PTP4A2-215ENST00000533408 CEP152O94986 1710 aa31■■■□□ 2.55
PTP4A2-215ENST00000533408 RIMS1Q86UR5 1692 aaKnown RBP30.97■■■□□ 2.55
PTP4A2-215ENST00000533408 PTPRMP28827 1452 aa30.96■■■□□ 2.55
PTP4A2-215ENST00000533408 NPATQ14207 1427 aa30.96■■■□□ 2.55
PTP4A2-215ENST00000533408 CEBPAP49715 358 aaPredicted RBP30.91■■■□□ 2.54
PTP4A2-215ENST00000533408 SLC52A1Q9NWF4 448 aa30.89■■■□□ 2.54
PTP4A2-215ENST00000533408 PLPPR3Q6T4P5 718 aa30.88■■■□□ 2.53
PTP4A2-215ENST00000533408 FBXO31Q5XUX0 539 aaPredicted RBP30.87■■■□□ 2.53
PTP4A2-215ENST00000533408 DHX57Q6P158 1386 aaKnown RBP30.87■■■□□ 2.53
PTP4A2-215ENST00000533408 E9PCH4 1651 aa30.87■■■□□ 2.53
PTP4A2-215ENST00000533408 C3P01024 1663 aa30.87■■■□□ 2.53
PTP4A2-215ENST00000533408 ERVK-7P63135 1459 aa30.86■■■□□ 2.53
PTP4A2-215ENST00000533408 NOS1P29475 1434 aa30.85■■■□□ 2.53
PTP4A2-215ENST00000533408 TNRQ92752 1358 aa30.85■■■□□ 2.53
PTP4A2-215ENST00000533408 PTPRTO14522 1441 aa30.84■■■□□ 2.53
PTP4A2-215ENST00000533408 SPATA31D1Q6ZQQ2 1576 aa30.83■■■□□ 2.53
PTP4A2-215ENST00000533408 CLSPNQ9HAW4 1339 aa30.81■■■□□ 2.52
PTP4A2-215ENST00000533408 FOXD1Q16676 465 aa30.81■■■□□ 2.52
PTP4A2-215ENST00000533408 PREX1Q8TCU6 1659 aa30.79■■■□□ 2.52
PTP4A2-215ENST00000533408 CCER1Q8TC90 406 aaPredicted RBP30.79■■■□□ 2.52
PTP4A2-215ENST00000533408 ANKRD30BQ9BXX2 1392 aa30.78■■■□□ 2.52
PTP4A2-215ENST00000533408 NLRP1Q9C000 1473 aa30.76■■■□□ 2.52
PTP4A2-215ENST00000533408 CCDC144AA2RUR9 1427 aa30.76■■■□□ 2.51
PTP4A2-215ENST00000533408 TRPM2O94759 1503 aa30.75■■■□□ 2.51
PTP4A2-215ENST00000533408 SPHKAPQ2M3C7 1700 aa30.74■■■□□ 2.51
PTP4A2-215ENST00000533408 SETD1BQ9UPS6 1966 aaKnown RBP30.74■■■□□ 2.51
PTP4A2-215ENST00000533408 STAG3Q9UJ98 1225 aa30.73■■■□□ 2.51
PTP4A2-215ENST00000533408 IDI1Q13907 227 aa30.71■■■□□ 2.51
PTP4A2-215ENST00000533408 PLA2R1Q13018 1463 aa30.7■■■□□ 2.51
PTP4A2-215ENST00000533408 UHRF1BP1Q6BDS2 1440 aa30.7■■■□□ 2.5
PTP4A2-215ENST00000533408 CFAP65Q6ZU64 1925 aaKnown RBP30.69■■■□□ 2.5
PTP4A2-215ENST00000533408 SYNMO15061 1565 aa30.67■■■□□ 2.5
PTP4A2-215ENST00000533408 AEBP2Q6ZN18 517 aaPredicted RBP30.66■■■□□ 2.5
PTP4A2-215ENST00000533408 THEMISQ8N1K5 641 aaPredicted RBP30.65■■■□□ 2.5
PTP4A2-215ENST00000533408 A2ML1A8K2U0 1454 aa30.63■■■□□ 2.49
PTP4A2-215ENST00000533408 CHGAP10645 457 aaKnown RBP30.63■■■□□ 2.49
PTP4A2-215ENST00000533408 HDGFP51858 240 aaKnown RBP30.63■■■□□ 2.49
PTP4A2-215ENST00000533408 PIK3C2BO00750 1634 aa30.62■■■□□ 2.49
PTP4A2-215ENST00000533408 MYO3AQ8NEV4 1616 aa30.58■■■□□ 2.49
PTP4A2-215ENST00000533408 CLTCL1P53675 1640 aa30.57■■■□□ 2.48
PTP4A2-215ENST00000533408 UGGT1Q9NYU2 1555 aa30.57■■■□□ 2.48
PTP4A2-215ENST00000533408 KDM5AP29375 1690 aaKnown RBP30.56■■■□□ 2.48
PTP4A2-215ENST00000533408 RPGRIP1LQ68CZ1 1315 aa30.55■■■□□ 2.48
PTP4A2-215ENST00000533408 CEP170BQ9Y4F5 1589 aaPredicted RBP30.55■■■□□ 2.48
PTP4A2-215ENST00000533408 NEUROD1Q13562 356 aa30.55■■■□□ 2.48
PTP4A2-215ENST00000533408 ZNF326Q5BKZ1 582 aaKnown RBP30.55■■■□□ 2.48
PTP4A2-215ENST00000533408 STAC3Q96MF2 364 aa30.55■■■□□ 2.48
PTP4A2-215ENST00000533408 NEURL4Q96JN8 1562 aa30.54■■■□□ 2.48
PTP4A2-215ENST00000533408 ADGRB3O60242 1522 aa30.53■■■□□ 2.48
PTP4A2-215ENST00000533408 TIMELESSQ9UNS1 1208 aa30.53■■■□□ 2.48
PTP4A2-215ENST00000533408 SIN3AQ96ST3 1273 aa30.52■■■□□ 2.48
PTP4A2-215ENST00000533408 KIF1BO60333 1816 aa30.52■■■□□ 2.48
PTP4A2-215ENST00000533408 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.51■■■□□ 2.47
PTP4A2-215ENST00000533408 ZNF142P52746 1687 aaPredicted RBP30.51■■■□□ 2.47
PTP4A2-215ENST00000533408 EID1Q9Y6B2 187 aa30.5■■■□□ 2.47
PTP4A2-215ENST00000533408 RGL3Q3MIN7 710 aa30.49■■■□□ 2.47
PTP4A2-215ENST00000533408 SPATA31E1Q6ZUB1 1445 aa30.47■■■□□ 2.47
PTP4A2-215ENST00000533408 TMEM131LA2VDJ0 1609 aa30.47■■■□□ 2.47
PTP4A2-215ENST00000533408 TMEM2Q9UHN6 1383 aa30.45■■■□□ 2.47
PTP4A2-215ENST00000533408 VGFO15240 615 aaPredicted RBP30.45■■■□□ 2.47
PTP4A2-215ENST00000533408 UBR1Q8IWV7 1749 aa30.44■■■□□ 2.46
PTP4A2-215ENST00000533408 TONSLQ96HA7 1378 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms