RNA–Protein interactions for RNA: ENST00000533194.5

CCT3-216, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-216ENST00000533194 TSPY4P0CV99 314 aa11.5□□□□□ -0.57
CCT3-216ENST00000533194 TSPY10P0CW01 314 aa11.5□□□□□ -0.57
CCT3-216ENST00000533194 ZNF142P52746 1687 aaPredicted RBP11.49□□□□□ -0.57
CCT3-216ENST00000533194 PIP4K2BP78356 416 aa11.49□□□□□ -0.57
CCT3-216ENST00000533194 ANKLE2Q86XL3 938 aa11.49□□□□□ -0.57
CCT3-216ENST00000533194 THEMISQ8N1K5 641 aaPredicted RBP11.49□□□□□ -0.57
CCT3-216ENST00000533194 CCDC141Q6ZP82 1450 aa11.49□□□□□ -0.57
CCT3-216ENST00000533194 MBD5Q9P267 1494 aa11.49□□□□□ -0.57
CCT3-216ENST00000533194 TIAM1Q13009 1591 aa11.49□□□□□ -0.57
CCT3-216ENST00000533194 ADGBQ8N7X0 1667 aa11.49□□□□□ -0.57
CCT3-216ENST00000533194 KDM5DQ9BY66 1539 aa11.48□□□□□ -0.57
CCT3-216ENST00000533194 FAM135AQ9P2D6 1515 aa11.47□□□□□ -0.57
CCT3-216ENST00000533194 CPS1P31327 1500 aa11.46□□□□□ -0.57
CCT3-216ENST00000533194 PZPP20742 1482 aa11.46□□□□□ -0.57
CCT3-216ENST00000533194 FBXO31Q5XUX0 539 aaPredicted RBP11.46□□□□□ -0.57
CCT3-216ENST00000533194 CAMSAP2Q08AD1 1489 aa11.45□□□□□ -0.58
CCT3-216ENST00000533194 PHF23Q9BUL5 403 aaPredicted RBP11.45□□□□□ -0.58
CCT3-216ENST00000533194 NCOA2Q15596 1464 aa11.44□□□□□ -0.58
CCT3-216ENST00000533194 NLRP1Q9C000 1473 aa11.44□□□□□ -0.58
CCT3-216ENST00000533194 SHANK2Q9UPX8 1470 aa11.44□□□□□ -0.58
CCT3-216ENST00000533194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCT3-216ENST00000533194 MIA2Q96PC5 1412 aa11.43□□□□□ -0.58
CCT3-216ENST00000533194 DNMT1P26358 1616 aaKnown RBP11.43□□□□□ -0.58
CCT3-216ENST00000533194 HSPA1LP34931 641 aa11.43□□□□□ -0.58
CCT3-216ENST00000533194 NPHP4O75161 1426 aaPredicted RBP11.42□□□□□ -0.58
CCT3-216ENST00000533194 UGGT1Q9NYU2 1555 aa11.41□□□□□ -0.58
CCT3-216ENST00000533194 ARHGEF5Q12774 1597 aa11.38□□□□□ -0.59
CCT3-216ENST00000533194 NEURL4Q96JN8 1562 aa11.38□□□□□ -0.59
CCT3-216ENST00000533194 SENP3Q9H4L4 574 aaPredicted RBP11.37□□□□□ -0.59
CCT3-216ENST00000533194 POLR1AO95602 1720 aaPredicted RBP11.37□□□□□ -0.59
CCT3-216ENST00000533194 MED14O60244 1454 aa11.37□□□□□ -0.59
CCT3-216ENST00000533194 EID1Q9Y6B2 187 aa11.36□□□□□ -0.59
CCT3-216ENST00000533194 MED1Q15648 1581 aaPredicted RBP11.36□□□□□ -0.59
CCT3-216ENST00000533194 VPS8Q8N3P4 1428 aa11.35□□□□□ -0.59
CCT3-216ENST00000533194 APLP2Q06481 763 aa11.35□□□□□ -0.59
CCT3-216ENST00000533194 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
CCT3-216ENST00000533194 LRRC9Q6ZRR7 1453 aa11.35□□□□□ -0.59
CCT3-216ENST00000533194 DEPDC5O75140 1603 aa11.35□□□□□ -0.59
CCT3-216ENST00000533194 ABCC3O15438 1527 aa11.35□□□□□ -0.59
CCT3-216ENST00000533194 VWDEQ8N2E2 1590 aa11.34□□□□□ -0.59
CCT3-216ENST00000533194 ERVK-7P63135 1459 aa11.34□□□□□ -0.59
CCT3-216ENST00000533194 MYOM3Q5VTT5 1437 aa11.34□□□□□ -0.59
CCT3-216ENST00000533194 TXNDC2Q86VQ3 553 aa11.33□□□□□ -0.6
CCT3-216ENST00000533194 ZC3H13Q5T200 1668 aaKnown RBP11.33□□□□□ -0.6
CCT3-216ENST00000533194 SCAF11Q99590 1463 aaKnown RBP11.32□□□□□ -0.6
CCT3-216ENST00000533194 KANK1Q14678 1352 aa11.32□□□□□ -0.6
CCT3-216ENST00000533194 MAST1Q9Y2H9 1570 aa11.32□□□□□ -0.6
CCT3-216ENST00000533194 RNF17Q9BXT8 1623 aaKnown RBP11.31□□□□□ -0.6
CCT3-216ENST00000533194 KIF15Q9NS87 1388 aa11.31□□□□□ -0.6
CCT3-216ENST00000533194 DUOX2Q9NRD8 1548 aa11.31□□□□□ -0.6
CCT3-216ENST00000533194 IQGAP1P46940 1657 aa11.31□□□□□ -0.6
CCT3-216ENST00000533194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.61e-10■■□□□ 12.8
CCT3-216ENST00000533194 EIF2AK4Q9P2K8 1649 aaKnown RBP11.31□□□□□ -0.6
CCT3-216ENST00000533194 LRRC7Q96NW7 1537 aa11.3□□□□□ -0.6
CCT3-216ENST00000533194 SYNMO15061 1565 aa11.3□□□□□ -0.6
CCT3-216ENST00000533194 RRP7BPQ9NSQ0 103 aa11.3□□□□□ -0.6
CCT3-216ENST00000533194 ERBINQ96RT1 1412 aa11.28□□□□□ -0.6
CCT3-216ENST00000533194 MAP3K1Q13233 1512 aa11.28□□□□□ -0.6
CCT3-216ENST00000533194 ARHGAP31Q2M1Z3 1444 aa11.27□□□□□ -0.6
CCT3-216ENST00000533194 KANK4Q5T7N3 995 aaPredicted RBP11.27□□□□□ -0.61
CCT3-216ENST00000533194 BCANQ96GW7 911 aa11.27□□□□□ -0.61
CCT3-216ENST00000533194 LTKP29376 864 aa11.26□□□□□ -0.61
CCT3-216ENST00000533194 ANKRD30AQ9BXX3 1397 aa11.26□□□□□ -0.61
CCT3-216ENST00000533194 TMEM2Q9UHN6 1383 aa11.26□□□□□ -0.61
CCT3-216ENST00000533194 SLIT1O75093 1534 aa11.25□□□□□ -0.61
CCT3-216ENST00000533194 ARHGAP23Q9P227 1491 aa11.25□□□□□ -0.61
CCT3-216ENST00000533194 PRDM15P57071 1507 aaPredicted RBP11.25□□□□□ -0.61
CCT3-216ENST00000533194 LOC105371045A0A1W2PR82 267 aa11.24□□□□□ -0.61
CCT3-216ENST00000533194 MROH1Q8NDA8 1641 aa11.24□□□□□ -0.61
CCT3-216ENST00000533194 PROSER2Q86WR7 435 aaPredicted RBP11.23□□□□□ -0.61
CCT3-216ENST00000533194 ABCC5O15440 1437 aa11.23□□□□□ -0.61
CCT3-216ENST00000533194 ALKQ9UM73 1620 aa11.23□□□□□ -0.61
CCT3-216ENST00000533194 KCNA6P17658 529 aa11.22□□□□□ -0.61
CCT3-216ENST00000533194 HDGFP51858 240 aaKnown RBP11.22□□□□□ -0.61
CCT3-216ENST00000533194 DAPK1P53355 1430 aa11.22□□□□□ -0.61
CCT3-216ENST00000533194 TMEM94Q12767 1356 aa11.22□□□□□ -0.61
CCT3-216ENST00000533194 UBR1Q8IWV7 1749 aa11.22□□□□□ -0.61
CCT3-216ENST00000533194 CHIC2Q9UKJ5 165 aa11.22□□□□□ -0.61
CCT3-216ENST00000533194 CEP152O94986 1710 aa11.21□□□□□ -0.61
CCT3-216ENST00000533194 EFCAB6Q5THR3 1501 aa11.21□□□□□ -0.61
CCT3-216ENST00000533194 FAM135BQ49AJ0 1406 aa11.21□□□□□ -0.61
CCT3-216ENST00000533194 PPP1R15AO75807 674 aaPredicted RBP11.21□□□□□ -0.61
CCT3-216ENST00000533194 SLC26A8Q96RN1 970 aa11.21□□□□□ -0.61
CCT3-216ENST00000533194 MSH6P52701 1360 aa11.2□□□□□ -0.62
CCT3-216ENST00000533194 IDI1Q13907 227 aa11.2□□□□□ -0.62
CCT3-216ENST00000533194 SLC52A1Q9NWF4 448 aa11.2□□□□□ -0.62
CCT3-216ENST00000533194 FGD6Q6ZV73 1430 aa11.19□□□□□ -0.62
CCT3-216ENST00000533194 PTPN23Q9H3S7 1636 aa11.19□□□□□ -0.62
CCT3-216ENST00000533194 C14orf37Q86TY3 774 aa11.18□□□□□ -0.62
CCT3-216ENST00000533194 LMTK2Q8IWU2 1503 aa11.18□□□□□ -0.62
CCT3-216ENST00000533194 PIK3C2BO00750 1634 aa11.17□□□□□ -0.62
CCT3-216ENST00000533194 FAM50AQ14320 339 aaKnown RBP11.17□□□□□ -0.62
CCT3-216ENST00000533194 NKTRP30414 1462 aaKnown RBP11.17□□□□□ -0.62
CCT3-216ENST00000533194 STRCP1A6NGW2 1772 aa11.16□□□□□ -0.62
CCT3-216ENST00000533194 ADGRB3O60242 1522 aa11.16□□□□□ -0.62
CCT3-216ENST00000533194 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
CCT3-216ENST00000533194 CROCC2H7BZ55 1655 aa11.16□□□□□ -0.62
CCT3-216ENST00000533194 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.62
CCT3-216ENST00000533194 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCT3-216ENST00000533194 SLAIN2Q9P270 581 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms