RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 CLTCQ00610 1675 aaKnown RBP22.24■■□□□ 1.15
CTSB-224ENST00000532392 WASHC2CQ9Y4E1 1318 aa22.24■■□□□ 1.15
CTSB-224ENST00000532392 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.24■■□□□ 1.152e-6■■□□□ 11.9
CTSB-224ENST00000532392 EIF2AK4Q9P2K8 1649 aaKnown RBP22.23■■□□□ 1.15
CTSB-224ENST00000532392 ERBINQ96RT1 1412 aa22.23■■□□□ 1.15
CTSB-224ENST00000532392 ADGRL2O95490 1459 aa22.22■■□□□ 1.15
CTSB-224ENST00000532392 SETD1BQ9UPS6 1966 aaKnown RBP22.22■■□□□ 1.15
CTSB-224ENST00000532392 FAM135AQ9P2D6 1515 aa22.21■■□□□ 1.15
CTSB-224ENST00000532392 NPATQ14207 1427 aa22.21■■□□□ 1.15
CTSB-224ENST00000532392 PTPRKQ15262 1439 aa22.2■■□□□ 1.14
CTSB-224ENST00000532392 KDM5DQ9BY66 1539 aa22.2■■□□□ 1.14
CTSB-224ENST00000532392 RNF17Q9BXT8 1623 aaKnown RBP22.2■■□□□ 1.14
CTSB-224ENST00000532392 HSPA2P54652 639 aa22.19■■□□□ 1.14
CTSB-224ENST00000532392 UHRF1BP1Q6BDS2 1440 aa22.19■■□□□ 1.14
CTSB-224ENST00000532392 PREX1Q8TCU6 1659 aa22.17■■□□□ 1.14
CTSB-224ENST00000532392 RRBP1Q9P2E9 1410 aaKnown RBP22.17■■□□□ 1.14
CTSB-224ENST00000532392 ITGAEP38570 1179 aa22.16■■□□□ 1.14
CTSB-224ENST00000532392 ROCK1Q13464 1354 aa22.14■■□□□ 1.14
CTSB-224ENST00000532392 MROH1Q8NDA8 1641 aa22.14■■□□□ 1.14
CTSB-224ENST00000532392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.13■■□□□ 1.13
CTSB-224ENST00000532392 ABCC3O15438 1527 aa22.12■■□□□ 1.13
CTSB-224ENST00000532392 FBXO31Q5XUX0 539 aaPredicted RBP22.12■■□□□ 1.13
CTSB-224ENST00000532392 ANKRD50Q9ULJ7 1429 aa22.12■■□□□ 1.13
CTSB-224ENST00000532392 PZPP20742 1482 aa22.11■■□□□ 1.13
CTSB-224ENST00000532392 PRDM15P57071 1507 aaPredicted RBP22.1■■□□□ 1.13
CTSB-224ENST00000532392 ZC3H13Q5T200 1668 aaKnown RBP22.09■■□□□ 1.13
CTSB-224ENST00000532392 KANK1Q14678 1352 aa22.09■■□□□ 1.13
CTSB-224ENST00000532392 DEPDC5O75140 1603 aa22.07■■□□□ 1.12
CTSB-224ENST00000532392 TNRQ92752 1358 aa22.06■■□□□ 1.12
CTSB-224ENST00000532392 CEP152O94986 1710 aa22.03■■□□□ 1.12
CTSB-224ENST00000532392 ARHGAP31Q2M1Z3 1444 aa22.02■■□□□ 1.12
CTSB-224ENST00000532392 MYO3AQ8NEV4 1616 aa22.02■■□□□ 1.11
CTSB-224ENST00000532392 VWDEQ8N2E2 1590 aa22.01■■□□□ 1.11
CTSB-224ENST00000532392 CAMSAP1Q5T5Y3 1602 aa22.01■■□□□ 1.11
CTSB-224ENST00000532392 LMTK2Q8IWU2 1503 aa22■■□□□ 1.11
CTSB-224ENST00000532392 CEP170BQ9Y4F5 1589 aaPredicted RBP21.99■■□□□ 1.11
CTSB-224ENST00000532392 A2ML1A8K2U0 1454 aa21.98■■□□□ 1.11
CTSB-224ENST00000532392 ERVK-7P63135 1459 aa21.98■■□□□ 1.11
CTSB-224ENST00000532392 SPATA31D1Q6ZQQ2 1576 aa21.98■■□□□ 1.11
CTSB-224ENST00000532392 ZNF142P52746 1687 aaPredicted RBP21.98■■□□□ 1.11
CTSB-224ENST00000532392 NLRP1Q9C000 1473 aa21.96■■□□□ 1.11
CTSB-224ENST00000532392 DMRT2Q9Y5R5 561 aa21.96■■□□□ 1.11
CTSB-224ENST00000532392 STRCQ7RTU9 1775 aa21.94■■□□□ 1.1
CTSB-224ENST00000532392 UNC13BO14795 1591 aa21.93■■□□□ 1.1
CTSB-224ENST00000532392 CFAP65Q6ZU64 1925 aaKnown RBP21.92■■□□□ 1.1
CTSB-224ENST00000532392 NAIPQ13075 1403 aa21.92■■□□□ 1.1
CTSB-224ENST00000532392 PLA2R1Q13018 1463 aa21.91■■□□□ 1.1
CTSB-224ENST00000532392 THEMISQ8N1K5 641 aaPredicted RBP21.91■■□□□ 1.1
CTSB-224ENST00000532392 EFCAB6Q5THR3 1501 aa21.9■■□□□ 1.1
CTSB-224ENST00000532392 NUP155O75694 1391 aa21.9■■□□□ 1.1
CTSB-224ENST00000532392 NCKAP5LQ9HCH0 1330 aa21.9■■□□□ 1.1
CTSB-224ENST00000532392 PKD2Q13563 968 aa21.89■■□□□ 1.09
CTSB-224ENST00000532392 UGGT1Q9NYU2 1555 aa21.89■■□□□ 1.09
CTSB-224ENST00000532392 HFM1A2PYH4 1435 aa21.89■■□□□ 1.09
CTSB-224ENST00000532392 PTPRTO14522 1441 aa21.89■■□□□ 1.09
CTSB-224ENST00000532392 RPRD2Q5VT52 1461 aaKnown RBP21.87■■□□□ 1.09
CTSB-224ENST00000532392 TET3O43151 1660 aa21.86■■□□□ 1.09
CTSB-224ENST00000532392 NOS1P29475 1434 aa21.86■■□□□ 1.09
CTSB-224ENST00000532392 IQGAP3Q86VI3 1631 aa21.84■■□□□ 1.09
CTSB-224ENST00000532392 GCC2Q8IWJ2 1684 aa21.83■■□□□ 1.09
CTSB-224ENST00000532392 IDI1Q13907 227 aa21.83■■□□□ 1.09
CTSB-224ENST00000532392 ANKLE2Q86XL3 938 aa21.83■■□□□ 1.09
CTSB-224ENST00000532392 SLC52A1Q9NWF4 448 aa21.82■■□□□ 1.08
CTSB-224ENST00000532392 SYNMO15061 1565 aa21.8■■□□□ 1.08
CTSB-224ENST00000532392 STAG3Q9UJ98 1225 aa21.79■■□□□ 1.08
CTSB-224ENST00000532392 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
CTSB-224ENST00000532392 E9PCH4 1651 aa21.77■■□□□ 1.08
CTSB-224ENST00000532392 UBR1Q8IWV7 1749 aa21.77■■□□□ 1.08
CTSB-224ENST00000532392 PIK3C2BO00750 1634 aa21.76■■□□□ 1.07
CTSB-224ENST00000532392 NEURL4Q96JN8 1562 aa21.73■■□□□ 1.07
CTSB-224ENST00000532392 POLR1AO95602 1720 aaPredicted RBP21.72■■□□□ 1.07
CTSB-224ENST00000532392 MED14O60244 1454 aa21.72■■□□□ 1.07
CTSB-224ENST00000532392 SLIT1O75093 1534 aa21.72■■□□□ 1.07
CTSB-224ENST00000532392 TXNDC2Q86VQ3 553 aa21.72■■□□□ 1.07
CTSB-224ENST00000532392 TMEM2Q9UHN6 1383 aa21.72■■□□□ 1.07
CTSB-224ENST00000532392 ARHGAP23Q9P227 1491 aa21.71■■□□□ 1.07
CTSB-224ENST00000532392 CERKQ8TCT0 537 aa21.71■■□□□ 1.07
CTSB-224ENST00000532392 EID1Q9Y6B2 187 aa21.71■■□□□ 1.07
CTSB-224ENST00000532392 KDM5AP29375 1690 aaKnown RBP21.71■■□□□ 1.07
CTSB-224ENST00000532392 NPHP4O75161 1426 aaPredicted RBP21.71■■□□□ 1.07
CTSB-224ENST00000532392 LTKP29376 864 aa21.7■■□□□ 1.06
CTSB-224ENST00000532392 SLC4A1APQ9BWU0 796 aaKnown RBP21.69■■□□□ 1.06
CTSB-224ENST00000532392 SETD5Q9C0A6 1442 aa21.69■■□□□ 1.06
CTSB-224ENST00000532392 SCAF11Q99590 1463 aaKnown RBP21.69■■□□□ 1.06
CTSB-224ENST00000532392 ADGRB3O60242 1522 aa21.69■■□□□ 1.06
CTSB-224ENST00000532392 ZNF335Q9H4Z2 1342 aaPredicted RBP21.68■■□□□ 1.06
CTSB-224ENST00000532392 ACIN1Q9UKV3 1341 aaKnown RBP21.67■■□□□ 1.06
CTSB-224ENST00000532392 CHGAP10645 457 aaKnown RBP21.66■■□□□ 1.06
CTSB-224ENST00000532392 LTBP4Q8N2S1 1624 aa21.65■■□□□ 1.06
CTSB-224ENST00000532392 ILDR1Q86SU0 546 aaPredicted RBP21.63■■□□□ 1.05
CTSB-224ENST00000532392 IQGAP1P46940 1657 aa21.63■■□□□ 1.05
CTSB-224ENST00000532392 TMEM131LA2VDJ0 1609 aa21.62■■□□□ 1.05
CTSB-224ENST00000532392 HDGFP51858 240 aaKnown RBP21.62■■□□□ 1.05
CTSB-224ENST00000532392 FBXO41Q8TF61 875 aa21.62■■□□□ 1.05
CTSB-224ENST00000532392 SPHKAPQ2M3C7 1700 aa21.62■■□□□ 1.05
CTSB-224ENST00000532392 MPHOSPH9Q99550 1183 aa21.61■■□□□ 1.05
CTSB-224ENST00000532392 RAB3GAP2Q9H2M9 1393 aa21.61■■□□□ 1.05
CTSB-224ENST00000532392 ZFYVE9O95405 1425 aa21.58■■□□□ 1.05
CTSB-224ENST00000532392 RIMS2Q9UQ26 1411 aa21.58■■□□□ 1.05
CTSB-224ENST00000532392 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms