RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 SETD1BQ9UPS6 1966 aaKnown RBP21.49■■□□□ 1.03
COL16A1-217ENST00000532877 MYT1LQ9UL68 1186 aa21.48■■□□□ 1.03
COL16A1-217ENST00000532877 DUOX2Q9NRD8 1548 aa21.47■■□□□ 1.03
COL16A1-217ENST00000532877 SOCS7O14512 581 aa21.47■■□□□ 1.03
COL16A1-217ENST00000532877 SETD5Q9C0A6 1442 aa21.45■■□□□ 1.02
COL16A1-217ENST00000532877 ATP10AO60312 1499 aa21.42■■□□□ 1.02
COL16A1-217ENST00000532877 A2MP01023 1474 aa21.42■■□□□ 1.02
COL16A1-217ENST00000532877 ERBINQ96RT1 1412 aa21.42■■□□□ 1.02
COL16A1-217ENST00000532877 ANKRD50Q9ULJ7 1429 aa21.42■■□□□ 1.02
COL16A1-217ENST00000532877 DISP3Q9P2K9 1392 aa21.41■■□□□ 1.02
COL16A1-217ENST00000532877 RAB3GAP2Q9H2M9 1393 aa21.4■■□□□ 1.02
COL16A1-217ENST00000532877 REREQ9P2R6 1566 aa21.4■■□□□ 1.02
COL16A1-217ENST00000532877 DHX29Q7Z478 1369 aaKnown RBP21.39■■□□□ 1.02
COL16A1-217ENST00000532877 EIF2AK4Q9P2K8 1649 aaKnown RBP21.39■■□□□ 1.01
COL16A1-217ENST00000532877 PLPPR3Q6T4P5 718 aa21.38■■□□□ 1.01
COL16A1-217ENST00000532877 SPATA31D1Q6ZQQ2 1576 aa21.36■■□□□ 1.01
COL16A1-217ENST00000532877 MLECQ14165 292 aa21.36■■□□□ 1.01
COL16A1-217ENST00000532877 LTBP4Q8N2S1 1624 aa21.35■■□□□ 1.01
COL16A1-217ENST00000532877 PTPRTO14522 1441 aa21.33■■□□□ 1.01
COL16A1-217ENST00000532877 CEBPAP49715 358 aaPredicted RBP21.33■■□□□ 1.01
COL16A1-217ENST00000532877 C3P01024 1663 aa21.32■■□□□ 1
COL16A1-217ENST00000532877 DEPDC5O75140 1603 aa21.32■■□□□ 1
COL16A1-217ENST00000532877 UNC13BO14795 1591 aa21.31■■□□□ 1
COL16A1-217ENST00000532877 AGLP35573 1532 aa21.31■■□□□ 1
COL16A1-217ENST00000532877 RNF17Q9BXT8 1623 aaKnown RBP21.31■■□□□ 1
COL16A1-217ENST00000532877 DMRT2Q9Y5R5 561 aa21.31■■□□□ 1
COL16A1-217ENST00000532877 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
COL16A1-217ENST00000532877 IQSEC2Q5JU85 1478 aa21.29■■□□□ 1
COL16A1-217ENST00000532877 HRCP23327 699 aa21.29■■□□□ 1
COL16A1-217ENST00000532877 MROH1Q8NDA8 1641 aa21.28■■□□□ 1
COL16A1-217ENST00000532877 KIF3BO15066 747 aa21.27■■□□□ 1
COL16A1-217ENST00000532877 PRDM15P57071 1507 aaPredicted RBP21.27■■□□□ 1
COL16A1-217ENST00000532877 KDM5DQ9BY66 1539 aa21.25■□□□□ 0.99
COL16A1-217ENST00000532877 ACIN1Q9UKV3 1341 aaKnown RBP21.23■□□□□ 0.99
COL16A1-217ENST00000532877 IQGAP3Q86VI3 1631 aa21.22■□□□□ 0.99
COL16A1-217ENST00000532877 VWDEQ8N2E2 1590 aa21.22■□□□□ 0.99
COL16A1-217ENST00000532877 TRIM52Q96A61 297 aa21.21■□□□□ 0.99
COL16A1-217ENST00000532877 PZPP20742 1482 aa21.2■□□□□ 0.98
COL16A1-217ENST00000532877 NUP155O75694 1391 aa21.2■□□□□ 0.98
COL16A1-217ENST00000532877 FAM135AQ9P2D6 1515 aa21.19■□□□□ 0.98
COL16A1-217ENST00000532877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.18■□□□□ 0.98
COL16A1-217ENST00000532877 GGT6Q6P531 493 aa21.17■□□□□ 0.98
COL16A1-217ENST00000532877 KANK1Q14678 1352 aa21.17■□□□□ 0.98
COL16A1-217ENST00000532877 CEP152O94986 1710 aa21.17■□□□□ 0.98
COL16A1-217ENST00000532877 ZC3H13Q5T200 1668 aaKnown RBP21.16■□□□□ 0.98
COL16A1-217ENST00000532877 ABCC3O15438 1527 aa21.15■□□□□ 0.98
COL16A1-217ENST00000532877 DHX57Q6P158 1386 aaKnown RBP21.15■□□□□ 0.98
COL16A1-217ENST00000532877 TET3O43151 1660 aa21.14■□□□□ 0.97
COL16A1-217ENST00000532877 LMTK2Q8IWU2 1503 aa21.14■□□□□ 0.97
COL16A1-217ENST00000532877 MROH2AA6NES4 1674 aa21.13■□□□□ 0.97
COL16A1-217ENST00000532877 MPHOSPH9Q99550 1183 aa21.11■□□□□ 0.97
COL16A1-217ENST00000532877 EFCAB6Q5THR3 1501 aa21.1■□□□□ 0.97
COL16A1-217ENST00000532877 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
COL16A1-217ENST00000532877 CAMSAP1Q5T5Y3 1602 aa21.1■□□□□ 0.97
COL16A1-217ENST00000532877 CLTCQ00610 1675 aaKnown RBP21.09■□□□□ 0.97
COL16A1-217ENST00000532877 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
COL16A1-217ENST00000532877 WASHC2CQ9Y4E1 1318 aa21.08■□□□□ 0.97
COL16A1-217ENST00000532877 NPATQ14207 1427 aa21.07■□□□□ 0.96
COL16A1-217ENST00000532877 CNTLNQ9NXG0 1405 aa21.07■□□□□ 0.96
COL16A1-217ENST00000532877 E9PCH4 1651 aa21.07■□□□□ 0.96
COL16A1-217ENST00000532877 ZNF142P52746 1687 aaPredicted RBP21.07■□□□□ 0.96
COL16A1-217ENST00000532877 PKD2Q13563 968 aa21.04■□□□□ 0.96
COL16A1-217ENST00000532877 FOXD1Q16676 465 aa21.01■□□□□ 0.95
COL16A1-217ENST00000532877 CCER1Q8TC90 406 aaPredicted RBP21.01■□□□□ 0.95
COL16A1-217ENST00000532877 ARHGAP31Q2M1Z3 1444 aa21.01■□□□□ 0.95
COL16A1-217ENST00000532877 PLA2R1Q13018 1463 aa21.01■□□□□ 0.95
COL16A1-217ENST00000532877 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
COL16A1-217ENST00000532877 MYO3AQ8NEV4 1616 aa21■□□□□ 0.95
COL16A1-217ENST00000532877 ESF1Q9H501 851 aaKnown RBP20.99■□□□□ 0.95
COL16A1-217ENST00000532877 SPHKAPQ2M3C7 1700 aa20.98■□□□□ 0.95
COL16A1-217ENST00000532877 ZNF335Q9H4Z2 1342 aaPredicted RBP20.98■□□□□ 0.95
COL16A1-217ENST00000532877 ZMYM3Q14202 1370 aa20.97■□□□□ 0.95
COL16A1-217ENST00000532877 ANKRD30BQ9BXX2 1392 aa20.96■□□□□ 0.95
COL16A1-217ENST00000532877 CFAP65Q6ZU64 1925 aaKnown RBP20.95■□□□□ 0.94
COL16A1-217ENST00000532877 TRPM2O94759 1503 aa20.94■□□□□ 0.94
COL16A1-217ENST00000532877 CEP170BQ9Y4F5 1589 aaPredicted RBP20.94■□□□□ 0.94
COL16A1-217ENST00000532877 CLSPNQ9HAW4 1339 aa20.94■□□□□ 0.94
COL16A1-217ENST00000532877 NCKAP5LQ9HCH0 1330 aa20.94■□□□□ 0.94
COL16A1-217ENST00000532877 NOS1P29475 1434 aa20.92■□□□□ 0.94
COL16A1-217ENST00000532877 ERVK-7P63135 1459 aa20.92■□□□□ 0.94
COL16A1-217ENST00000532877 MED1Q15648 1581 aaPredicted RBP20.91■□□□□ 0.94
COL16A1-217ENST00000532877 SYNMO15061 1565 aa20.9■□□□□ 0.94
COL16A1-217ENST00000532877 UBAP1LF5GYI3 381 aa20.9■□□□□ 0.94
COL16A1-217ENST00000532877 CLTCL1P53675 1640 aa20.88■□□□□ 0.93
COL16A1-217ENST00000532877 FBXO31Q5XUX0 539 aaPredicted RBP20.87■□□□□ 0.93
COL16A1-217ENST00000532877 UGGT1Q9NYU2 1555 aa20.87■□□□□ 0.93
COL16A1-217ENST00000532877 CCDC144AA2RUR9 1427 aa20.87■□□□□ 0.93
COL16A1-217ENST00000532877 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
COL16A1-217ENST00000532877 NEURL4Q96JN8 1562 aa20.85■□□□□ 0.93
COL16A1-217ENST00000532877 POLR1AO95602 1720 aaPredicted RBP20.84■□□□□ 0.93
COL16A1-217ENST00000532877 ALKQ9UM73 1620 aa20.84■□□□□ 0.93
COL16A1-217ENST00000532877 SIN3AQ96ST3 1273 aa20.83■□□□□ 0.93
COL16A1-217ENST00000532877 TNRQ92752 1358 aa20.82■□□□□ 0.92
COL16A1-217ENST00000532877 A2ML1A8K2U0 1454 aa20.81■□□□□ 0.92
COL16A1-217ENST00000532877 HSPA1LP34931 641 aa20.79■□□□□ 0.92
COL16A1-217ENST00000532877 CPS1P31327 1500 aa20.78■□□□□ 0.92
COL16A1-217ENST00000532877 KIF1BO60333 1816 aa20.78■□□□□ 0.92
COL16A1-217ENST00000532877 NEUROD1Q13562 356 aa20.78■□□□□ 0.92
COL16A1-217ENST00000532877 SLC52A1Q9NWF4 448 aa20.76■□□□□ 0.91
COL16A1-217ENST00000532877 ADGRB3O60242 1522 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms