RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 TSPY10P0CW01 314 aa21.21■□□□□ 0.99
SSH3-207ENST00000531495 FBXO31Q5XUX0 539 aaPredicted RBP21.21■□□□□ 0.99
SSH3-207ENST00000531495 MYO3AQ8NEV4 1616 aa21.21■□□□□ 0.99
SSH3-207ENST00000531495 TNRQ92752 1358 aa21.21■□□□□ 0.99
SSH3-207ENST00000531495 ADGBQ8N7X0 1667 aa21.19■□□□□ 0.98
SSH3-207ENST00000531495 PIP4K2BP78356 416 aa21.19■□□□□ 0.98
SSH3-207ENST00000531495 CEP162Q5TB80 1403 aa21.19■□□□□ 0.98
SSH3-207ENST00000531495 ZNF142P52746 1687 aaPredicted RBP21.18■□□□□ 0.98
SSH3-207ENST00000531495 EHBP1L1Q8N3D4 1523 aa21.16■□□□□ 0.98
SSH3-207ENST00000531495 TIAM1Q13009 1591 aa21.14■□□□□ 0.97
SSH3-207ENST00000531495 HSPA1LP34931 641 aa21.13■□□□□ 0.97
SSH3-207ENST00000531495 CCDC141Q6ZP82 1450 aa21.13■□□□□ 0.97
SSH3-207ENST00000531495 DNMT1P26358 1616 aaKnown RBP21.12■□□□□ 0.97
SSH3-207ENST00000531495 MIA2Q96PC5 1412 aa21.12■□□□□ 0.97
SSH3-207ENST00000531495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.11■□□□□ 0.97
SSH3-207ENST00000531495 PZPP20742 1482 aa21.11■□□□□ 0.97
SSH3-207ENST00000531495 SHANK2Q9UPX8 1470 aa21.11■□□□□ 0.97
SSH3-207ENST00000531495 CPS1P31327 1500 aa21.1■□□□□ 0.97
SSH3-207ENST00000531495 KDM5DQ9BY66 1539 aa21.09■□□□□ 0.97
SSH3-207ENST00000531495 FAM135AQ9P2D6 1515 aa21.09■□□□□ 0.97
SSH3-207ENST00000531495 NCOA2Q15596 1464 aa21.07■□□□□ 0.96
SSH3-207ENST00000531495 NLRP1Q9C000 1473 aa21.07■□□□□ 0.96
SSH3-207ENST00000531495 CAMSAP2Q08AD1 1489 aa21.06■□□□□ 0.96
SSH3-207ENST00000531495 NPHP4O75161 1426 aaPredicted RBP21.04■□□□□ 0.96
SSH3-207ENST00000531495 PHF23Q9BUL5 403 aaPredicted RBP21.04■□□□□ 0.96
SSH3-207ENST00000531495 UGGT1Q9NYU2 1555 aa21.02■□□□□ 0.96
SSH3-207ENST00000531495 MED14O60244 1454 aa20.99■□□□□ 0.95
SSH3-207ENST00000531495 NEURL4Q96JN8 1562 aa20.98■□□□□ 0.95
SSH3-207ENST00000531495 POLR1AO95602 1720 aaPredicted RBP20.98■□□□□ 0.95
SSH3-207ENST00000531495 ARHGEF5Q12774 1597 aa20.96■□□□□ 0.95
SSH3-207ENST00000531495 TXNDC2Q86VQ3 553 aa20.93■□□□□ 0.94
SSH3-207ENST00000531495 SENP3Q9H4L4 574 aaPredicted RBP20.93■□□□□ 0.94
SSH3-207ENST00000531495 EID1Q9Y6B2 187 aa20.93■□□□□ 0.94
SSH3-207ENST00000531495 VWDEQ8N2E2 1590 aa20.93■□□□□ 0.94
SSH3-207ENST00000531495 DEPDC5O75140 1603 aa20.93■□□□□ 0.94
SSH3-207ENST00000531495 MED1Q15648 1581 aaPredicted RBP20.91■□□□□ 0.94
SSH3-207ENST00000531495 LRRC9Q6ZRR7 1453 aa20.9■□□□□ 0.94
SSH3-207ENST00000531495 STAG3Q9UJ98 1225 aa20.9■□□□□ 0.94
SSH3-207ENST00000531495 ABCC3O15438 1527 aa20.88■□□□□ 0.93
SSH3-207ENST00000531495 ERVK-7P63135 1459 aa20.88■□□□□ 0.93
SSH3-207ENST00000531495 MYOM3Q5VTT5 1437 aa20.87■□□□□ 0.93
SSH3-207ENST00000531495 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
SSH3-207ENST00000531495 APLP2Q06481 763 aa20.86■□□□□ 0.93
SSH3-207ENST00000531495 KANK4Q5T7N3 995 aaPredicted RBP20.86■□□□□ 0.93
SSH3-207ENST00000531495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.86■□□□□ 0.93
SSH3-207ENST00000531495 LRRC7Q96NW7 1537 aa20.86■□□□□ 0.93
SSH3-207ENST00000531495 IQGAP1P46940 1657 aa20.86■□□□□ 0.93
SSH3-207ENST00000531495 LTKP29376 864 aa20.85■□□□□ 0.93
SSH3-207ENST00000531495 MAST1Q9Y2H9 1570 aa20.85■□□□□ 0.93
SSH3-207ENST00000531495 RRP7BPQ9NSQ0 103 aa20.84■□□□□ 0.93
SSH3-207ENST00000531495 RNF17Q9BXT8 1623 aaKnown RBP20.84■□□□□ 0.93
SSH3-207ENST00000531495 ZC3H13Q5T200 1668 aaKnown RBP20.83■□□□□ 0.93
SSH3-207ENST00000531495 SCAF11Q99590 1463 aaKnown RBP20.83■□□□□ 0.93
SSH3-207ENST00000531495 LOC105371045A0A1W2PR82 267 aa20.82■□□□□ 0.92
SSH3-207ENST00000531495 DUOX2Q9NRD8 1548 aa20.82■□□□□ 0.92
SSH3-207ENST00000531495 KANK1Q14678 1352 aa20.82■□□□□ 0.92
SSH3-207ENST00000531495 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
SSH3-207ENST00000531495 KIF15Q9NS87 1388 aa20.8■□□□□ 0.92
SSH3-207ENST00000531495 ARHGAP31Q2M1Z3 1444 aa20.79■□□□□ 0.92
SSH3-207ENST00000531495 MAP3K1Q13233 1512 aa20.78■□□□□ 0.92
SSH3-207ENST00000531495 ALKQ9UM73 1620 aa20.77■□□□□ 0.92
SSH3-207ENST00000531495 ERBINQ96RT1 1412 aa20.76■□□□□ 0.91
SSH3-207ENST00000531495 SYNMO15061 1565 aa20.76■□□□□ 0.91
SSH3-207ENST00000531495 TMEM2Q9UHN6 1383 aa20.75■□□□□ 0.91
SSH3-207ENST00000531495 ARHGAP23Q9P227 1491 aa20.75■□□□□ 0.91
SSH3-207ENST00000531495 SLIT1O75093 1534 aa20.74■□□□□ 0.91
SSH3-207ENST00000531495 KCNA6P17658 529 aa20.74■□□□□ 0.91
SSH3-207ENST00000531495 PROSER2Q86WR7 435 aaPredicted RBP20.74■□□□□ 0.91
SSH3-207ENST00000531495 BCANQ96GW7 911 aa20.74■□□□□ 0.91
SSH3-207ENST00000531495 CFAP65Q6ZU64 1925 aaKnown RBP20.74■□□□□ 0.91
SSH3-207ENST00000531495 IDI1Q13907 227 aa20.73■□□□□ 0.91
SSH3-207ENST00000531495 UBR1Q8IWV7 1749 aa20.73■□□□□ 0.91
SSH3-207ENST00000531495 ABCC5O15440 1437 aa20.72■□□□□ 0.91
SSH3-207ENST00000531495 MROH1Q8NDA8 1641 aa20.72■□□□□ 0.91
SSH3-207ENST00000531495 FAM135BQ49AJ0 1406 aa20.71■□□□□ 0.91
SSH3-207ENST00000531495 CHIC2Q9UKJ5 165 aa20.71■□□□□ 0.91
SSH3-207ENST00000531495 STRCP1A6NGW2 1772 aa20.71■□□□□ 0.91
SSH3-207ENST00000531495 ANKRD30AQ9BXX3 1397 aa20.71■□□□□ 0.91
SSH3-207ENST00000531495 SLC26A8Q96RN1 970 aa20.7■□□□□ 0.9
SSH3-207ENST00000531495 TMEM94Q12767 1356 aa20.7■□□□□ 0.9
SSH3-207ENST00000531495 CEP152O94986 1710 aa20.7■□□□□ 0.9
SSH3-207ENST00000531495 HDGFP51858 240 aaKnown RBP20.69■□□□□ 0.9
SSH3-207ENST00000531495 SLC52A1Q9NWF4 448 aa20.69■□□□□ 0.9
SSH3-207ENST00000531495 PRDM15P57071 1507 aaPredicted RBP20.68■□□□□ 0.9
SSH3-207ENST00000531495 RGS17Q9UGC6 210 aaPredicted RBP20.67■□□□□ 0.9
SSH3-207ENST00000531495 DAPK1P53355 1430 aa20.66■□□□□ 0.9
SSH3-207ENST00000531495 EFCAB6Q5THR3 1501 aa20.63■□□□□ 0.89
SSH3-207ENST00000531495 RBM33Q96EV2 1170 aaKnown RBP20.63■□□□□ 0.89
SSH3-207ENST00000531495 PIK3C2BO00750 1634 aa20.61■□□□□ 0.89
SSH3-207ENST00000531495 PPP1R15AO75807 674 aaPredicted RBP20.61■□□□□ 0.89
SSH3-207ENST00000531495 SLAIN2Q9P270 581 aa20.61■□□□□ 0.89
SSH3-207ENST00000531495 MSH6P52701 1360 aa20.6■□□□□ 0.89
SSH3-207ENST00000531495 PTPN23Q9H3S7 1636 aa20.6■□□□□ 0.89
SSH3-207ENST00000531495 FGD6Q6ZV73 1430 aa20.6■□□□□ 0.89
SSH3-207ENST00000531495 LMTK2Q8IWU2 1503 aa20.59■□□□□ 0.89
SSH3-207ENST00000531495 POTEAQ6S8J7 498 aa20.58■□□□□ 0.89
SSH3-207ENST00000531495 NOS1P29475 1434 aa20.57■□□□□ 0.88
SSH3-207ENST00000531495 FAM50AQ14320 339 aaKnown RBP20.57■□□□□ 0.88
SSH3-207ENST00000531495 C14orf37Q86TY3 774 aa20.55■□□□□ 0.88
SSH3-207ENST00000531495 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms