RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 SCUBE2Q9NQ36 999 aa11.96□□□□□ -0.49
TRIM53CP-201ENST00000531490 FBXO22Q8NEZ5 403 aa11.95□□□□□ -0.5
TRIM53CP-201ENST00000531490 KCNH8Q96L42 1107 aa11.95□□□□□ -0.5
TRIM53CP-201ENST00000531490 NLRP6P59044 892 aa11.94□□□□□ -0.5
TRIM53CP-201ENST00000531490 L3MBTL3Q96JM7 780 aaPredicted RBP11.94□□□□□ -0.5
TRIM53CP-201ENST00000531490 IQGAP2Q13576 1575 aa11.94□□□□□ -0.5
TRIM53CP-201ENST00000531490 TEX14Q8IWB6 1497 aa11.93□□□□□ -0.5
TRIM53CP-201ENST00000531490 MAP3K4Q9Y6R4 1608 aa11.92□□□□□ -0.5
TRIM53CP-201ENST00000531490 WDR7Q9Y4E6 1490 aa11.9□□□□□ -0.5
TRIM53CP-201ENST00000531490 CD109Q6YHK3 1445 aa11.9□□□□□ -0.5
TRIM53CP-201ENST00000531490 ARID3CA6NKF2 412 aa11.9□□□□□ -0.5
TRIM53CP-201ENST00000531490 FBXO41Q8TF61 875 aa11.9□□□□□ -0.5
TRIM53CP-201ENST00000531490 BOLA1Q9Y3E2 137 aa11.9□□□□□ -0.5
TRIM53CP-201ENST00000531490 ZCCHC11Q5TAX3 1644 aaKnown RBP11.89□□□□□ -0.51
TRIM53CP-201ENST00000531490 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
TRIM53CP-201ENST00000531490 UGGT2Q9NYU1 1516 aa11.88□□□□□ -0.51
TRIM53CP-201ENST00000531490 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
TRIM53CP-201ENST00000531490 RAPGEF2Q9Y4G8 1499 aa11.85□□□□□ -0.51
TRIM53CP-201ENST00000531490 G3V3G9 751 aa11.85□□□□□ -0.51
TRIM53CP-201ENST00000531490 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
TRIM53CP-201ENST00000531490 MAGI3Q5TCQ9 1506 aa11.85□□□□□ -0.51
TRIM53CP-201ENST00000531490 KIAA0556O60303 1618 aa11.84□□□□□ -0.51
TRIM53CP-201ENST00000531490 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
TRIM53CP-201ENST00000531490 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
TRIM53CP-201ENST00000531490 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
TRIM53CP-201ENST00000531490 RAPGEF3O95398 923 aa11.82□□□□□ -0.52
TRIM53CP-201ENST00000531490 PPP1R37O75864 691 aa11.8□□□□□ -0.52
TRIM53CP-201ENST00000531490 P3H3Q8IVL6 736 aa11.8□□□□□ -0.52
TRIM53CP-201ENST00000531490 KIF21BO75037 1637 aa11.79□□□□□ -0.52
TRIM53CP-201ENST00000531490 PTPRMP28827 1452 aa11.79□□□□□ -0.52
TRIM53CP-201ENST00000531490 ABCA8O94911 1581 aa11.79□□□□□ -0.52
TRIM53CP-201ENST00000531490 ARID4BQ4LE39 1312 aaPredicted RBP11.77□□□□□ -0.53
TRIM53CP-201ENST00000531490 HSPA2P54652 639 aa11.76□□□□□ -0.53
TRIM53CP-201ENST00000531490 ARAP3Q8WWN8 1544 aa11.75□□□□□ -0.53
TRIM53CP-201ENST00000531490 ATP10BO94823 1461 aa11.74□□□□□ -0.53
TRIM53CP-201ENST00000531490 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
TRIM53CP-201ENST00000531490 CFAP43Q8NDM7 1665 aa11.74□□□□□ -0.53
TRIM53CP-201ENST00000531490 GOLGA3Q08378 1498 aa11.73□□□□□ -0.53
TRIM53CP-201ENST00000531490 TMEM92Q6UXU6 159 aa11.72□□□□□ -0.53
TRIM53CP-201ENST00000531490 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
TRIM53CP-201ENST00000531490 LMTK3Q96Q04 1460 aa11.72□□□□□ -0.53
TRIM53CP-201ENST00000531490 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.53
TRIM53CP-201ENST00000531490 ADAMTSL3P82987 1691 aa11.7□□□□□ -0.54
TRIM53CP-201ENST00000531490 PCF11O94913 1555 aaKnown RBP11.69□□□□□ -0.54
TRIM53CP-201ENST00000531490 FAM9AQ8IZU1 332 aaPredicted RBP11.68□□□□□ -0.54
TRIM53CP-201ENST00000531490 PRXQ9BXM0 1461 aa11.68□□□□□ -0.54
TRIM53CP-201ENST00000531490 PHLDB1Q86UU1 1377 aa11.68□□□□□ -0.54
TRIM53CP-201ENST00000531490 RANGAP1P46060 587 aaPredicted RBP11.67□□□□□ -0.54
TRIM53CP-201ENST00000531490 MADDQ8WXG6 1647 aa11.67□□□□□ -0.54
TRIM53CP-201ENST00000531490 MLECQ14165 292 aa11.67□□□□□ -0.54
TRIM53CP-201ENST00000531490 ILDR2Q71H61 639 aa11.66□□□□□ -0.54
TRIM53CP-201ENST00000531490 CERKQ8TCT0 537 aa11.66□□□□□ -0.54
TRIM53CP-201ENST00000531490 FAM163AQ96GL9 167 aaPredicted RBP11.66□□□□□ -0.54
TRIM53CP-201ENST00000531490 NEO1Q92859 1461 aa11.65□□□□□ -0.54
TRIM53CP-201ENST00000531490 FRMPD1Q5SYB0 1578 aa11.65□□□□□ -0.54
TRIM53CP-201ENST00000531490 LCE2DQ5TA82 110 aaPredicted RBP11.64□□□□□ -0.55
TRIM53CP-201ENST00000531490 ABCA9Q8IUA7 1624 aa11.63□□□□□ -0.55
TRIM53CP-201ENST00000531490 CTTNBP2Q8WZ74 1663 aa11.63□□□□□ -0.55
TRIM53CP-201ENST00000531490 BCORL1Q5H9F3 1711 aa11.62□□□□□ -0.55
TRIM53CP-201ENST00000531490 SNPHO15079 494 aa11.62□□□□□ -0.55
TRIM53CP-201ENST00000531490 YEATS2Q9ULM3 1422 aa11.62□□□□□ -0.55
TRIM53CP-201ENST00000531490 KIF3CO14782 793 aa11.61□□□□□ -0.55
TRIM53CP-201ENST00000531490 DENND4BO75064 1496 aaPredicted RBP11.61□□□□□ -0.55
TRIM53CP-201ENST00000531490 NUP153P49790 1475 aaKnown RBP11.61□□□□□ -0.55
TRIM53CP-201ENST00000531490 C2orf72A6NCS6 295 aa11.6□□□□□ -0.55
TRIM53CP-201ENST00000531490 AKNAQ7Z591 1439 aa11.6□□□□□ -0.55
TRIM53CP-201ENST00000531490 CEBPAP49715 358 aaPredicted RBP11.59□□□□□ -0.55
TRIM53CP-201ENST00000531490 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
TRIM53CP-201ENST00000531490 DISP3Q9P2K9 1392 aa11.59□□□□□ -0.55
TRIM53CP-201ENST00000531490 RIMS1Q86UR5 1692 aaKnown RBP11.58□□□□□ -0.56
TRIM53CP-201ENST00000531490 ARHGEF40Q8TER5 1519 aa11.58□□□□□ -0.56
TRIM53CP-201ENST00000531490 FHOD3Q2V2M9 1422 aa11.58□□□□□ -0.56
TRIM53CP-201ENST00000531490 PLEKHD1A6NEE1 506 aa11.58□□□□□ -0.56
TRIM53CP-201ENST00000531490 ST18O60284 1047 aa11.57□□□□□ -0.56
TRIM53CP-201ENST00000531490 HOXB3P14651 431 aaPredicted RBP11.57□□□□□ -0.56
TRIM53CP-201ENST00000531490 FANCAO15360 1455 aa11.57□□□□□ -0.56
TRIM53CP-201ENST00000531490 SPRYD3Q8NCJ5 442 aa11.56□□□□□ -0.56
TRIM53CP-201ENST00000531490 TMC2Q8TDI7 906 aa11.56□□□□□ -0.56
TRIM53CP-201ENST00000531490 RAPGEF6Q8TEU7 1601 aa11.55□□□□□ -0.56
TRIM53CP-201ENST00000531490 POGZQ7Z3K3 1410 aa11.55□□□□□ -0.56
TRIM53CP-201ENST00000531490 SOCS7O14512 581 aa11.54□□□□□ -0.56
TRIM53CP-201ENST00000531490 SIGLEC1Q9BZZ2 1709 aa11.54□□□□□ -0.56
TRIM53CP-201ENST00000531490 EEA1Q15075 1411 aa11.54□□□□□ -0.56
TRIM53CP-201ENST00000531490 SAMD9Q5K651 1589 aa11.54□□□□□ -0.56
TRIM53CP-201ENST00000531490 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
TRIM53CP-201ENST00000531490 ZFYVE16Q7Z3T8 1539 aa11.52□□□□□ -0.57
TRIM53CP-201ENST00000531490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRIM53CP-201ENST00000531490 CFAP44Q96MT7 982 aa11.52□□□□□ -0.57
TRIM53CP-201ENST00000531490 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
TRIM53CP-201ENST00000531490 SCAPERQ9BY12 1400 aa11.52□□□□□ -0.57
TRIM53CP-201ENST00000531490 DOK7Q18PE1 504 aa11.51□□□□□ -0.57
TRIM53CP-201ENST00000531490 RICTORQ6R327 1708 aa11.5□□□□□ -0.57
TRIM53CP-201ENST00000531490 TTC37Q6PGP7 1564 aa11.5□□□□□ -0.57
TRIM53CP-201ENST00000531490 CRISPLD2Q9H0B8 497 aa11.5□□□□□ -0.57
TRIM53CP-201ENST00000531490 ZMYM4Q5VZL5 1548 aa11.5□□□□□ -0.57
TRIM53CP-201ENST00000531490 HECW1Q76N89 1606 aa11.49□□□□□ -0.57
TRIM53CP-201ENST00000531490 NCKAP5LQ9HCH0 1330 aa11.48□□□□□ -0.57
TRIM53CP-201ENST00000531490 CDK13Q14004 1512 aaKnown RBP11.48□□□□□ -0.57
TRIM53CP-201ENST00000531490 POTEMA6NI47 508 aa11.48□□□□□ -0.57
TRIM53CP-201ENST00000531490 POTEGQ6S5H5 508 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms