RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 EHBP1L1Q8N3D4 1523 aa20.51■□□□□ 0.87
AP004550.1-201ENST00000532652 RTEL1-TNFRSF6BF6WH68 1400 aa20.5■□□□□ 0.87
AP004550.1-201ENST00000532652 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
AP004550.1-201ENST00000532652 SHANK2Q9UPX8 1470 aa20.49■□□□□ 0.87
AP004550.1-201ENST00000532652 KDM5DQ9BY66 1539 aa20.48■□□□□ 0.87
AP004550.1-201ENST00000532652 DHX29Q7Z478 1369 aaKnown RBP20.48■□□□□ 0.87
AP004550.1-201ENST00000532652 TNRQ92752 1358 aa20.48■□□□□ 0.87
AP004550.1-201ENST00000532652 HSPA1LP34931 641 aa20.48■□□□□ 0.87
AP004550.1-201ENST00000532652 STRCP1A6NGW2 1772 aa20.48■□□□□ 0.87
AP004550.1-201ENST00000532652 PZPP20742 1482 aa20.48■□□□□ 0.87
AP004550.1-201ENST00000532652 PIP4K2BP78356 416 aa20.47■□□□□ 0.87
AP004550.1-201ENST00000532652 FAM135AQ9P2D6 1515 aa20.47■□□□□ 0.87
AP004550.1-201ENST00000532652 VWDEQ8N2E2 1590 aa20.46■□□□□ 0.87
AP004550.1-201ENST00000532652 FBXO31Q5XUX0 539 aaPredicted RBP20.46■□□□□ 0.87
AP004550.1-201ENST00000532652 DEPDC5O75140 1603 aa20.45■□□□□ 0.87
AP004550.1-201ENST00000532652 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
AP004550.1-201ENST00000532652 TOM1O60784 492 aa20.45■□□□□ 0.86
AP004550.1-201ENST00000532652 KIF3BO15066 747 aa20.44■□□□□ 0.86
AP004550.1-201ENST00000532652 ALKQ9UM73 1620 aa20.43■□□□□ 0.86
AP004550.1-201ENST00000532652 CEP162Q5TB80 1403 aa20.43■□□□□ 0.86
AP004550.1-201ENST00000532652 CCDC141Q6ZP82 1450 aa20.43■□□□□ 0.86
AP004550.1-201ENST00000532652 UGGT1Q9NYU2 1555 aa20.42■□□□□ 0.86
AP004550.1-201ENST00000532652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.41■□□□□ 0.86
AP004550.1-201ENST00000532652 CAMSAP2Q08AD1 1489 aa20.41■□□□□ 0.86
AP004550.1-201ENST00000532652 NLRP1Q9C000 1473 aa20.39■□□□□ 0.85
AP004550.1-201ENST00000532652 ANKLE2Q86XL3 938 aa20.39■□□□□ 0.85
AP004550.1-201ENST00000532652 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
AP004550.1-201ENST00000532652 MED14O60244 1454 aa20.38■□□□□ 0.85
AP004550.1-201ENST00000532652 WASHC2CQ9Y4E1 1318 aa20.38■□□□□ 0.85
AP004550.1-201ENST00000532652 CEP152O94986 1710 aa20.38■□□□□ 0.85
AP004550.1-201ENST00000532652 NPHP4O75161 1426 aaPredicted RBP20.37■□□□□ 0.85
AP004550.1-201ENST00000532652 MIA2Q96PC5 1412 aa20.37■□□□□ 0.85
AP004550.1-201ENST00000532652 THEMISQ8N1K5 641 aaPredicted RBP20.37■□□□□ 0.85
AP004550.1-201ENST00000532652 RNF17Q9BXT8 1623 aaKnown RBP20.37■□□□□ 0.85
AP004550.1-201ENST00000532652 ARHGEF5Q12774 1597 aa20.37■□□□□ 0.85
AP004550.1-201ENST00000532652 XIRP1Q702N8 1843 aaKnown RBP20.37■□□□□ 0.85
AP004550.1-201ENST00000532652 NCOA2Q15596 1464 aa20.36■□□□□ 0.85
AP004550.1-201ENST00000532652 SYNMO15061 1565 aa20.34■□□□□ 0.85
AP004550.1-201ENST00000532652 UBR1Q8IWV7 1749 aa20.34■□□□□ 0.85
AP004550.1-201ENST00000532652 RSPH4AQ5TD94 716 aa20.33■□□□□ 0.85
AP004550.1-201ENST00000532652 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
AP004550.1-201ENST00000532652 ABCC3O15438 1527 aa20.31■□□□□ 0.84
AP004550.1-201ENST00000532652 EIF2AK4Q9P2K8 1649 aaKnown RBP20.31■□□□□ 0.84
AP004550.1-201ENST00000532652 LRRC7Q96NW7 1537 aa20.3■□□□□ 0.84
AP004550.1-201ENST00000532652 MAST1Q9Y2H9 1570 aa20.29■□□□□ 0.84
AP004550.1-201ENST00000532652 MROH1Q8NDA8 1641 aa20.27■□□□□ 0.84
AP004550.1-201ENST00000532652 TSPY4P0CV99 314 aa20.26■□□□□ 0.83
AP004550.1-201ENST00000532652 TSPY10P0CW01 314 aa20.26■□□□□ 0.83
AP004550.1-201ENST00000532652 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
AP004550.1-201ENST00000532652 ERVK-7P63135 1459 aa20.25■□□□□ 0.83
AP004550.1-201ENST00000532652 SCAF11Q99590 1463 aaKnown RBP20.19■□□□□ 0.82
AP004550.1-201ENST00000532652 SLIT1O75093 1534 aa20.17■□□□□ 0.82
AP004550.1-201ENST00000532652 PIK3C2BO00750 1634 aa20.16■□□□□ 0.82
AP004550.1-201ENST00000532652 CROCC2H7BZ55 1655 aa20.16■□□□□ 0.82
AP004550.1-201ENST00000532652 LRRC9Q6ZRR7 1453 aa20.16■□□□□ 0.82
AP004550.1-201ENST00000532652 ARHGAP23Q9P227 1491 aa20.15■□□□□ 0.82
AP004550.1-201ENST00000532652 DUOX2Q9NRD8 1548 aa20.14■□□□□ 0.81
AP004550.1-201ENST00000532652 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
AP004550.1-201ENST00000532652 LTKP29376 864 aa20.12■□□□□ 0.81
AP004550.1-201ENST00000532652 KDM5AP29375 1690 aaKnown RBP20.12■□□□□ 0.81
AP004550.1-201ENST00000532652 TXNDC2Q86VQ3 553 aa20.11■□□□□ 0.81
AP004550.1-201ENST00000532652 RGS17Q9UGC6 210 aaPredicted RBP20.11■□□□□ 0.81
AP004550.1-201ENST00000532652 MYO5BQ9ULV0 1848 aa20.1■□□□□ 0.81
AP004550.1-201ENST00000532652 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
AP004550.1-201ENST00000532652 ARHGAP31Q2M1Z3 1444 aa20.09■□□□□ 0.81
AP004550.1-201ENST00000532652 MYOM3Q5VTT5 1437 aa20.07■□□□□ 0.8
AP004550.1-201ENST00000532652 VPS8Q8N3P4 1428 aa20.06■□□□□ 0.8
AP004550.1-201ENST00000532652 EID1Q9Y6B2 187 aa20.05■□□□□ 0.8
AP004550.1-201ENST00000532652 FAM135BQ49AJ0 1406 aa20.04■□□□□ 0.8
AP004550.1-201ENST00000532652 KIF15Q9NS87 1388 aa20.04■□□□□ 0.8
AP004550.1-201ENST00000532652 SETD1AO15047 1707 aaKnown RBP20.04■□□□□ 0.8
AP004550.1-201ENST00000532652 ERBINQ96RT1 1412 aa20.03■□□□□ 0.8
AP004550.1-201ENST00000532652 MAP3K1Q13233 1512 aa20.03■□□□□ 0.8
AP004550.1-201ENST00000532652 EFCAB6Q5THR3 1501 aa20.02■□□□□ 0.8
AP004550.1-201ENST00000532652 PTPN23Q9H3S7 1636 aa20.02■□□□□ 0.8
AP004550.1-201ENST00000532652 CHD2O14647 1828 aaKnown RBP20.02■□□□□ 0.8
AP004550.1-201ENST00000532652 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.8
AP004550.1-201ENST00000532652 TMEM2Q9UHN6 1383 aa20.02■□□□□ 0.8
AP004550.1-201ENST00000532652 PHLPP1O60346 1717 aa20.02■□□□□ 0.79
AP004550.1-201ENST00000532652 TET3O43151 1660 aa20.01■□□□□ 0.79
AP004550.1-201ENST00000532652 TMEM94Q12767 1356 aa20■□□□□ 0.79
AP004550.1-201ENST00000532652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.79
AP004550.1-201ENST00000532652 STAG3Q9UJ98 1225 aa19.99■□□□□ 0.79
AP004550.1-201ENST00000532652 POTEAQ6S8J7 498 aa19.98■□□□□ 0.79
AP004550.1-201ENST00000532652 RRP7BPQ9NSQ0 103 aa19.98■□□□□ 0.79
AP004550.1-201ENST00000532652 ABCC5O15440 1437 aa19.98■□□□□ 0.79
AP004550.1-201ENST00000532652 NWD1Q149M9 1564 aa19.98■□□□□ 0.79
AP004550.1-201ENST00000532652 KCNA6P17658 529 aa19.96■□□□□ 0.79
AP004550.1-201ENST00000532652 LMTK2Q8IWU2 1503 aa19.96■□□□□ 0.79
AP004550.1-201ENST00000532652 KANK1Q14678 1352 aa19.95■□□□□ 0.79
AP004550.1-201ENST00000532652 ADGRB3O60242 1522 aa19.95■□□□□ 0.78
AP004550.1-201ENST00000532652 GCC2Q8IWJ2 1684 aa19.94■□□□□ 0.78
AP004550.1-201ENST00000532652 IDI1Q13907 227 aa19.94■□□□□ 0.78
AP004550.1-201ENST00000532652 RBM33Q96EV2 1170 aaKnown RBP19.94■□□□□ 0.78
AP004550.1-201ENST00000532652 SLC26A8Q96RN1 970 aa19.94■□□□□ 0.78
AP004550.1-201ENST00000532652 PROSER2Q86WR7 435 aaPredicted RBP19.93■□□□□ 0.78
AP004550.1-201ENST00000532652 DAPK1P53355 1430 aa19.93■□□□□ 0.78
AP004550.1-201ENST00000532652 NKTRP30414 1462 aaKnown RBP19.92■□□□□ 0.78
AP004550.1-201ENST00000532652 NOS1P29475 1434 aa19.89■□□□□ 0.77
AP004550.1-201ENST00000532652 COL16A1Q07092 1604 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms