RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 RNF17Q9BXT8 1623 aaKnown RBP17.8■□□□□ 0.44
PPFIA1-220ENST00000532024 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
PPFIA1-220ENST00000532024 GGT6Q6P531 493 aa17.79■□□□□ 0.44
PPFIA1-220ENST00000532024 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
PPFIA1-220ENST00000532024 CNTLNQ9NXG0 1405 aa17.79■□□□□ 0.44
PPFIA1-220ENST00000532024 MADDQ8WXG6 1647 aa17.79■□□□□ 0.44
PPFIA1-220ENST00000532024 KANK1Q14678 1352 aa17.78■□□□□ 0.44
PPFIA1-220ENST00000532024 PRDM15P57071 1507 aaPredicted RBP17.76■□□□□ 0.43
PPFIA1-220ENST00000532024 KDM5DQ9BY66 1539 aa17.76■□□□□ 0.43
PPFIA1-220ENST00000532024 DEPDC5O75140 1603 aa17.76■□□□□ 0.43
PPFIA1-220ENST00000532024 NAIPQ13075 1403 aa17.75■□□□□ 0.43
PPFIA1-220ENST00000532024 ZC3H13Q5T200 1668 aaKnown RBP17.75■□□□□ 0.43
PPFIA1-220ENST00000532024 RIMS1Q86UR5 1692 aaKnown RBP17.75■□□□□ 0.43
PPFIA1-220ENST00000532024 MROH2AA6NES4 1674 aa17.73■□□□□ 0.43
PPFIA1-220ENST00000532024 WASHC2CQ9Y4E1 1318 aa17.72■□□□□ 0.43
PPFIA1-220ENST00000532024 UNC13BO14795 1591 aa17.72■□□□□ 0.43
PPFIA1-220ENST00000532024 MROH1Q8NDA8 1641 aa17.72■□□□□ 0.43
PPFIA1-220ENST00000532024 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
PPFIA1-220ENST00000532024 CLTCQ00610 1675 aaKnown RBP17.71■□□□□ 0.43
PPFIA1-220ENST00000532024 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.43
PPFIA1-220ENST00000532024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■□□□□ 8.7
PPFIA1-220ENST00000532024 PTPRMP28827 1452 aa17.69■□□□□ 0.42
PPFIA1-220ENST00000532024 ABCC3O15438 1527 aa17.68■□□□□ 0.42
PPFIA1-220ENST00000532024 SETD5Q9C0A6 1442 aa17.68■□□□□ 0.42
PPFIA1-220ENST00000532024 CEP152O94986 1710 aa17.66■□□□□ 0.42
PPFIA1-220ENST00000532024 VWDEQ8N2E2 1590 aa17.66■□□□□ 0.42
PPFIA1-220ENST00000532024 CAMSAP1Q5T5Y3 1602 aa17.65■□□□□ 0.42
PPFIA1-220ENST00000532024 LMTK2Q8IWU2 1503 aa17.65■□□□□ 0.42
PPFIA1-220ENST00000532024 NUP155O75694 1391 aa17.65■□□□□ 0.42
PPFIA1-220ENST00000532024 IQGAP3Q86VI3 1631 aa17.65■□□□□ 0.42
PPFIA1-220ENST00000532024 C3P01024 1663 aa17.64■□□□□ 0.42
PPFIA1-220ENST00000532024 ZMYM3Q14202 1370 aa17.64■□□□□ 0.41
PPFIA1-220ENST00000532024 TET3O43151 1660 aa17.62■□□□□ 0.41
PPFIA1-220ENST00000532024 PZPP20742 1482 aa17.62■□□□□ 0.41
PPFIA1-220ENST00000532024 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
PPFIA1-220ENST00000532024 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
PPFIA1-220ENST00000532024 TRIM52Q96A61 297 aa17.61■□□□□ 0.41
PPFIA1-220ENST00000532024 NPATQ14207 1427 aa17.61■□□□□ 0.41
PPFIA1-220ENST00000532024 RAB3GAP2Q9H2M9 1393 aa17.6■□□□□ 0.41
PPFIA1-220ENST00000532024 ARHGAP31Q2M1Z3 1444 aa17.6■□□□□ 0.41
PPFIA1-220ENST00000532024 RPRD2Q5VT52 1461 aaKnown RBP17.58■□□□□ 0.41
PPFIA1-220ENST00000532024 CEBPAP49715 358 aaPredicted RBP17.57■□□□□ 0.4
PPFIA1-220ENST00000532024 HRCP23327 699 aa17.56■□□□□ 0.4
PPFIA1-220ENST00000532024 PREX1Q8TCU6 1659 aa17.54■□□□□ 0.4
PPFIA1-220ENST00000532024 ERVK-7P63135 1459 aa17.53■□□□□ 0.4
PPFIA1-220ENST00000532024 FBXO41Q8TF61 875 aa17.53■□□□□ 0.4
PPFIA1-220ENST00000532024 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
PPFIA1-220ENST00000532024 SPATA31D1Q6ZQQ2 1576 aa17.53■□□□□ 0.4
PPFIA1-220ENST00000532024 TNRQ92752 1358 aa17.53■□□□□ 0.4
PPFIA1-220ENST00000532024 UHRF1BP1Q6BDS2 1440 aa17.52■□□□□ 0.4
PPFIA1-220ENST00000532024 E9PCH4 1651 aa17.52■□□□□ 0.39
PPFIA1-220ENST00000532024 SETD1BQ9UPS6 1966 aaKnown RBP17.51■□□□□ 0.39
PPFIA1-220ENST00000532024 MYO3AQ8NEV4 1616 aa17.5■□□□□ 0.39
PPFIA1-220ENST00000532024 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
PPFIA1-220ENST00000532024 FBXO31Q5XUX0 539 aaPredicted RBP17.49■□□□□ 0.39
PPFIA1-220ENST00000532024 PKD2Q13563 968 aa17.47■□□□□ 0.39
PPFIA1-220ENST00000532024 NOS1P29475 1434 aa17.47■□□□□ 0.39
PPFIA1-220ENST00000532024 ZNF142P52746 1687 aaPredicted RBP17.46■□□□□ 0.39
PPFIA1-220ENST00000532024 MPHOSPH9Q99550 1183 aa17.46■□□□□ 0.39
PPFIA1-220ENST00000532024 CFAP65Q6ZU64 1925 aaKnown RBP17.46■□□□□ 0.39
PPFIA1-220ENST00000532024 SPHKAPQ2M3C7 1700 aa17.46■□□□□ 0.39
PPFIA1-220ENST00000532024 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
PPFIA1-220ENST00000532024 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
PPFIA1-220ENST00000532024 A2ML1A8K2U0 1454 aa17.44■□□□□ 0.38
PPFIA1-220ENST00000532024 SYNMO15061 1565 aa17.44■□□□□ 0.38
PPFIA1-220ENST00000532024 SLC52A1Q9NWF4 448 aa17.43■□□□□ 0.38
PPFIA1-220ENST00000532024 LMTK3Q96Q04 1460 aa17.43■□□□□ 0.38
PPFIA1-220ENST00000532024 TRPM2O94759 1503 aa17.42■□□□□ 0.38
PPFIA1-220ENST00000532024 PTPRTO14522 1441 aa17.41■□□□□ 0.38
PPFIA1-220ENST00000532024 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
PPFIA1-220ENST00000532024 STAG3Q9UJ98 1225 aa17.4■□□□□ 0.38
PPFIA1-220ENST00000532024 PIK3C2BO00750 1634 aa17.39■□□□□ 0.37
PPFIA1-220ENST00000532024 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
PPFIA1-220ENST00000532024 ADGRB3O60242 1522 aa17.37■□□□□ 0.37
PPFIA1-220ENST00000532024 THEMISQ8N1K5 641 aaPredicted RBP17.37■□□□□ 0.37
PPFIA1-220ENST00000532024 CCDC144AA2RUR9 1427 aa17.37■□□□□ 0.37
PPFIA1-220ENST00000532024 UBR1Q8IWV7 1749 aa17.35■□□□□ 0.37
PPFIA1-220ENST00000532024 IDI1Q13907 227 aa17.35■□□□□ 0.37
PPFIA1-220ENST00000532024 FOXD1Q16676 465 aa17.35■□□□□ 0.37
PPFIA1-220ENST00000532024 CLTCL1P53675 1640 aa17.34■□□□□ 0.37
PPFIA1-220ENST00000532024 PLA2R1Q13018 1463 aa17.33■□□□□ 0.37
PPFIA1-220ENST00000532024 CHGAP10645 457 aaKnown RBP17.32■□□□□ 0.36
PPFIA1-220ENST00000532024 KIF1BO60333 1816 aa17.32■□□□□ 0.36
PPFIA1-220ENST00000532024 HSPA2P54652 639 aa17.31■□□□□ 0.36
PPFIA1-220ENST00000532024 TMEM131LA2VDJ0 1609 aa17.31■□□□□ 0.36
PPFIA1-220ENST00000532024 ANKRD30BQ9BXX2 1392 aa17.28■□□□□ 0.36
PPFIA1-220ENST00000532024 SLIT1O75093 1534 aa17.28■□□□□ 0.36
PPFIA1-220ENST00000532024 HDGFP51858 240 aaKnown RBP17.28■□□□□ 0.36
PPFIA1-220ENST00000532024 EID1Q9Y6B2 187 aa17.28■□□□□ 0.36
PPFIA1-220ENST00000532024 DHX57Q6P158 1386 aaKnown RBP17.28■□□□□ 0.36
PPFIA1-220ENST00000532024 TMEM2Q9UHN6 1383 aa17.28■□□□□ 0.36
PPFIA1-220ENST00000532024 POLR1AO95602 1720 aaPredicted RBP17.27■□□□□ 0.36
PPFIA1-220ENST00000532024 ANKLE2Q86XL3 938 aa17.27■□□□□ 0.36
PPFIA1-220ENST00000532024 ARHGAP23Q9P227 1491 aa17.26■□□□□ 0.35
PPFIA1-220ENST00000532024 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
PPFIA1-220ENST00000532024 NEURL4Q96JN8 1562 aa17.25■□□□□ 0.35
PPFIA1-220ENST00000532024 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
PPFIA1-220ENST00000532024 MYO5BQ9ULV0 1848 aa17.25■□□□□ 0.35
PPFIA1-220ENST00000532024 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
PPFIA1-220ENST00000532024 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms