RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 NPATQ14207 1427 aa35.48■■■■□ 3.27
CAPN1-222ENST00000532285 RNF17Q9BXT8 1623 aaKnown RBP35.46■■■■□ 3.27
CAPN1-222ENST00000532285 FAM50AQ14320 339 aaKnown RBP35.46■■■■□ 3.27
CAPN1-222ENST00000532285 KDM5DQ9BY66 1539 aa35.44■■■■□ 3.26
CAPN1-222ENST00000532285 KIF15Q9NS87 1388 aa35.44■■■■□ 3.26
CAPN1-222ENST00000532285 WASHC2CQ9Y4E1 1318 aa35.41■■■■□ 3.26
CAPN1-222ENST00000532285 RRP7BPQ9NSQ0 103 aa35.41■■■■□ 3.26
CAPN1-222ENST00000532285 PPARGC1BQ86YN6 1023 aaKnown RBP35.4■■■■□ 3.26
CAPN1-222ENST00000532285 ANKRD30AQ9BXX3 1397 aa35.39■■■■□ 3.26
CAPN1-222ENST00000532285 CHIC2Q9UKJ5 165 aa35.39■■■■□ 3.26
CAPN1-222ENST00000532285 PTPRKQ15262 1439 aa35.38■■■■□ 3.25
CAPN1-222ENST00000532285 ERBINQ96RT1 1412 aa35.37■■■■□ 3.25
CAPN1-222ENST00000532285 ZC3H13Q5T200 1668 aaKnown RBP35.34■■■■□ 3.25
CAPN1-222ENST00000532285 NCOA1Q15788 1441 aa35.33■■■■□ 3.25
CAPN1-222ENST00000532285 MROH1Q8NDA8 1641 aa35.32■■■■□ 3.25
CAPN1-222ENST00000532285 ADGRL2O95490 1459 aa35.32■■■■□ 3.24
CAPN1-222ENST00000532285 PZPP20742 1482 aa35.29■■■■□ 3.24
CAPN1-222ENST00000532285 MYO3AQ8NEV4 1616 aa35.28■■■■□ 3.24
CAPN1-222ENST00000532285 ABCC3O15438 1527 aa35.28■■■■□ 3.24
CAPN1-222ENST00000532285 ZNF142P52746 1687 aaPredicted RBP35.26■■■■□ 3.23
CAPN1-222ENST00000532285 CEP152O94986 1710 aa35.26■■■■□ 3.23
CAPN1-222ENST00000532285 STRCQ7RTU9 1775 aa35.25■■■■□ 3.23
CAPN1-222ENST00000532285 DEPDC5O75140 1603 aa35.24■■■■□ 3.23
CAPN1-222ENST00000532285 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.24■■■■□ 3.23
CAPN1-222ENST00000532285 PRDM15P57071 1507 aaPredicted RBP35.23■■■■□ 3.23
CAPN1-222ENST00000532285 FBXO31Q5XUX0 539 aaPredicted RBP35.21■■■■□ 3.23
CAPN1-222ENST00000532285 CEP170BQ9Y4F5 1589 aaPredicted RBP35.2■■■■□ 3.23
CAPN1-222ENST00000532285 CAMSAP1Q5T5Y3 1602 aa35.19■■■■□ 3.22
CAPN1-222ENST00000532285 TNRQ92752 1358 aa35.18■■■■□ 3.22
CAPN1-222ENST00000532285 KANK1Q14678 1352 aa35.15■■■■□ 3.22
CAPN1-222ENST00000532285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.15■■■■□ 3.22
CAPN1-222ENST00000532285 DMRT2Q9Y5R5 561 aa35.15■■■■□ 3.22
CAPN1-222ENST00000532285 CFAP65Q6ZU64 1925 aaKnown RBP35.14■■■■□ 3.22
CAPN1-222ENST00000532285 A2ML1A8K2U0 1454 aa35.13■■■■□ 3.21
CAPN1-222ENST00000532285 ANKRD50Q9ULJ7 1429 aa35.13■■■■□ 3.21
CAPN1-222ENST00000532285 ROCK1Q13464 1354 aa35.13■■■■□ 3.21
CAPN1-222ENST00000532285 RRBP1Q9P2E9 1410 aaKnown RBP35.1■■■■□ 3.21
CAPN1-222ENST00000532285 SPATA31D1Q6ZQQ2 1576 aa35.09■■■■□ 3.21
CAPN1-222ENST00000532285 ITGAEP38570 1179 aa35.08■■■■□ 3.21
CAPN1-222ENST00000532285 VWDEQ8N2E2 1590 aa35.08■■■■□ 3.21
CAPN1-222ENST00000532285 ARHGAP31Q2M1Z3 1444 aa35.06■■■■□ 3.2
CAPN1-222ENST00000532285 NLRP1Q9C000 1473 aa35.06■■■■□ 3.2
CAPN1-222ENST00000532285 ERVK-7P63135 1459 aa35.05■■■■□ 3.2
CAPN1-222ENST00000532285 PLA2R1Q13018 1463 aa35.04■■■■□ 3.2
CAPN1-222ENST00000532285 LMTK2Q8IWU2 1503 aa35.04■■■■□ 3.2
CAPN1-222ENST00000532285 PTPRTO14522 1441 aa35.03■■■■□ 3.2
CAPN1-222ENST00000532285 PKD2Q13563 968 aa34.97■■■■□ 3.19
CAPN1-222ENST00000532285 UGGT1Q9NYU2 1555 aa34.96■■■■□ 3.19
CAPN1-222ENST00000532285 NCKAP5LQ9HCH0 1330 aa34.96■■■■□ 3.19
CAPN1-222ENST00000532285 UNC13BO14795 1591 aa34.96■■■■□ 3.19
CAPN1-222ENST00000532285 THEMISQ8N1K5 641 aaPredicted RBP34.94■■■■□ 3.18
CAPN1-222ENST00000532285 EFCAB6Q5THR3 1501 aa34.93■■■■□ 3.18
CAPN1-222ENST00000532285 POLR1AO95602 1720 aaPredicted RBP34.91■■■■□ 3.18
CAPN1-222ENST00000532285 TET3O43151 1660 aa34.89■■■■□ 3.18
CAPN1-222ENST00000532285 GCC2Q8IWJ2 1684 aa34.87■■■■□ 3.17
CAPN1-222ENST00000532285 UBR1Q8IWV7 1749 aa34.86■■■■□ 3.17
CAPN1-222ENST00000532285 RPRD2Q5VT52 1461 aaKnown RBP34.84■■■■□ 3.17
CAPN1-222ENST00000532285 ILDR1Q86SU0 546 aaPredicted RBP34.83■■■■□ 3.17
CAPN1-222ENST00000532285 IQGAP3Q86VI3 1631 aa34.83■■■■□ 3.17
CAPN1-222ENST00000532285 ANKLE2Q86XL3 938 aa34.82■■■■□ 3.16
CAPN1-222ENST00000532285 NOS1P29475 1434 aa34.8■■■■□ 3.16
CAPN1-222ENST00000532285 CERKQ8TCT0 537 aa34.79■■■■□ 3.16
CAPN1-222ENST00000532285 SYNMO15061 1565 aa34.79■■■■□ 3.16
CAPN1-222ENST00000532285 PIK3C2BO00750 1634 aa34.78■■■■□ 3.16
CAPN1-222ENST00000532285 NEURL4Q96JN8 1562 aa34.78■■■■□ 3.16
CAPN1-222ENST00000532285 NUP155O75694 1391 aa34.76■■■■□ 3.16
CAPN1-222ENST00000532285 KDM5AP29375 1690 aaKnown RBP34.76■■■■□ 3.15
CAPN1-222ENST00000532285 FBXO41Q8TF61 875 aa34.75■■■■□ 3.15
CAPN1-222ENST00000532285 NAIPQ13075 1403 aa34.74■■■■□ 3.15
CAPN1-222ENST00000532285 E9PCH4 1651 aa34.74■■■■□ 3.15
CAPN1-222ENST00000532285 IDI1Q13907 227 aa34.72■■■■□ 3.15
CAPN1-222ENST00000532285 LTBP4Q8N2S1 1624 aa34.71■■■■□ 3.15
CAPN1-222ENST00000532285 MED14O60244 1454 aa34.71■■■■□ 3.15
CAPN1-222ENST00000532285 SLC52A1Q9NWF4 448 aa34.7■■■■□ 3.15
CAPN1-222ENST00000532285 STAG3Q9UJ98 1225 aa34.69■■■■□ 3.14
CAPN1-222ENST00000532285 HFM1A2PYH4 1435 aa34.68■■■■□ 3.14
CAPN1-222ENST00000532285 SLIT1O75093 1534 aa34.68■■■■□ 3.14
CAPN1-222ENST00000532285 IQGAP1P46940 1657 aa34.66■■■■□ 3.14
CAPN1-222ENST00000532285 ARHGAP23Q9P227 1491 aa34.66■■■■□ 3.14
CAPN1-222ENST00000532285 NPHP4O75161 1426 aaPredicted RBP34.66■■■■□ 3.14
CAPN1-222ENST00000532285 ZNF335Q9H4Z2 1342 aaPredicted RBP34.64■■■■□ 3.14
CAPN1-222ENST00000532285 ADGRB3O60242 1522 aa34.62■■■■□ 3.13
CAPN1-222ENST00000532285 SCAF11Q99590 1463 aaKnown RBP34.61■■■■□ 3.13
CAPN1-222ENST00000532285 EID1Q9Y6B2 187 aa34.6■■■■□ 3.13
CAPN1-222ENST00000532285 TMEM2Q9UHN6 1383 aa34.6■■■■□ 3.13
CAPN1-222ENST00000532285 TXNDC2Q86VQ3 553 aa34.59■■■■□ 3.13
CAPN1-222ENST00000532285 LTKP29376 864 aa34.57■■■■□ 3.12
CAPN1-222ENST00000532285 MYO5BQ9ULV0 1848 aa34.57■■■■□ 3.12
CAPN1-222ENST00000532285 IQSEC2Q5JU85 1478 aa34.55■■■■□ 3.12
CAPN1-222ENST00000532285 SPHKAPQ2M3C7 1700 aa34.52■■■■□ 3.12
CAPN1-222ENST00000532285 TMEM131LA2VDJ0 1609 aa34.52■■■■□ 3.12
CAPN1-222ENST00000532285 TRIM52Q96A61 297 aa34.5■■■■□ 3.11
CAPN1-222ENST00000532285 CPS1P31327 1500 aa34.46■■■■□ 3.11
CAPN1-222ENST00000532285 CHGAP10645 457 aaKnown RBP34.43■■■■□ 3.1
CAPN1-222ENST00000532285 HDGFP51858 240 aaKnown RBP34.41■■■■□ 3.1
CAPN1-222ENST00000532285 ZFYVE9O95405 1425 aa34.39■■■■□ 3.1
CAPN1-222ENST00000532285 STRCP1A6NGW2 1772 aa34.39■■■■□ 3.1
CAPN1-222ENST00000532285 RIMS2Q9UQ26 1411 aa34.38■■■■□ 3.09
CAPN1-222ENST00000532285 SLC4A1APQ9BWU0 796 aaKnown RBP34.37■■■■□ 3.09
CAPN1-222ENST00000532285 TRPM2O94759 1503 aa34.35■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms