RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 SLKQ9H2G2 1235 aaPredicted RBP8.79□□□□□ -1
TGFBR3-210ENST00000533089 CDCA8Q53HL2 280 aa8.79□□□□□ -1
TGFBR3-210ENST00000533089 CCDC66A2RUB6 948 aa8.78□□□□□ -1
TGFBR3-210ENST00000533089 HSP90AB1P08238 724 aaKnown RBP8.78□□□□□ -1
TGFBR3-210ENST00000533089 URB2Q14146 1524 aaKnown RBP8.78□□□□□ -1
TGFBR3-210ENST00000533089 MTERF4Q7Z6M4 381 aaKnown RBP8.78□□□□□ -1
TGFBR3-210ENST00000533089 DRC7Q8IY82 874 aa8.78□□□□□ -1
TGFBR3-210ENST00000533089 SYNJ2O15056 1496 aa8.78□□□□□ -1
TGFBR3-210ENST00000533089 IRX3P78415 501 aaPredicted RBP8.77□□□□□ -1
TGFBR3-210ENST00000533089 GGT6Q6P531 493 aa8.77□□□□□ -1
TGFBR3-210ENST00000533089 SPAG9O60271 1321 aaKnown RBP8.77□□□□□ -1.01
TGFBR3-210ENST00000533089 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.77□□□□□ -1.01
TGFBR3-210ENST00000533089 CARD11Q9BXL7 1154 aa8.77□□□□□ -1.01
TGFBR3-210ENST00000533089 FGD1P98174 961 aa8.77□□□□□ -1.01
TGFBR3-210ENST00000533089 NUDCQ9Y266 331 aa8.77□□□□□ -1.01
TGFBR3-210ENST00000533089 KIAA0586Q9BVV6 1533 aa8.76□□□□□ -1.01
TGFBR3-210ENST00000533089 U2SURPO15042 1029 aaKnown RBP8.76□□□□□ -1.01
TGFBR3-210ENST00000533089 KANK4Q5T7N3 995 aaPredicted RBP8.76□□□□□ -1.01
TGFBR3-210ENST00000533089 ZHX1Q9UKY1 873 aaPredicted RBP8.76□□□□□ -1.01
TGFBR3-210ENST00000533089 CHMP4BQ9H444 224 aaKnown RBP8.76□□□□□ -1.01
TGFBR3-210ENST00000533089 WWC1Q8IX03 1113 aa8.76□□□□□ -1.01
TGFBR3-210ENST00000533089 PRDM10Q9NQV6 1147 aa8.76□□□□□ -1.01
TGFBR3-210ENST00000533089 NOM1Q5C9Z4 860 aaKnown RBP8.75□□□□□ -1.01
TGFBR3-210ENST00000533089 FAM69CQ0P6D2 419 aa8.75□□□□□ -1.01
TGFBR3-210ENST00000533089 PRXQ9BXM0 1461 aa8.75□□□□□ -1.01
TGFBR3-210ENST00000533089 FRAT1Q92837 279 aaPredicted RBP8.74□□□□□ -1.01
TGFBR3-210ENST00000533089 KCNJ4P48050 445 aa8.74□□□□□ -1.01
TGFBR3-210ENST00000533089 R3HCC1Q9Y3T6 440 aaKnown RBP8.74□□□□□ -1.01
TGFBR3-210ENST00000533089 KLHL34Q8N239 644 aa8.74□□□□□ -1.01
TGFBR3-210ENST00000533089 TAF3Q5VWG9 929 aa8.74□□□□□ -1.01
TGFBR3-210ENST00000533089 EFCAB5A4FU69 1503 aa8.73□□□□□ -1.01
TGFBR3-210ENST00000533089 HSCBQ8IWL3 235 aa8.73□□□□□ -1.01
TGFBR3-210ENST00000533089 CC2D1BQ5T0F9 858 aaKnown RBP8.73□□□□□ -1.01
TGFBR3-210ENST00000533089 KIF21BO75037 1637 aa8.73□□□□□ -1.01
TGFBR3-210ENST00000533089 SAFB2Q14151 953 aaKnown RBP eCLIP8.73□□□□□ -1.01
TGFBR3-210ENST00000533089 DHX37Q8IY37 1157 aaKnown RBP8.73□□□□□ -1.01
TGFBR3-210ENST00000533089 NRDCO43847 1150 aa8.73□□□□□ -1.01
TGFBR3-210ENST00000533089 BRD2P25440 801 aaKnown RBP8.73□□□□□ -1.01
TGFBR3-210ENST00000533089 HNRNPMP52272 730 aaKnown RBP eCLIP8.72□□□□□ -1.011e-6■■■□□ 17.7
TGFBR3-210ENST00000533089 CCDC9Q9Y3X0 531 aaKnown RBP8.72□□□□□ -1.01
TGFBR3-210ENST00000533089 CASKIN1Q8WXD9 1431 aa8.71□□□□□ -1.01
TGFBR3-210ENST00000533089 GBP4Q96PP9 640 aa8.71□□□□□ -1.01
TGFBR3-210ENST00000533089 GRIN2AQ12879 1464 aa8.71□□□□□ -1.02
TGFBR3-210ENST00000533089 SRPK2P78362 688 aaKnown RBP8.71□□□□□ -1.02
TGFBR3-210ENST00000533089 TEX35Q5T0J7 233 aa8.71□□□□□ -1.02
TGFBR3-210ENST00000533089 KIF3BO15066 747 aa8.71□□□□□ -1.02
TGFBR3-210ENST00000533089 ZNF330Q9Y3S2 320 aaPredicted RBP8.71□□□□□ -1.02
TGFBR3-210ENST00000533089 MEX3CQ5U5Q3 659 aaKnown RBP8.7□□□□□ -1.02
TGFBR3-210ENST00000533089 RBM25P49756 843 aaKnown RBP8.7□□□□□ -1.02
TGFBR3-210ENST00000533089 SETD5Q9C0A6 1442 aa8.7□□□□□ -1.02
TGFBR3-210ENST00000533089 PAK3O75914 559 aaPredicted RBP8.7□□□□□ -1.02
TGFBR3-210ENST00000533089 TNNT1P13805 278 aa8.7□□□□□ -1.02
TGFBR3-210ENST00000533089 SLC4A3P48751 1232 aa8.7□□□□□ -1.02
TGFBR3-210ENST00000533089 GPATCH11Q8N954 259 aa8.69□□□□□ -1.02
TGFBR3-210ENST00000533089 CSPP1Q1MSJ5 1256 aa8.69□□□□□ -1.02
TGFBR3-210ENST00000533089 CSB-PGBD3P0DP91 1061 aa8.69□□□□□ -1.02
TGFBR3-210ENST00000533089 NUP155O75694 1391 aa8.68□□□□□ -1.02
TGFBR3-210ENST00000533089 NOC3LQ8WTT2 800 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-210ENST00000533089 CGNQ9P2M7 1197 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-210ENST00000533089 ZNF608Q9ULD9 1512 aaPredicted RBP8.68□□□□□ -1.02
TGFBR3-210ENST00000533089 UACAQ9BZF9 1416 aa8.68□□□□□ -1.02
TGFBR3-210ENST00000533089 TCERG1O14776 1098 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-210ENST00000533089 STK26Q9P289 416 aa8.68□□□□□ -1.02
TGFBR3-210ENST00000533089 STK11IPQ8N1F8 1099 aa8.68□□□□□ -1.02
TGFBR3-210ENST00000533089 CUL7Q14999 1698 aa8.67□□□□□ -1.02
TGFBR3-210ENST00000533089 WASHC2CQ9Y4E1 1318 aa8.67□□□□□ -1.02
TGFBR3-210ENST00000533089 FYCO1Q9BQS8 1478 aa8.67□□□□□ -1.02
TGFBR3-210ENST00000533089 RTF1Q92541 710 aaKnown RBP8.66□□□□□ -1.02
TGFBR3-210ENST00000533089 PKD2Q13563 968 aa8.66□□□□□ -1.02
TGFBR3-210ENST00000533089 HSP90AB3PQ58FF7 597 aa8.66□□□□□ -1.02
TGFBR3-210ENST00000533089 TMX4Q9H1E5 349 aaPredicted RBP8.66□□□□□ -1.02
TGFBR3-210ENST00000533089 MYOM3Q5VTT5 1437 aa8.66□□□□□ -1.02
TGFBR3-210ENST00000533089 HSP90B1P14625 803 aaKnown RBP8.66□□□□□ -1.02
TGFBR3-210ENST00000533089 PDCL3Q9H2J4 239 aa8.66□□□□□ -1.02
TGFBR3-210ENST00000533089 GPS2Q13227 327 aa8.66□□□□□ -1.02
TGFBR3-210ENST00000533089 CWC15Q9P013 229 aaKnown RBP8.65□□□□□ -1.02
TGFBR3-210ENST00000533089 HTATSF1O43719 755 aaKnown RBP8.65□□□□□ -1.02
TGFBR3-210ENST00000533089 IQGAP2Q13576 1575 aa8.65□□□□□ -1.02
TGFBR3-210ENST00000533089 NFKBIBQ15653 356 aa8.65□□□□□ -1.03
TGFBR3-210ENST00000533089 DCAF11Q8TEB1 546 aa8.64□□□□□ -1.03
TGFBR3-210ENST00000533089 VGLL3A8MV65 326 aa8.64□□□□□ -1.03
TGFBR3-210ENST00000533089 RDXP35241 583 aaKnown RBP8.64□□□□□ -1.03
TGFBR3-210ENST00000533089 GOLGA6L4A6NEF3 574 aa8.64□□□□□ -1.03
TGFBR3-210ENST00000533089 BIVM-ERCC5R4GMW8 1640 aa8.63□□□□□ -1.03
TGFBR3-210ENST00000533089 WDR62O43379 1518 aa8.63□□□□□ -1.03
TGFBR3-210ENST00000533089 TMF1P82094 1093 aa8.63□□□□□ -1.03
TGFBR3-210ENST00000533089 GNL2Q13823 731 aaKnown RBP8.63□□□□□ -1.03
TGFBR3-210ENST00000533089 KIAA1211Q6ZU35 1233 aa8.63□□□□□ -1.03
TGFBR3-210ENST00000533089 MORC1Q86VD1 984 aa8.63□□□□□ -1.03
TGFBR3-210ENST00000533089 DEF6Q9H4E7 631 aa8.63□□□□□ -1.03
TGFBR3-210ENST00000533089 PLEKHH2Q8IVE3 1493 aa8.63□□□□□ -1.03
TGFBR3-210ENST00000533089 APBB1O00213 710 aa8.63□□□□□ -1.03
TGFBR3-210ENST00000533089 EID1Q9Y6B2 187 aa8.63□□□□□ -1.03
TGFBR3-210ENST00000533089 MS4A1P11836 297 aa8.62□□□□□ -1.03
TGFBR3-210ENST00000533089 NEFHP12036 1026 aa8.62□□□□□ -1.03
TGFBR3-210ENST00000533089 ERICH4A6NGS2 130 aa8.62□□□□□ -1.03
TGFBR3-210ENST00000533089 TROQ12816 1431 aaPredicted RBP8.62□□□□□ -1.03
TGFBR3-210ENST00000533089 DDX11L8A8MPP1 907 aa8.61□□□□□ -1.03
TGFBR3-210ENST00000533089 MSH5O43196 834 aa8.61□□□□□ -1.03
TGFBR3-210ENST00000533089 AEBP2Q6ZN18 517 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms