RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 PTPRTO14522 1441 aa14.07□□□□□ -0.16
NECTIN1-207ENST00000532197 ABCC5O15440 1437 aa14.07□□□□□ -0.16
NECTIN1-207ENST00000532197 DAPK1P53355 1430 aa14.07□□□□□ -0.16
NECTIN1-207ENST00000532197 DUOX2Q9NRD8 1548 aa14.06□□□□□ -0.16
NECTIN1-207ENST00000532197 ZMYM3Q14202 1370 aa14.05□□□□□ -0.16
NECTIN1-207ENST00000532197 ZC3H13Q5T200 1668 aaKnown RBP14.04□□□□□ -0.16
NECTIN1-207ENST00000532197 STRCQ7RTU9 1775 aa14.04□□□□□ -0.16
NECTIN1-207ENST00000532197 KDM5DQ9BY66 1539 aa14.02□□□□□ -0.16
NECTIN1-207ENST00000532197 KIF3BO15066 747 aa14.02□□□□□ -0.17
NECTIN1-207ENST00000532197 GGT6Q6P531 493 aa14.02□□□□□ -0.17
NECTIN1-207ENST00000532197 ADGRL2O95490 1459 aa14.01□□□□□ -0.17
NECTIN1-207ENST00000532197 NCOA1Q15788 1441 aa14.01□□□□□ -0.17
NECTIN1-207ENST00000532197 ERBINQ96RT1 1412 aa14.01□□□□□ -0.17
NECTIN1-207ENST00000532197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.01□□□□□ -0.17
NECTIN1-207ENST00000532197 KIF15Q9NS87 1388 aa14.01□□□□□ -0.17
NECTIN1-207ENST00000532197 ANKRD30AQ9BXX3 1397 aa14□□□□□ -0.17
NECTIN1-207ENST00000532197 DEPDC5O75140 1603 aa14□□□□□ -0.17
NECTIN1-207ENST00000532197 MROH1Q8NDA8 1641 aa13.99□□□□□ -0.17
NECTIN1-207ENST00000532197 FAM50AQ14320 339 aaKnown RBP13.98□□□□□ -0.17
NECTIN1-207ENST00000532197 PLA2R1Q13018 1463 aa13.98□□□□□ -0.17
NECTIN1-207ENST00000532197 IQSEC2Q5JU85 1478 aa13.98□□□□□ -0.17
NECTIN1-207ENST00000532197 PTPRKQ15262 1439 aa13.98□□□□□ -0.17
NECTIN1-207ENST00000532197 ZNF142P52746 1687 aaPredicted RBP13.98□□□□□ -0.17
NECTIN1-207ENST00000532197 PRDM15P57071 1507 aaPredicted RBP13.97□□□□□ -0.17
NECTIN1-207ENST00000532197 PKD2Q13563 968 aa13.96□□□□□ -0.17
NECTIN1-207ENST00000532197 CEP152O94986 1710 aa13.95□□□□□ -0.18
NECTIN1-207ENST00000532197 ABCC3O15438 1527 aa13.95□□□□□ -0.18
NECTIN1-207ENST00000532197 WASHC2CQ9Y4E1 1318 aa13.95□□□□□ -0.18
NECTIN1-207ENST00000532197 PZPP20742 1482 aa13.95□□□□□ -0.18
NECTIN1-207ENST00000532197 MYO3AQ8NEV4 1616 aa13.95□□□□□ -0.18
NECTIN1-207ENST00000532197 CAMSAP1Q5T5Y3 1602 aa13.94□□□□□ -0.18
NECTIN1-207ENST00000532197 RRP7BPQ9NSQ0 103 aa13.94□□□□□ -0.18
NECTIN1-207ENST00000532197 ROCK1Q13464 1354 aa13.93□□□□□ -0.18
NECTIN1-207ENST00000532197 LTBP4Q8N2S1 1624 aa13.93□□□□□ -0.18
NECTIN1-207ENST00000532197 RRBP1Q9P2E9 1410 aaKnown RBP13.92□□□□□ -0.18
NECTIN1-207ENST00000532197 CHIC2Q9UKJ5 165 aa13.92□□□□□ -0.18
NECTIN1-207ENST00000532197 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
NECTIN1-207ENST00000532197 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
NECTIN1-207ENST00000532197 KANK1Q14678 1352 aa13.9□□□□□ -0.18
NECTIN1-207ENST00000532197 A2ML1A8K2U0 1454 aa13.9□□□□□ -0.18
NECTIN1-207ENST00000532197 CFAP65Q6ZU64 1925 aaKnown RBP13.9□□□□□ -0.18
NECTIN1-207ENST00000532197 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.19
NECTIN1-207ENST00000532197 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.19
NECTIN1-207ENST00000532197 PPARGC1BQ86YN6 1023 aaKnown RBP13.89□□□□□ -0.19
NECTIN1-207ENST00000532197 LMTK2Q8IWU2 1503 aa13.89□□□□□ -0.19
NECTIN1-207ENST00000532197 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
NECTIN1-207ENST00000532197 UNC13BO14795 1591 aa13.88□□□□□ -0.19
NECTIN1-207ENST00000532197 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
NECTIN1-207ENST00000532197 TNRQ92752 1358 aa13.87□□□□□ -0.19
NECTIN1-207ENST00000532197 NCKAP5LQ9HCH0 1330 aa13.87□□□□□ -0.19
NECTIN1-207ENST00000532197 GCC2Q8IWJ2 1684 aa13.85□□□□□ -0.19
NECTIN1-207ENST00000532197 FBXO31Q5XUX0 539 aaPredicted RBP13.85□□□□□ -0.19
NECTIN1-207ENST00000532197 ERVK-7P63135 1459 aa13.85□□□□□ -0.19
NECTIN1-207ENST00000532197 TET3O43151 1660 aa13.85□□□□□ -0.19
NECTIN1-207ENST00000532197 EFCAB6Q5THR3 1501 aa13.85□□□□□ -0.19
NECTIN1-207ENST00000532197 KDM5AP29375 1690 aaKnown RBP13.83□□□□□ -0.2
NECTIN1-207ENST00000532197 POLR1AO95602 1720 aaPredicted RBP13.83□□□□□ -0.2
NECTIN1-207ENST00000532197 IQGAP3Q86VI3 1631 aa13.82□□□□□ -0.2
NECTIN1-207ENST00000532197 RPRD2Q5VT52 1461 aaKnown RBP13.82□□□□□ -0.2
NECTIN1-207ENST00000532197 THEMISQ8N1K5 641 aaPredicted RBP13.82□□□□□ -0.2
NECTIN1-207ENST00000532197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.2
NECTIN1-207ENST00000532197 ZNF335Q9H4Z2 1342 aaPredicted RBP13.82□□□□□ -0.2
NECTIN1-207ENST00000532197 UGGT1Q9NYU2 1555 aa13.81□□□□□ -0.2
NECTIN1-207ENST00000532197 UBR1Q8IWV7 1749 aa13.8□□□□□ -0.2
NECTIN1-207ENST00000532197 ITGAEP38570 1179 aa13.79□□□□□ -0.2
NECTIN1-207ENST00000532197 ANKLE2Q86XL3 938 aa13.79□□□□□ -0.2
NECTIN1-207ENST00000532197 MED14O60244 1454 aa13.79□□□□□ -0.2
NECTIN1-207ENST00000532197 CPS1P31327 1500 aa13.78□□□□□ -0.2
NECTIN1-207ENST00000532197 NEURL4Q96JN8 1562 aa13.77□□□□□ -0.21
NECTIN1-207ENST00000532197 E9PCH4 1651 aa13.76□□□□□ -0.21
NECTIN1-207ENST00000532197 SYNMO15061 1565 aa13.76□□□□□ -0.21
NECTIN1-207ENST00000532197 HFM1A2PYH4 1435 aa13.76□□□□□ -0.21
NECTIN1-207ENST00000532197 NOS1P29475 1434 aa13.76□□□□□ -0.21
NECTIN1-207ENST00000532197 NAIPQ13075 1403 aa13.76□□□□□ -0.21
NECTIN1-207ENST00000532197 PIK3C2BO00750 1634 aa13.75□□□□□ -0.21
NECTIN1-207ENST00000532197 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
NECTIN1-207ENST00000532197 NPHP4O75161 1426 aaPredicted RBP13.73□□□□□ -0.21
NECTIN1-207ENST00000532197 DISP3Q9P2K9 1392 aa13.73□□□□□ -0.21
NECTIN1-207ENST00000532197 SLIT1O75093 1534 aa13.73□□□□□ -0.21
NECTIN1-207ENST00000532197 NUP155O75694 1391 aa13.72□□□□□ -0.21
NECTIN1-207ENST00000532197 SLC52A1Q9NWF4 448 aa13.72□□□□□ -0.21
NECTIN1-207ENST00000532197 ARHGAP23Q9P227 1491 aa13.71□□□□□ -0.21
NECTIN1-207ENST00000532197 IQGAP1P46940 1657 aa13.71□□□□□ -0.21
NECTIN1-207ENST00000532197 SPHKAPQ2M3C7 1700 aa13.7□□□□□ -0.22
NECTIN1-207ENST00000532197 ADGRB3O60242 1522 aa13.7□□□□□ -0.22
NECTIN1-207ENST00000532197 TOM1O60784 492 aa13.7□□□□□ -0.22
NECTIN1-207ENST00000532197 MYO5BQ9ULV0 1848 aa13.69□□□□□ -0.22
NECTIN1-207ENST00000532197 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
NECTIN1-207ENST00000532197 IDI1Q13907 227 aa13.68□□□□□ -0.22
NECTIN1-207ENST00000532197 TMEM131LA2VDJ0 1609 aa13.68□□□□□ -0.22
NECTIN1-207ENST00000532197 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
NECTIN1-207ENST00000532197 TMEM2Q9UHN6 1383 aa13.66□□□□□ -0.22
NECTIN1-207ENST00000532197 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
NECTIN1-207ENST00000532197 EID1Q9Y6B2 187 aa13.65□□□□□ -0.22
NECTIN1-207ENST00000532197 SOCS7O14512 581 aa13.64□□□□□ -0.23
NECTIN1-207ENST00000532197 ILDR2Q71H61 639 aa13.63□□□□□ -0.23
NECTIN1-207ENST00000532197 KIF1BO60333 1816 aa13.62□□□□□ -0.23
NECTIN1-207ENST00000532197 TXNDC2Q86VQ3 553 aa13.62□□□□□ -0.23
NECTIN1-207ENST00000532197 TRPM2O94759 1503 aa13.62□□□□□ -0.23
NECTIN1-207ENST00000532197 LRRC7Q96NW7 1537 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms