RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 EIF2AK4Q9P2K8 1649 aaKnown RBP36.6■■■■□ 3.45
SMPD1-209ENST00000533196 SHANK2Q9UPX8 1470 aa36.59■■■■□ 3.45
SMPD1-209ENST00000533196 PTPRTO14522 1441 aa36.58■■■■□ 3.45
SMPD1-209ENST00000533196 FGD6Q6ZV73 1430 aa36.58■■■■□ 3.45
SMPD1-209ENST00000533196 TCOF1Q13428 1488 aaKnown RBP36.57■■■■□ 3.45
SMPD1-209ENST00000533196 RNF17Q9BXT8 1623 aaKnown RBP36.57■■■■□ 3.44
SMPD1-209ENST00000533196 NCOA1Q15788 1441 aa36.57■■■■□ 3.44
SMPD1-209ENST00000533196 CROCC2H7BZ55 1655 aa36.57■■■■□ 3.44
SMPD1-209ENST00000533196 WASHC2CQ9Y4E1 1318 aa36.57■■■■□ 3.44
SMPD1-209ENST00000533196 PZPP20742 1482 aa36.54■■■■□ 3.44
SMPD1-209ENST00000533196 DUOX2Q9NRD8 1548 aa36.54■■■■□ 3.44
SMPD1-209ENST00000533196 CEP170BQ9Y4F5 1589 aaPredicted RBP36.53■■■■□ 3.44
SMPD1-209ENST00000533196 ABCC5O15440 1437 aa36.53■■■■□ 3.44
SMPD1-209ENST00000533196 CAMSAP1Q5T5Y3 1602 aa36.52■■■■□ 3.44
SMPD1-209ENST00000533196 DNMT1P26358 1616 aaKnown RBP36.52■■■■□ 3.44
SMPD1-209ENST00000533196 ZC3H13Q5T200 1668 aaKnown RBP36.49■■■■□ 3.43
SMPD1-209ENST00000533196 DAPK1P53355 1430 aa36.49■■■■□ 3.43
SMPD1-209ENST00000533196 PLA2R1Q13018 1463 aa36.48■■■■□ 3.43
SMPD1-209ENST00000533196 CERKQ8TCT0 537 aa36.46■■■■□ 3.43
SMPD1-209ENST00000533196 A2ML1A8K2U0 1454 aa36.45■■■■□ 3.43
SMPD1-209ENST00000533196 KIF15Q9NS87 1388 aa36.44■■■■□ 3.42
SMPD1-209ENST00000533196 TNRQ92752 1358 aa36.43■■■■□ 3.42
SMPD1-209ENST00000533196 ERBINQ96RT1 1412 aa36.42■■■■□ 3.42
SMPD1-209ENST00000533196 ABCC3O15438 1527 aa36.42■■■■□ 3.42
SMPD1-209ENST00000533196 PKD2Q13563 968 aa36.41■■■■□ 3.42
SMPD1-209ENST00000533196 MROH1Q8NDA8 1641 aa36.41■■■■□ 3.42
SMPD1-209ENST00000533196 FBXO31Q5XUX0 539 aaPredicted RBP36.4■■■■□ 3.42
SMPD1-209ENST00000533196 RRP7BPQ9NSQ0 103 aa36.35■■■■□ 3.41
SMPD1-209ENST00000533196 ANKRD30AQ9BXX3 1397 aa36.35■■■■□ 3.41
SMPD1-209ENST00000533196 NLRP1Q9C000 1473 aa36.34■■■■□ 3.41
SMPD1-209ENST00000533196 PRDM15P57071 1507 aaPredicted RBP36.33■■■■□ 3.41
SMPD1-209ENST00000533196 NCKAP5LQ9HCH0 1330 aa36.32■■■■□ 3.4
SMPD1-209ENST00000533196 CEP152O94986 1710 aa36.31■■■■□ 3.4
SMPD1-209ENST00000533196 SPATA31D1Q6ZQQ2 1576 aa36.3■■■■□ 3.4
SMPD1-209ENST00000533196 DEPDC5O75140 1603 aa36.28■■■■□ 3.4
SMPD1-209ENST00000533196 ADGRL2O95490 1459 aa36.27■■■■□ 3.4
SMPD1-209ENST00000533196 CHIC2Q9UKJ5 165 aa36.25■■■■□ 3.39
SMPD1-209ENST00000533196 LTBP4Q8N2S1 1624 aa36.25■■■■□ 3.39
SMPD1-209ENST00000533196 FAM50AQ14320 339 aaKnown RBP36.24■■■■□ 3.39
SMPD1-209ENST00000533196 ARHGAP31Q2M1Z3 1444 aa36.24■■■■□ 3.39
SMPD1-209ENST00000533196 ERVK-7P63135 1459 aa36.24■■■■□ 3.39
SMPD1-209ENST00000533196 THEMISQ8N1K5 641 aaPredicted RBP36.22■■■■□ 3.39
SMPD1-209ENST00000533196 UGGT1Q9NYU2 1555 aa36.22■■■■□ 3.39
SMPD1-209ENST00000533196 POLR1AO95602 1720 aaPredicted RBP36.22■■■■□ 3.39
SMPD1-209ENST00000533196 KANK1Q14678 1352 aa36.21■■■■□ 3.39
SMPD1-209ENST00000533196 CFAP65Q6ZU64 1925 aaKnown RBP36.2■■■■□ 3.39
SMPD1-209ENST00000533196 IQSEC2Q5JU85 1478 aa36.18■■■■□ 3.38
SMPD1-209ENST00000533196 LMTK2Q8IWU2 1503 aa36.13■■■■□ 3.38
SMPD1-209ENST00000533196 ANKLE2Q86XL3 938 aa36.13■■■■□ 3.37
SMPD1-209ENST00000533196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.13■■■■□ 3.37
SMPD1-209ENST00000533196 VWDEQ8N2E2 1590 aa36.13■■■■□ 3.37
SMPD1-209ENST00000533196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.12■■■■□ 3.37
SMPD1-209ENST00000533196 NEURL4Q96JN8 1562 aa36.11■■■■□ 3.37
SMPD1-209ENST00000533196 ANKRD50Q9ULJ7 1429 aa36.08■■■■□ 3.37
SMPD1-209ENST00000533196 ZNF335Q9H4Z2 1342 aaPredicted RBP36.08■■■■□ 3.37
SMPD1-209ENST00000533196 MED14O60244 1454 aa36.05■■■■□ 3.36
SMPD1-209ENST00000533196 UBR1Q8IWV7 1749 aa36.04■■■■□ 3.36
SMPD1-209ENST00000533196 ROCK1Q13464 1354 aa36.02■■■■□ 3.36
SMPD1-209ENST00000533196 NPHP4O75161 1426 aaPredicted RBP36■■■■□ 3.35
SMPD1-209ENST00000533196 EFCAB6Q5THR3 1501 aa35.98■■■■□ 3.35
SMPD1-209ENST00000533196 IQGAP1P46940 1657 aa35.94■■■■□ 3.34
SMPD1-209ENST00000533196 KDM5AP29375 1690 aaKnown RBP35.93■■■■□ 3.34
SMPD1-209ENST00000533196 SLIT1O75093 1534 aa35.92■■■■□ 3.34
SMPD1-209ENST00000533196 CPS1P31327 1500 aa35.92■■■■□ 3.34
SMPD1-209ENST00000533196 ARHGAP23Q9P227 1491 aa35.92■■■■□ 3.34
SMPD1-209ENST00000533196 PIK3C2BO00750 1634 aa35.91■■■■□ 3.34
SMPD1-209ENST00000533196 RPRD2Q5VT52 1461 aaKnown RBP35.91■■■■□ 3.34
SMPD1-209ENST00000533196 NOS1P29475 1434 aa35.91■■■■□ 3.34
SMPD1-209ENST00000533196 UNC13BO14795 1591 aa35.89■■■■□ 3.34
SMPD1-209ENST00000533196 TET3O43151 1660 aa35.88■■■■□ 3.33
SMPD1-209ENST00000533196 PPARGC1BQ86YN6 1023 aaKnown RBP35.88■■■■□ 3.33
SMPD1-209ENST00000533196 SCAF11Q99590 1463 aaKnown RBP35.87■■■■□ 3.33
SMPD1-209ENST00000533196 SYNMO15061 1565 aa35.86■■■■□ 3.33
SMPD1-209ENST00000533196 GCC2Q8IWJ2 1684 aa35.84■■■■□ 3.33
SMPD1-209ENST00000533196 SLC52A1Q9NWF4 448 aa35.83■■■■□ 3.33
SMPD1-209ENST00000533196 STAG3Q9UJ98 1225 aa35.83■■■■□ 3.33
SMPD1-209ENST00000533196 IDI1Q13907 227 aa35.82■■■■□ 3.32
SMPD1-209ENST00000533196 EID1Q9Y6B2 187 aa35.81■■■■□ 3.32
SMPD1-209ENST00000533196 TMEM2Q9UHN6 1383 aa35.8■■■■□ 3.32
SMPD1-209ENST00000533196 TXNDC2Q86VQ3 553 aa35.8■■■■□ 3.32
SMPD1-209ENST00000533196 RRBP1Q9P2E9 1410 aaKnown RBP35.79■■■■□ 3.32
SMPD1-209ENST00000533196 ITGAEP38570 1179 aa35.78■■■■□ 3.32
SMPD1-209ENST00000533196 LTKP29376 864 aa35.77■■■■□ 3.32
SMPD1-209ENST00000533196 UBAP1LF5GYI3 381 aa35.76■■■■□ 3.32
SMPD1-209ENST00000533196 IQGAP3Q86VI3 1631 aa35.75■■■■□ 3.31
SMPD1-209ENST00000533196 ADGRB3O60242 1522 aa35.75■■■■□ 3.31
SMPD1-209ENST00000533196 E9PCH4 1651 aa35.68■■■■□ 3.3
SMPD1-209ENST00000533196 NUP155O75694 1391 aa35.67■■■■□ 3.3
SMPD1-209ENST00000533196 STRCP1A6NGW2 1772 aa35.67■■■■□ 3.3
SMPD1-209ENST00000533196 TOM1O60784 492 aa35.64■■■■□ 3.3
SMPD1-209ENST00000533196 LRRC7Q96NW7 1537 aa35.61■■■■□ 3.29
SMPD1-209ENST00000533196 MYO5BQ9ULV0 1848 aa35.59■■■■□ 3.29
SMPD1-209ENST00000533196 TMEM131LA2VDJ0 1609 aa35.58■■■■□ 3.29
SMPD1-209ENST00000533196 HDGFP51858 240 aaKnown RBP35.57■■■■□ 3.28
SMPD1-209ENST00000533196 ZFYVE9O95405 1425 aa35.54■■■■□ 3.28
SMPD1-209ENST00000533196 NAIPQ13075 1403 aa35.51■■■■□ 3.28
SMPD1-209ENST00000533196 RIMS2Q9UQ26 1411 aa35.49■■■■□ 3.27
SMPD1-209ENST00000533196 PLEKHG1Q9ULL1 1385 aa35.47■■■■□ 3.27
SMPD1-209ENST00000533196 KCNA6P17658 529 aa35.46■■■■□ 3.27
SMPD1-209ENST00000533196 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms