RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 RAB3GAP2Q9H2M9 1393 aa16.84■□□□□ 0.29
GMDS-210ENST00000533279 HRCP23327 699 aa16.83■□□□□ 0.28
GMDS-210ENST00000533279 AGLP35573 1532 aa16.83■□□□□ 0.28
GMDS-210ENST00000533279 TRIM52Q96A61 297 aa16.83■□□□□ 0.28
GMDS-210ENST00000533279 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.28
GMDS-210ENST00000533279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.8■□□□□ 0.28
GMDS-210ENST00000533279 GGT6Q6P531 493 aa16.79■□□□□ 0.28
GMDS-210ENST00000533279 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
GMDS-210ENST00000533279 BCORL1Q5H9F3 1711 aa16.78■□□□□ 0.28
GMDS-210ENST00000533279 RNF17Q9BXT8 1623 aaKnown RBP16.77■□□□□ 0.27
GMDS-210ENST00000533279 NUP155O75694 1391 aa16.77■□□□□ 0.27
GMDS-210ENST00000533279 FAM135AQ9P2D6 1515 aa16.76■□□□□ 0.27
GMDS-210ENST00000533279 MLECQ14165 292 aa16.76■□□□□ 0.27
GMDS-210ENST00000533279 UNC13BO14795 1591 aa16.76■□□□□ 0.27
GMDS-210ENST00000533279 PRDM15P57071 1507 aaPredicted RBP16.75■□□□□ 0.27
GMDS-210ENST00000533279 DEPDC5O75140 1603 aa16.74■□□□□ 0.27
GMDS-210ENST00000533279 WASHC2CQ9Y4E1 1318 aa16.74■□□□□ 0.27
GMDS-210ENST00000533279 KDM5DQ9BY66 1539 aa16.73■□□□□ 0.27
GMDS-210ENST00000533279 ZC3H13Q5T200 1668 aaKnown RBP16.72■□□□□ 0.27
GMDS-210ENST00000533279 CNTLNQ9NXG0 1405 aa16.71■□□□□ 0.27
GMDS-210ENST00000533279 SLC4A1APQ9BWU0 796 aaKnown RBP16.71■□□□□ 0.27
GMDS-210ENST00000533279 IQGAP3Q86VI3 1631 aa16.7■□□□□ 0.26
GMDS-210ENST00000533279 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
GMDS-210ENST00000533279 TET3O43151 1660 aa16.65■□□□□ 0.26
GMDS-210ENST00000533279 ABCC3O15438 1527 aa16.65■□□□□ 0.26
GMDS-210ENST00000533279 LMTK2Q8IWU2 1503 aa16.65■□□□□ 0.26
GMDS-210ENST00000533279 SIGLEC1Q9BZZ2 1709 aa16.65■□□□□ 0.26
GMDS-210ENST00000533279 MPHOSPH9Q99550 1183 aa16.65■□□□□ 0.26
GMDS-210ENST00000533279 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
GMDS-210ENST00000533279 FER1L4A9Z1Z3 1794 aa16.64■□□□□ 0.25
GMDS-210ENST00000533279 PLPPR3Q6T4P5 718 aa16.64■□□□□ 0.25
GMDS-210ENST00000533279 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.25
GMDS-210ENST00000533279 CEP152O94986 1710 aa16.64■□□□□ 0.25
GMDS-210ENST00000533279 CLTCQ00610 1675 aaKnown RBP16.62■□□□□ 0.25
GMDS-210ENST00000533279 PZPP20742 1482 aa16.62■□□□□ 0.25
GMDS-210ENST00000533279 RPRD2Q5VT52 1461 aaKnown RBP16.62■□□□□ 0.25
GMDS-210ENST00000533279 EFCAB6Q5THR3 1501 aa16.62■□□□□ 0.25
GMDS-210ENST00000533279 PKD2Q13563 968 aa16.62■□□□□ 0.25
GMDS-210ENST00000533279 CAMSAP1Q5T5Y3 1602 aa16.62■□□□□ 0.25
GMDS-210ENST00000533279 MROH2AA6NES4 1674 aa16.61■□□□□ 0.25
GMDS-210ENST00000533279 ARHGAP31Q2M1Z3 1444 aa16.6■□□□□ 0.25
GMDS-210ENST00000533279 DHX57Q6P158 1386 aaKnown RBP16.59■□□□□ 0.25
GMDS-210ENST00000533279 MADDQ8WXG6 1647 aa16.59■□□□□ 0.25
GMDS-210ENST00000533279 ADAMTSL3P82987 1691 aa16.58■□□□□ 0.24
GMDS-210ENST00000533279 ZMYM3Q14202 1370 aa16.57■□□□□ 0.24
GMDS-210ENST00000533279 RIMS1Q86UR5 1692 aaKnown RBP16.56■□□□□ 0.24
GMDS-210ENST00000533279 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
GMDS-210ENST00000533279 NPATQ14207 1427 aa16.54■□□□□ 0.24
GMDS-210ENST00000533279 E9PCH4 1651 aa16.54■□□□□ 0.24
GMDS-210ENST00000533279 CCDC144AA2RUR9 1427 aa16.53■□□□□ 0.24
GMDS-210ENST00000533279 SPHKAPQ2M3C7 1700 aa16.51■□□□□ 0.23
GMDS-210ENST00000533279 ERVK-7P63135 1459 aa16.51■□□□□ 0.23
GMDS-210ENST00000533279 TRPM2O94759 1503 aa16.5■□□□□ 0.23
GMDS-210ENST00000533279 TNRQ92752 1358 aa16.5■□□□□ 0.23
GMDS-210ENST00000533279 C3P01024 1663 aa16.5■□□□□ 0.23
GMDS-210ENST00000533279 PREX1Q8TCU6 1659 aa16.5■□□□□ 0.23
GMDS-210ENST00000533279 SLC52A1Q9NWF4 448 aa16.49■□□□□ 0.23
GMDS-210ENST00000533279 PTPRMP28827 1452 aa16.48■□□□□ 0.23
GMDS-210ENST00000533279 SPATA31D1Q6ZQQ2 1576 aa16.48■□□□□ 0.23
GMDS-210ENST00000533279 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
GMDS-210ENST00000533279 PTPRTO14522 1441 aa16.47■□□□□ 0.23
GMDS-210ENST00000533279 NOS1P29475 1434 aa16.47■□□□□ 0.23
GMDS-210ENST00000533279 ANKRD30BQ9BXX2 1392 aa16.47■□□□□ 0.23
GMDS-210ENST00000533279 CEBPAP49715 358 aaPredicted RBP16.45■□□□□ 0.22
GMDS-210ENST00000533279 FBXO31Q5XUX0 539 aaPredicted RBP16.45■□□□□ 0.22
GMDS-210ENST00000533279 CFAP65Q6ZU64 1925 aaKnown RBP16.45■□□□□ 0.22
GMDS-210ENST00000533279 NLRP1Q9C000 1473 aa16.44■□□□□ 0.22
GMDS-210ENST00000533279 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
GMDS-210ENST00000533279 NEUROD1Q13562 356 aa16.43■□□□□ 0.22
GMDS-210ENST00000533279 TONSLQ96HA7 1378 aa16.42■□□□□ 0.22
GMDS-210ENST00000533279 UHRF1BP1Q6BDS2 1440 aa16.42■□□□□ 0.22
GMDS-210ENST00000533279 SYNMO15061 1565 aa16.42■□□□□ 0.22
GMDS-210ENST00000533279 KDM4FA0A1W2PPD8 638 aa16.41■□□□□ 0.22
GMDS-210ENST00000533279 PLA2R1Q13018 1463 aa16.4■□□□□ 0.22
GMDS-210ENST00000533279 KIF1BO60333 1816 aa16.4■□□□□ 0.22
GMDS-210ENST00000533279 CLTCL1P53675 1640 aa16.39■□□□□ 0.21
GMDS-210ENST00000533279 ZNF326Q5BKZ1 582 aaKnown RBP16.39■□□□□ 0.21
GMDS-210ENST00000533279 SETD1BQ9UPS6 1966 aaKnown RBP16.38■□□□□ 0.21
GMDS-210ENST00000533279 MYO3AQ8NEV4 1616 aa16.38■□□□□ 0.21
GMDS-210ENST00000533279 PIK3C2BO00750 1634 aa16.37■□□□□ 0.21
GMDS-210ENST00000533279 ADGRB3O60242 1522 aa16.37■□□□□ 0.21
GMDS-210ENST00000533279 ZEB1P37275 1124 aaPredicted RBP16.37■□□□□ 0.21
GMDS-210ENST00000533279 HDGFP51858 240 aaKnown RBP16.37■□□□□ 0.21
GMDS-210ENST00000533279 IDI1Q13907 227 aa16.37■□□□□ 0.21
GMDS-210ENST00000533279 A2ML1A8K2U0 1454 aa16.36■□□□□ 0.21
GMDS-210ENST00000533279 UGGT1Q9NYU2 1555 aa16.36■□□□□ 0.21
GMDS-210ENST00000533279 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
GMDS-210ENST00000533279 TIMELESSQ9UNS1 1208 aa16.36■□□□□ 0.21
GMDS-210ENST00000533279 NEURL4Q96JN8 1562 aa16.34■□□□□ 0.21
GMDS-210ENST00000533279 CEP170BQ9Y4F5 1589 aaPredicted RBP16.34■□□□□ 0.21
GMDS-210ENST00000533279 RGL3Q3MIN7 710 aa16.34■□□□□ 0.21
GMDS-210ENST00000533279 THEMISQ8N1K5 641 aaPredicted RBP16.34■□□□□ 0.21
GMDS-210ENST00000533279 KDM5AP29375 1690 aaKnown RBP16.34■□□□□ 0.21
GMDS-210ENST00000533279 RPGRIP1LQ68CZ1 1315 aa16.33■□□□□ 0.2
GMDS-210ENST00000533279 ZNF142P52746 1687 aaPredicted RBP16.33■□□□□ 0.2
GMDS-210ENST00000533279 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.32■□□□□ 0.2
GMDS-210ENST00000533279 STAC3Q96MF2 364 aa16.32■□□□□ 0.2
GMDS-210ENST00000533279 PPP1R15AO75807 674 aaPredicted RBP16.31■□□□□ 0.2
GMDS-210ENST00000533279 EID1Q9Y6B2 187 aa16.31■□□□□ 0.2
GMDS-210ENST00000533279 TMEM131LA2VDJ0 1609 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms