RNA–Protein interactions for RNA: ENST00000532771.5

SYVN1-214, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 709 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-214ENST00000532771 CERKQ8TCT0 537 aa14.95□□□□□ -0.02
SYVN1-214ENST00000532771 ZNF142P52746 1687 aaPredicted RBP14.94□□□□□ -0.02
SYVN1-214ENST00000532771 CAMSAP1Q5T5Y3 1602 aa14.94□□□□□ -0.02
SYVN1-214ENST00000532771 CEP170BQ9Y4F5 1589 aaPredicted RBP14.93□□□□□ -0.02
SYVN1-214ENST00000532771 WASHC2CQ9Y4E1 1318 aa14.92□□□□□ -0.02
SYVN1-214ENST00000532771 PTPN23Q9H3S7 1636 aa14.92□□□□□ -0.02
SYVN1-214ENST00000532771 PZPP20742 1482 aa14.92□□□□□ -0.02
SYVN1-214ENST00000532771 ABCC5O15440 1437 aa14.92□□□□□ -0.02
SYVN1-214ENST00000532771 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
SYVN1-214ENST00000532771 PLA2R1Q13018 1463 aa14.91□□□□□ -0.02
SYVN1-214ENST00000532771 SHANK2Q9UPX8 1470 aa14.91□□□□□ -0.02
SYVN1-214ENST00000532771 RNF17Q9BXT8 1623 aaKnown RBP14.91□□□□□ -0.02
SYVN1-214ENST00000532771 EIF2AK4Q9P2K8 1649 aaKnown RBP14.91□□□□□ -0.02
SYVN1-214ENST00000532771 TCOF1Q13428 1488 aaKnown RBP14.9□□□□□ -0.02
SYVN1-214ENST00000532771 TNRQ92752 1358 aa14.9□□□□□ -0.02
SYVN1-214ENST00000532771 DUOX2Q9NRD8 1548 aa14.9□□□□□ -0.02
SYVN1-214ENST00000532771 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
SYVN1-214ENST00000532771 FBXO31Q5XUX0 539 aaPredicted RBP14.89□□□□□ -0.03
SYVN1-214ENST00000532771 PKD2Q13563 968 aa14.88□□□□□ -0.03
SYVN1-214ENST00000532771 DAPK1P53355 1430 aa14.88□□□□□ -0.03
SYVN1-214ENST00000532771 DNMT1P26358 1616 aaKnown RBP14.88□□□□□ -0.03
SYVN1-214ENST00000532771 CROCC2H7BZ55 1655 aa14.87□□□□□ -0.03
SYVN1-214ENST00000532771 ABCC3O15438 1527 aa14.87□□□□□ -0.03
SYVN1-214ENST00000532771 KIF15Q9NS87 1388 aa14.87□□□□□ -0.03
SYVN1-214ENST00000532771 MROH1Q8NDA8 1641 aa14.87□□□□□ -0.03
SYVN1-214ENST00000532771 NCKAP5LQ9HCH0 1330 aa14.87□□□□□ -0.03
SYVN1-214ENST00000532771 ZC3H13Q5T200 1668 aaKnown RBP14.86□□□□□ -0.03
SYVN1-214ENST00000532771 ERBINQ96RT1 1412 aa14.85□□□□□ -0.03
SYVN1-214ENST00000532771 LTBP4Q8N2S1 1624 aa14.84□□□□□ -0.03
SYVN1-214ENST00000532771 RRP7BPQ9NSQ0 103 aa14.84□□□□□ -0.03
SYVN1-214ENST00000532771 NLRP1Q9C000 1473 aa14.83□□□□□ -0.03
SYVN1-214ENST00000532771 SPATA31D1Q6ZQQ2 1576 aa14.82□□□□□ -0.04
SYVN1-214ENST00000532771 ANKRD30AQ9BXX3 1397 aa14.82□□□□□ -0.04
SYVN1-214ENST00000532771 PRDM15P57071 1507 aaPredicted RBP14.82□□□□□ -0.04
SYVN1-214ENST00000532771 ERVK-7P63135 1459 aa14.81□□□□□ -0.04
SYVN1-214ENST00000532771 CEP152O94986 1710 aa14.8□□□□□ -0.04
SYVN1-214ENST00000532771 IQSEC2Q5JU85 1478 aa14.79□□□□□ -0.04
SYVN1-214ENST00000532771 THEMISQ8N1K5 641 aaPredicted RBP14.79□□□□□ -0.04
SYVN1-214ENST00000532771 ZNF335Q9H4Z2 1342 aaPredicted RBP14.79□□□□□ -0.04
SYVN1-214ENST00000532771 UGGT1Q9NYU2 1555 aa14.79□□□□□ -0.04
SYVN1-214ENST00000532771 CHIC2Q9UKJ5 165 aa14.79□□□□□ -0.04
SYVN1-214ENST00000532771 DEPDC5O75140 1603 aa14.78□□□□□ -0.04
SYVN1-214ENST00000532771 ADGRL2O95490 1459 aa14.78□□□□□ -0.04
SYVN1-214ENST00000532771 ARHGAP31Q2M1Z3 1444 aa14.78□□□□□ -0.04
SYVN1-214ENST00000532771 NEURL4Q96JN8 1562 aa14.77□□□□□ -0.04
SYVN1-214ENST00000532771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.04
SYVN1-214ENST00000532771 FAM50AQ14320 339 aaKnown RBP14.77□□□□□ -0.05
SYVN1-214ENST00000532771 POLR1AO95602 1720 aaPredicted RBP14.76□□□□□ -0.05
SYVN1-214ENST00000532771 ANKLE2Q86XL3 938 aa14.76□□□□□ -0.05
SYVN1-214ENST00000532771 KANK1Q14678 1352 aa14.75□□□□□ -0.05
SYVN1-214ENST00000532771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.75□□□□□ -0.053e-6■■□□□ 11.7
SYVN1-214ENST00000532771 VWDEQ8N2E2 1590 aa14.74□□□□□ -0.05
SYVN1-214ENST00000532771 MED14O60244 1454 aa14.74□□□□□ -0.05
SYVN1-214ENST00000532771 LMTK2Q8IWU2 1503 aa14.73□□□□□ -0.05
SYVN1-214ENST00000532771 NPHP4O75161 1426 aaPredicted RBP14.72□□□□□ -0.05
SYVN1-214ENST00000532771 ANKRD50Q9ULJ7 1429 aa14.72□□□□□ -0.05
SYVN1-214ENST00000532771 CFAP65Q6ZU64 1925 aaKnown RBP14.71□□□□□ -0.05
SYVN1-214ENST00000532771 UBR1Q8IWV7 1749 aa14.7□□□□□ -0.06
SYVN1-214ENST00000532771 CPS1P31327 1500 aa14.68□□□□□ -0.06
SYVN1-214ENST00000532771 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
SYVN1-214ENST00000532771 EFCAB6Q5THR3 1501 aa14.67□□□□□ -0.06
SYVN1-214ENST00000532771 ROCK1Q13464 1354 aa14.67□□□□□ -0.06
SYVN1-214ENST00000532771 ARHGAP23Q9P227 1491 aa14.67□□□□□ -0.06
SYVN1-214ENST00000532771 SLIT1O75093 1534 aa14.66□□□□□ -0.06
SYVN1-214ENST00000532771 SCAF11Q99590 1463 aaKnown RBP14.66□□□□□ -0.06
SYVN1-214ENST00000532771 NOS1P29475 1434 aa14.66□□□□□ -0.06
SYVN1-214ENST00000532771 UBAP1LF5GYI3 381 aa14.65□□□□□ -0.06
SYVN1-214ENST00000532771 PIK3C2BO00750 1634 aa14.65□□□□□ -0.06
SYVN1-214ENST00000532771 RPRD2Q5VT52 1461 aaKnown RBP14.64□□□□□ -0.07
SYVN1-214ENST00000532771 LTKP29376 864 aa14.64□□□□□ -0.07
SYVN1-214ENST00000532771 IDI1Q13907 227 aa14.64□□□□□ -0.07
SYVN1-214ENST00000532771 PPARGC1BQ86YN6 1023 aaKnown RBP14.64□□□□□ -0.07
SYVN1-214ENST00000532771 SYNMO15061 1565 aa14.64□□□□□ -0.07
SYVN1-214ENST00000532771 TMEM2Q9UHN6 1383 aa14.63□□□□□ -0.07
SYVN1-214ENST00000532771 KDM5AP29375 1690 aaKnown RBP14.63□□□□□ -0.07
SYVN1-214ENST00000532771 TXNDC2Q86VQ3 553 aa14.63□□□□□ -0.07
SYVN1-214ENST00000532771 UNC13BO14795 1591 aa14.62□□□□□ -0.07
SYVN1-214ENST00000532771 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
SYVN1-214ENST00000532771 TET3O43151 1660 aa14.61□□□□□ -0.07
SYVN1-214ENST00000532771 SLC52A1Q9NWF4 448 aa14.61□□□□□ -0.07
SYVN1-214ENST00000532771 EID1Q9Y6B2 187 aa14.61□□□□□ -0.07
SYVN1-214ENST00000532771 ITGAEP38570 1179 aa14.59□□□□□ -0.07
SYVN1-214ENST00000532771 ADGRB3O60242 1522 aa14.59□□□□□ -0.07
SYVN1-214ENST00000532771 GCC2Q8IWJ2 1684 aa14.58□□□□□ -0.08
SYVN1-214ENST00000532771 STRCP1A6NGW2 1772 aa14.57□□□□□ -0.08
SYVN1-214ENST00000532771 LRRC7Q96NW7 1537 aa14.57□□□□□ -0.08
SYVN1-214ENST00000532771 TOM1O60784 492 aa14.57□□□□□ -0.08
SYVN1-214ENST00000532771 RRBP1Q9P2E9 1410 aaKnown RBP14.57□□□□□ -0.08
SYVN1-214ENST00000532771 IQGAP3Q86VI3 1631 aa14.56□□□□□ -0.08
SYVN1-214ENST00000532771 NUP155O75694 1391 aa14.55□□□□□ -0.08
SYVN1-214ENST00000532771 E9PCH4 1651 aa14.54□□□□□ -0.08
SYVN1-214ENST00000532771 ALKQ9UM73 1620 aa14.53□□□□□ -0.08
SYVN1-214ENST00000532771 PIP4K2BP78356 416 aa14.53□□□□□ -0.08
SYVN1-214ENST00000532771 ZFYVE9O95405 1425 aa14.52□□□□□ -0.08
SYVN1-214ENST00000532771 DISP3Q9P2K9 1392 aa14.52□□□□□ -0.08
SYVN1-214ENST00000532771 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.08
SYVN1-214ENST00000532771 TMEM131LA2VDJ0 1609 aa14.52□□□□□ -0.09
SYVN1-214ENST00000532771 RIMS2Q9UQ26 1411 aa14.49□□□□□ -0.09
SYVN1-214ENST00000532771 KCNA6P17658 529 aa14.49□□□□□ -0.09
SYVN1-214ENST00000532771 HSPA1LP34931 641 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms