RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 SOGA1O94964 1423 aa9.39□□□□□ -0.91
CTNND1-233ENST00000532787 APBB1O00213 710 aa9.39□□□□□ -0.91
CTNND1-233ENST00000532787 APPP05067 770 aa9.39□□□□□ -0.91
CTNND1-233ENST00000532787 TPM1P09493 284 aa9.39□□□□□ -0.91
CTNND1-233ENST00000532787 EFCAB2Q5VUJ9 269 aa9.39□□□□□ -0.91
CTNND1-233ENST00000532787 TPM2P07951 284 aa9.39□□□□□ -0.91
CTNND1-233ENST00000532787 TSR1Q2NL82 804 aaKnown RBP9.39□□□□□ -0.91
CTNND1-233ENST00000532787 AAMPQ13685 434 aa9.38□□□□□ -0.91
CTNND1-233ENST00000532787 LRRFIP1Q32MZ4 808 aaKnown RBP9.38□□□□□ -0.91
CTNND1-233ENST00000532787 CCDC18Q5T9S5 1454 aa9.38□□□□□ -0.91
CTNND1-233ENST00000532787 CGNL1Q0VF96 1302 aa9.38□□□□□ -0.91
CTNND1-233ENST00000532787 FANCIQ9NVI1 1328 aa9.38□□□□□ -0.91
CTNND1-233ENST00000532787 GSE1Q14687 1217 aa9.38□□□□□ -0.91
CTNND1-233ENST00000532787 E9PSI1 815 aa9.37□□□□□ -0.91
CTNND1-233ENST00000532787 GOLGA6L19H0YKK7 550 aa9.37□□□□□ -0.91
CTNND1-233ENST00000532787 SF3A1Q15459 793 aaKnown RBP9.37□□□□□ -0.91
CTNND1-233ENST00000532787 TAF7LQ5H9L4 462 aa9.37□□□□□ -0.91
CTNND1-233ENST00000532787 SMARCA2P51531 1590 aa9.37□□□□□ -0.91
CTNND1-233ENST00000532787 RASSF8Q8NHQ8 419 aa9.37□□□□□ -0.91
CTNND1-233ENST00000532787 ZBED9Q6R2W3 1325 aa9.36□□□□□ -0.91
CTNND1-233ENST00000532787 PKNOX2Q96KN3 472 aa9.36□□□□□ -0.91
CTNND1-233ENST00000532787 DDX49Q9Y6V7 483 aaKnown RBP9.35□□□□□ -0.91
CTNND1-233ENST00000532787 ROCK1Q13464 1354 aa9.35□□□□□ -0.91
CTNND1-233ENST00000532787 H3BQV1 296 aa9.35□□□□□ -0.91
CTNND1-233ENST00000532787 IFFO2Q5TF58 517 aa9.35□□□□□ -0.91
CTNND1-233ENST00000532787 RUFY2Q8WXA3 655 aa9.35□□□□□ -0.91
CTNND1-233ENST00000532787 PDE4AP27815 886 aa9.35□□□□□ -0.91
CTNND1-233ENST00000532787 TEX35Q5T0J7 233 aa9.35□□□□□ -0.91
CTNND1-233ENST00000532787 REC8O95072 547 aa9.34□□□□□ -0.91
CTNND1-233ENST00000532787 TPD52L1Q16890 204 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-233ENST00000532787 ZKSCAN2Q63HK3 967 aa9.34□□□□□ -0.91
CTNND1-233ENST00000532787 BECN2A8MW95 431 aa9.34□□□□□ -0.91
CTNND1-233ENST00000532787 CSB-PGBD3P0DP91 1061 aa9.34□□□□□ -0.91
CTNND1-233ENST00000532787 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-233ENST00000532787 STK26Q9P289 416 aa9.34□□□□□ -0.91
CTNND1-233ENST00000532787 FAM184AQ8NB25 1140 aa9.33□□□□□ -0.92
CTNND1-233ENST00000532787 RRP1P56182 461 aaKnown RBP9.33□□□□□ -0.92
CTNND1-233ENST00000532787 HOOK1Q9UJC3 728 aaKnown RBP9.33□□□□□ -0.92
CTNND1-233ENST00000532787 SOX12O15370 315 aa9.33□□□□□ -0.92
CTNND1-233ENST00000532787 SAFB2Q14151 953 aaKnown RBP eCLIP9.33□□□□□ -0.92
CTNND1-233ENST00000532787 PDS5BQ9NTI5 1447 aa9.33□□□□□ -0.92
CTNND1-233ENST00000532787 CPLX2Q6PUV4 134 aaKnown RBP9.33□□□□□ -0.92
CTNND1-233ENST00000532787 MTERF4Q7Z6M4 381 aaKnown RBP9.32□□□□□ -0.92
CTNND1-233ENST00000532787 CCDC47Q96A33 483 aaKnown RBP9.32□□□□□ -0.92
CTNND1-233ENST00000532787 KANK4Q5T7N3 995 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-233ENST00000532787 GGT6Q6P531 493 aa9.32□□□□□ -0.92
CTNND1-233ENST00000532787 ANKRD20A12PQ8NF67 263 aa9.32□□□□□ -0.92
CTNND1-233ENST00000532787 L3MBTL2Q969R5 705 aa9.32□□□□□ -0.92
CTNND1-233ENST00000532787 CHMP5Q9NZZ3 219 aa9.32□□□□□ -0.92
CTNND1-233ENST00000532787 RAPGEF2Q9Y4G8 1499 aa9.32□□□□□ -0.92
CTNND1-233ENST00000532787 DDX19BQ9UMR2 479 aa9.31□□□□□ -0.92
CTNND1-233ENST00000532787 CCDC88BA6NC98 1476 aa9.31□□□□□ -0.92
CTNND1-233ENST00000532787 AKAP17AQ02040 695 aaKnown RBP9.31□□□□□ -0.92
CTNND1-233ENST00000532787 SYNE3Q6ZMZ3 975 aa9.31□□□□□ -0.92
CTNND1-233ENST00000532787 ACBD3Q9H3P7 528 aa9.31□□□□□ -0.92
CTNND1-233ENST00000532787 CHMP3Q9Y3E7 222 aa9.31□□□□□ -0.92
CTNND1-233ENST00000532787 PAK3O75914 559 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-233ENST00000532787 IPO7O95373 1038 aaKnown RBP9.31□□□□□ -0.92
CTNND1-233ENST00000532787 NUCB2P80303 420 aa9.31□□□□□ -0.92
CTNND1-233ENST00000532787 SLC4A10Q6U841 1118 aa9.31□□□□□ -0.92
CTNND1-233ENST00000532787 MARCH6O60337 910 aa9.3□□□□□ -0.92
CTNND1-233ENST00000532787 CDR1P51861 262 aa9.3□□□□□ -0.92
CTNND1-233ENST00000532787 MAP7D2Q96T17 732 aa9.3□□□□□ -0.92
CTNND1-233ENST00000532787 EID1Q9Y6B2 187 aa9.3□□□□□ -0.92
CTNND1-233ENST00000532787 CCDC144AA2RUR9 1427 aa9.3□□□□□ -0.92
CTNND1-233ENST00000532787 ZKSCAN1P17029 563 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-233ENST00000532787 ZNF771Q7L3S4 317 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-233ENST00000532787 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
CTNND1-233ENST00000532787 PRKCSHP14314 528 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-233ENST00000532787 API5Q9BZZ5 524 aaKnown RBP9.29□□□□□ -0.92
CTNND1-233ENST00000532787 ARGLU1Q9NWB6 273 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-233ENST00000532787 AMPHP49418 695 aa9.29□□□□□ -0.92
CTNND1-233ENST00000532787 TRIM29Q14134 588 aa9.29□□□□□ -0.92
CTNND1-233ENST00000532787 CLUAP1Q96AJ1 413 aa9.29□□□□□ -0.92
CTNND1-233ENST00000532787 FOXD1Q16676 465 aa9.28□□□□□ -0.92
CTNND1-233ENST00000532787 NOM1Q5C9Z4 860 aaKnown RBP9.28□□□□□ -0.92
CTNND1-233ENST00000532787 RNF20Q5VTR2 975 aa9.28□□□□□ -0.92
CTNND1-233ENST00000532787 DIAPH3Q9NSV4 1193 aa9.28□□□□□ -0.92
CTNND1-233ENST00000532787 ANKRD45Q5TZF3 282 aa9.28□□□□□ -0.92
CTNND1-233ENST00000532787 CCDC146Q8IYE0 955 aa9.28□□□□□ -0.92
CTNND1-233ENST00000532787 TOP2AP11388 1531 aaKnown RBP9.28□□□□□ -0.92
CTNND1-233ENST00000532787 FOXD4L1Q9NU39 408 aa9.28□□□□□ -0.92
CTNND1-233ENST00000532787 EVC2Q86UK5 1308 aa9.27□□□□□ -0.92
CTNND1-233ENST00000532787 PRKRIP1Q9H875 184 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-233ENST00000532787 WWC1Q8IX03 1113 aa9.27□□□□□ -0.93
CTNND1-233ENST00000532787 DHX57Q6P158 1386 aaKnown RBP9.27□□□□□ -0.93
CTNND1-233ENST00000532787 CECR2Q9BXF3 1484 aa9.27□□□□□ -0.93
CTNND1-233ENST00000532787 NOL8Q76FK4 1167 aaKnown RBP9.27□□□□□ -0.93
CTNND1-233ENST00000532787 AMOTL1Q8IY63 956 aa9.27□□□□□ -0.93
CTNND1-233ENST00000532787 HSP90AB4PQ58FF6 505 aa9.27□□□□□ -0.93
CTNND1-233ENST00000532787 CREBRFQ8IUR6 639 aa9.27□□□□□ -0.93
CTNND1-233ENST00000532787 LETM1O95202 739 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-233ENST00000532787 AK7Q96M32 723 aa9.26□□□□□ -0.93
CTNND1-233ENST00000532787 TOMM22Q9NS69 142 aa9.26□□□□□ -0.93
CTNND1-233ENST00000532787 NGDNQ8NEJ9 315 aaKnown RBP9.26□□□□□ -0.93
CTNND1-233ENST00000532787 RILPL2Q969X0 211 aa9.26□□□□□ -0.93
CTNND1-233ENST00000532787 INTS3Q68E01 1043 aaKnown RBP9.26□□□□□ -0.93
CTNND1-233ENST00000532787 G3V3G9 751 aa9.26□□□□□ -0.93
CTNND1-233ENST00000532787 MLECQ14165 292 aa9.26□□□□□ -0.93
CTNND1-233ENST00000532787 DHX8Q14562 1220 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms