RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 FBXO31Q5XUX0 539 aaPredicted RBP34.86■■■■□ 3.17
TRAPPC4-210ENST00000531290 PKD2Q13563 968 aa34.85■■■■□ 3.17
TRAPPC4-210ENST00000531290 KDM5DQ9BY66 1539 aa34.81■■■■□ 3.16
TRAPPC4-210ENST00000531290 TNRQ92752 1358 aa34.8■■■■□ 3.16
TRAPPC4-210ENST00000531290 FAM135AQ9P2D6 1515 aa34.79■■■■□ 3.16
TRAPPC4-210ENST00000531290 CEP170BQ9Y4F5 1589 aaPredicted RBP34.78■■■■□ 3.16
TRAPPC4-210ENST00000531290 MYO3AQ8NEV4 1616 aa34.77■■■■□ 3.16
TRAPPC4-210ENST00000531290 MAST1Q9Y2H9 1570 aa34.77■■■■□ 3.16
TRAPPC4-210ENST00000531290 PZPP20742 1482 aa34.77■■■■□ 3.16
TRAPPC4-210ENST00000531290 PLA2R1Q13018 1463 aa34.77■■■■□ 3.16
TRAPPC4-210ENST00000531290 A2ML1A8K2U0 1454 aa34.75■■■■□ 3.15
TRAPPC4-210ENST00000531290 RRP7BPQ9NSQ0 103 aa34.7■■■■□ 3.15
TRAPPC4-210ENST00000531290 ZNF142P52746 1687 aaPredicted RBP34.7■■■■□ 3.14
TRAPPC4-210ENST00000531290 TCOF1Q13428 1488 aaKnown RBP34.69■■■■□ 3.14
TRAPPC4-210ENST00000531290 ABCC5O15440 1437 aa34.68■■■■□ 3.14
TRAPPC4-210ENST00000531290 THEMISQ8N1K5 641 aaPredicted RBP34.67■■■■□ 3.14
TRAPPC4-210ENST00000531290 KIF15Q9NS87 1388 aa34.66■■■■□ 3.14
TRAPPC4-210ENST00000531290 FGD6Q6ZV73 1430 aa34.64■■■■□ 3.14
TRAPPC4-210ENST00000531290 ZNF335Q9H4Z2 1342 aaPredicted RBP34.64■■■■□ 3.14
TRAPPC4-210ENST00000531290 LTBP4Q8N2S1 1624 aa34.64■■■■□ 3.14
TRAPPC4-210ENST00000531290 DUOX2Q9NRD8 1548 aa34.64■■■■□ 3.14
TRAPPC4-210ENST00000531290 PTPN23Q9H3S7 1636 aa34.62■■■■□ 3.13
TRAPPC4-210ENST00000531290 SHANK2Q9UPX8 1470 aa34.61■■■■□ 3.13
TRAPPC4-210ENST00000531290 ANKLE2Q86XL3 938 aa34.61■■■■□ 3.13
TRAPPC4-210ENST00000531290 DNMT1P26358 1616 aaKnown RBP34.61■■■■□ 3.13
TRAPPC4-210ENST00000531290 ABCC3O15438 1527 aa34.6■■■■□ 3.13
TRAPPC4-210ENST00000531290 NLRP1Q9C000 1473 aa34.6■■■■□ 3.13
TRAPPC4-210ENST00000531290 DAPK1P53355 1430 aa34.6■■■■□ 3.13
TRAPPC4-210ENST00000531290 RNF17Q9BXT8 1623 aaKnown RBP34.59■■■■□ 3.13
TRAPPC4-210ENST00000531290 CHIC2Q9UKJ5 165 aa34.59■■■■□ 3.13
TRAPPC4-210ENST00000531290 EIF2AK4Q9P2K8 1649 aaKnown RBP34.58■■■■□ 3.13
TRAPPC4-210ENST00000531290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.57■■■■□ 3.123e-6■■■■□ 26.4
TRAPPC4-210ENST00000531290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.56■■■■□ 3.12
TRAPPC4-210ENST00000531290 IQSEC2Q5JU85 1478 aa34.55■■■■□ 3.12
TRAPPC4-210ENST00000531290 ERBINQ96RT1 1412 aa34.55■■■■□ 3.12
TRAPPC4-210ENST00000531290 ANKRD30AQ9BXX3 1397 aa34.54■■■■□ 3.12
TRAPPC4-210ENST00000531290 FAM50AQ14320 339 aaKnown RBP34.52■■■■□ 3.12
TRAPPC4-210ENST00000531290 UGGT1Q9NYU2 1555 aa34.5■■■■□ 3.11
TRAPPC4-210ENST00000531290 ZC3H13Q5T200 1668 aaKnown RBP34.48■■■■□ 3.11
TRAPPC4-210ENST00000531290 ERVK-7P63135 1459 aa34.48■■■■□ 3.11
TRAPPC4-210ENST00000531290 KANK1Q14678 1352 aa34.48■■■■□ 3.11
TRAPPC4-210ENST00000531290 MROH1Q8NDA8 1641 aa34.48■■■■□ 3.11
TRAPPC4-210ENST00000531290 SPATA31D1Q6ZQQ2 1576 aa34.45■■■■□ 3.11
TRAPPC4-210ENST00000531290 UBAP1LF5GYI3 381 aa34.44■■■■□ 3.1
TRAPPC4-210ENST00000531290 CROCC2H7BZ55 1655 aa34.41■■■■□ 3.1
TRAPPC4-210ENST00000531290 ARHGAP31Q2M1Z3 1444 aa34.41■■■■□ 3.1
TRAPPC4-210ENST00000531290 PRDM15P57071 1507 aaPredicted RBP34.39■■■■□ 3.1
TRAPPC4-210ENST00000531290 NPHP4O75161 1426 aaPredicted RBP34.38■■■■□ 3.09
TRAPPC4-210ENST00000531290 NEURL4Q96JN8 1562 aa34.37■■■■□ 3.09
TRAPPC4-210ENST00000531290 MED14O60244 1454 aa34.34■■■■□ 3.09
TRAPPC4-210ENST00000531290 CEP152O94986 1710 aa34.33■■■■□ 3.09
TRAPPC4-210ENST00000531290 STAG3Q9UJ98 1225 aa34.31■■■■□ 3.08
TRAPPC4-210ENST00000531290 POLR1AO95602 1720 aaPredicted RBP34.3■■■■□ 3.08
TRAPPC4-210ENST00000531290 ADGRL2O95490 1459 aa34.3■■■■□ 3.08
TRAPPC4-210ENST00000531290 TXNDC2Q86VQ3 553 aa34.29■■■■□ 3.08
TRAPPC4-210ENST00000531290 DEPDC5O75140 1603 aa34.28■■■■□ 3.08
TRAPPC4-210ENST00000531290 CPS1P31327 1500 aa34.28■■■■□ 3.08
TRAPPC4-210ENST00000531290 EID1Q9Y6B2 187 aa34.27■■■■□ 3.08
TRAPPC4-210ENST00000531290 ANKRD50Q9ULJ7 1429 aa34.25■■■■□ 3.07
TRAPPC4-210ENST00000531290 TOM1O60784 492 aa34.24■■■■□ 3.07
TRAPPC4-210ENST00000531290 LMTK2Q8IWU2 1503 aa34.24■■■■□ 3.07
TRAPPC4-210ENST00000531290 LTKP29376 864 aa34.23■■■■□ 3.07
TRAPPC4-210ENST00000531290 IDI1Q13907 227 aa34.22■■■■□ 3.07
TRAPPC4-210ENST00000531290 DISP3Q9P2K9 1392 aa34.21■■■■□ 3.07
TRAPPC4-210ENST00000531290 SCAF11Q99590 1463 aaKnown RBP34.2■■■■□ 3.07
TRAPPC4-210ENST00000531290 SCAF1Q9H7N4 1312 aaKnown RBP34.2■■■■□ 3.07
TRAPPC4-210ENST00000531290 VWDEQ8N2E2 1590 aa34.19■■■■□ 3.06
TRAPPC4-210ENST00000531290 PIP4K2BP78356 416 aa34.18■■■■□ 3.06
TRAPPC4-210ENST00000531290 PPARGC1BQ86YN6 1023 aaKnown RBP34.18■■■■□ 3.06
TRAPPC4-210ENST00000531290 CFAP65Q6ZU64 1925 aaKnown RBP34.17■■■■□ 3.06
TRAPPC4-210ENST00000531290 ARHGAP23Q9P227 1491 aa34.16■■■■□ 3.06
TRAPPC4-210ENST00000531290 UBR1Q8IWV7 1749 aa34.16■■■■□ 3.06
TRAPPC4-210ENST00000531290 IQGAP1P46940 1657 aa34.15■■■■□ 3.06
TRAPPC4-210ENST00000531290 TMEM2Q9UHN6 1383 aa34.15■■■■□ 3.06
TRAPPC4-210ENST00000531290 SLC52A1Q9NWF4 448 aa34.15■■■■□ 3.06
TRAPPC4-210ENST00000531290 SLIT1O75093 1534 aa34.14■■■■□ 3.06
TRAPPC4-210ENST00000531290 ITGAEP38570 1179 aa34.12■■■■□ 3.05
TRAPPC4-210ENST00000531290 NOS1P29475 1434 aa34.12■■■■□ 3.05
TRAPPC4-210ENST00000531290 ROCK1Q13464 1354 aa34.1■■■■□ 3.05
TRAPPC4-210ENST00000531290 EFCAB6Q5THR3 1501 aa34.09■■■■□ 3.05
TRAPPC4-210ENST00000531290 PIK3C2BO00750 1634 aa34.07■■■■□ 3.04
TRAPPC4-210ENST00000531290 RPRD2Q5VT52 1461 aaKnown RBP34.04■■■■□ 3.04
TRAPPC4-210ENST00000531290 HSPA1LP34931 641 aa34.03■■■■□ 3.04
TRAPPC4-210ENST00000531290 LRRC7Q96NW7 1537 aa34.02■■■■□ 3.04
TRAPPC4-210ENST00000531290 SYNMO15061 1565 aa34.01■■■■□ 3.03
TRAPPC4-210ENST00000531290 BCANQ96GW7 911 aa33.99■■■■□ 3.03
TRAPPC4-210ENST00000531290 SLC26A8Q96RN1 970 aa33.97■■■■□ 3.03
TRAPPC4-210ENST00000531290 HDGFP51858 240 aaKnown RBP33.96■■■■□ 3.03
TRAPPC4-210ENST00000531290 ILDR2Q71H61 639 aa33.95■■■■□ 3.03
TRAPPC4-210ENST00000531290 NUP155O75694 1391 aa33.94■■■■□ 3.02
TRAPPC4-210ENST00000531290 ADGRB3O60242 1522 aa33.93■■■■□ 3.02
TRAPPC4-210ENST00000531290 KDM5AP29375 1690 aaKnown RBP33.93■■■■□ 3.02
TRAPPC4-210ENST00000531290 CHGAP10645 457 aaKnown RBP33.92■■■■□ 3.02
TRAPPC4-210ENST00000531290 KCNA6P17658 529 aa33.91■■■■□ 3.02
TRAPPC4-210ENST00000531290 PPP1R15AO75807 674 aaPredicted RBP33.9■■■■□ 3.02
TRAPPC4-210ENST00000531290 TET3O43151 1660 aa33.9■■■■□ 3.02
TRAPPC4-210ENST00000531290 UNC13BO14795 1591 aa33.89■■■■□ 3.02
TRAPPC4-210ENST00000531290 STRCP1A6NGW2 1772 aa33.88■■■■□ 3.01
TRAPPC4-210ENST00000531290 SENP3Q9H4L4 574 aaPredicted RBP33.86■■■■□ 3.01
TRAPPC4-210ENST00000531290 PROSER2Q86WR7 435 aaPredicted RBP33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms