RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 KDM5DQ9BY66 1539 aa26.24■■□□□ 1.79
GSDMD-210ENST00000531173 TSPY4P0CV99 314 aa26.24■■□□□ 1.79
GSDMD-210ENST00000531173 TSPY10P0CW01 314 aa26.24■■□□□ 1.79
GSDMD-210ENST00000531173 RNF17Q9BXT8 1623 aaKnown RBP26.22■■□□□ 1.79
GSDMD-210ENST00000531173 PZPP20742 1482 aa26.2■■□□□ 1.78
GSDMD-210ENST00000531173 PLA2R1Q13018 1463 aa26.2■■□□□ 1.78
GSDMD-210ENST00000531173 EIF2AK4Q9P2K8 1649 aaKnown RBP26.17■■□□□ 1.78
GSDMD-210ENST00000531173 TCOF1Q13428 1488 aaKnown RBP26.17■■□□□ 1.78
GSDMD-210ENST00000531173 LTBP4Q8N2S1 1624 aa26.17■■□□□ 1.78
GSDMD-210ENST00000531173 CROCC2H7BZ55 1655 aa26.16■■□□□ 1.78
GSDMD-210ENST00000531173 MROH1Q8NDA8 1641 aa26.16■■□□□ 1.78
GSDMD-210ENST00000531173 PTPN23Q9H3S7 1636 aa26.16■■□□□ 1.78
GSDMD-210ENST00000531173 A2ML1A8K2U0 1454 aa26.16■■□□□ 1.78
GSDMD-210ENST00000531173 DNMT1P26358 1616 aaKnown RBP26.15■■□□□ 1.78
GSDMD-210ENST00000531173 FBXO31Q5XUX0 539 aaPredicted RBP26.15■■□□□ 1.78
GSDMD-210ENST00000531173 SHANK2Q9UPX8 1470 aa26.14■■□□□ 1.78
GSDMD-210ENST00000531173 ABCC5O15440 1437 aa26.14■■□□□ 1.77
GSDMD-210ENST00000531173 WASHC2CQ9Y4E1 1318 aa26.14■■□□□ 1.77
GSDMD-210ENST00000531173 ABCC3O15438 1527 aa26.13■■□□□ 1.77
GSDMD-210ENST00000531173 FGD6Q6ZV73 1430 aa26.12■■□□□ 1.77
GSDMD-210ENST00000531173 TNRQ92752 1358 aa26.11■■□□□ 1.77
GSDMD-210ENST00000531173 ZC3H13Q5T200 1668 aaKnown RBP26.11■■□□□ 1.77
GSDMD-210ENST00000531173 NCKAP5LQ9HCH0 1330 aa26.11■■□□□ 1.77
GSDMD-210ENST00000531173 DUOX2Q9NRD8 1548 aa26.1■■□□□ 1.77
GSDMD-210ENST00000531173 APLP2Q06481 763 aa26.1■■□□□ 1.77
GSDMD-210ENST00000531173 PKD2Q13563 968 aa26.08■■□□□ 1.77
GSDMD-210ENST00000531173 DAPK1P53355 1430 aa26.06■■□□□ 1.76
GSDMD-210ENST00000531173 KIF15Q9NS87 1388 aa26.05■■□□□ 1.76
GSDMD-210ENST00000531173 NLRP1Q9C000 1473 aa26.04■■□□□ 1.76
GSDMD-210ENST00000531173 SPATA31D1Q6ZQQ2 1576 aa26.03■■□□□ 1.76
GSDMD-210ENST00000531173 PRDM15P57071 1507 aaPredicted RBP26.03■■□□□ 1.76
GSDMD-210ENST00000531173 CEP152O94986 1710 aa26.02■■□□□ 1.76
GSDMD-210ENST00000531173 ERBINQ96RT1 1412 aa26.02■■□□□ 1.76
GSDMD-210ENST00000531173 NEURL4Q96JN8 1562 aa26.02■■□□□ 1.76
GSDMD-210ENST00000531173 POLR1AO95602 1720 aaPredicted RBP26.01■■□□□ 1.75
GSDMD-210ENST00000531173 IQSEC2Q5JU85 1478 aa26.01■■□□□ 1.75
GSDMD-210ENST00000531173 DEPDC5O75140 1603 aa26■■□□□ 1.75
GSDMD-210ENST00000531173 ERVK-7P63135 1459 aa25.98■■□□□ 1.75
GSDMD-210ENST00000531173 ZNF335Q9H4Z2 1342 aaPredicted RBP25.98■■□□□ 1.75
GSDMD-210ENST00000531173 RRP7BPQ9NSQ0 103 aa25.97■■□□□ 1.75
GSDMD-210ENST00000531173 UGGT1Q9NYU2 1555 aa25.95■■□□□ 1.75
GSDMD-210ENST00000531173 CFAP65Q6ZU64 1925 aaKnown RBP25.95■■□□□ 1.74
GSDMD-210ENST00000531173 ARHGAP31Q2M1Z3 1444 aa25.94■■□□□ 1.74
GSDMD-210ENST00000531173 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.94■■□□□ 1.74
GSDMD-210ENST00000531173 ADGRL2O95490 1459 aa25.92■■□□□ 1.74
GSDMD-210ENST00000531173 VWDEQ8N2E2 1590 aa25.91■■□□□ 1.74
GSDMD-210ENST00000531173 ANKRD30AQ9BXX3 1397 aa25.91■■□□□ 1.74
GSDMD-210ENST00000531173 MED14O60244 1454 aa25.91■■□□□ 1.74
GSDMD-210ENST00000531173 THEMISQ8N1K5 641 aaPredicted RBP25.9■■□□□ 1.74
GSDMD-210ENST00000531173 CHIC2Q9UKJ5 165 aa25.88■■□□□ 1.73
GSDMD-210ENST00000531173 UBR1Q8IWV7 1749 aa25.87■■□□□ 1.73
GSDMD-210ENST00000531173 LMTK2Q8IWU2 1503 aa25.87■■□□□ 1.73
GSDMD-210ENST00000531173 ANKLE2Q86XL3 938 aa25.86■■□□□ 1.73
GSDMD-210ENST00000531173 NPHP4O75161 1426 aaPredicted RBP25.82■■□□□ 1.72
GSDMD-210ENST00000531173 IQGAP1P46940 1657 aa25.81■■□□□ 1.72
GSDMD-210ENST00000531173 ARHGAP23Q9P227 1491 aa25.79■■□□□ 1.72
GSDMD-210ENST00000531173 FAM50AQ14320 339 aaKnown RBP25.79■■□□□ 1.72
GSDMD-210ENST00000531173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.79■■□□□ 1.723e-6■■■□□ 14.8
GSDMD-210ENST00000531173 CPS1P31327 1500 aa25.78■■□□□ 1.72
GSDMD-210ENST00000531173 KANK1Q14678 1352 aa25.78■■□□□ 1.72
GSDMD-210ENST00000531173 SLIT1O75093 1534 aa25.78■■□□□ 1.72
GSDMD-210ENST00000531173 EFCAB6Q5THR3 1501 aa25.77■■□□□ 1.72
GSDMD-210ENST00000531173 ANKRD50Q9ULJ7 1429 aa25.76■■□□□ 1.71
GSDMD-210ENST00000531173 PIK3C2BO00750 1634 aa25.76■■□□□ 1.71
GSDMD-210ENST00000531173 SYNMO15061 1565 aa25.74■■□□□ 1.71
GSDMD-210ENST00000531173 STRCP1A6NGW2 1772 aa25.74■■□□□ 1.71
GSDMD-210ENST00000531173 KDM5AP29375 1690 aaKnown RBP25.74■■□□□ 1.71
GSDMD-210ENST00000531173 NOS1P29475 1434 aa25.73■■□□□ 1.71
GSDMD-210ENST00000531173 SCAF11Q99590 1463 aaKnown RBP25.72■■□□□ 1.71
GSDMD-210ENST00000531173 LTKP29376 864 aa25.7■■□□□ 1.7
GSDMD-210ENST00000531173 UBAP1LF5GYI3 381 aa25.69■■□□□ 1.7
GSDMD-210ENST00000531173 ROCK1Q13464 1354 aa25.69■■□□□ 1.7
GSDMD-210ENST00000531173 UNC13BO14795 1591 aa25.68■■□□□ 1.7
GSDMD-210ENST00000531173 IDI1Q13907 227 aa25.67■■□□□ 1.7
GSDMD-210ENST00000531173 TMEM2Q9UHN6 1383 aa25.67■■□□□ 1.7
GSDMD-210ENST00000531173 RPRD2Q5VT52 1461 aaKnown RBP25.66■■□□□ 1.7
GSDMD-210ENST00000531173 TET3O43151 1660 aa25.66■■□□□ 1.7
GSDMD-210ENST00000531173 ALKQ9UM73 1620 aa25.65■■□□□ 1.7
GSDMD-210ENST00000531173 TXNDC2Q86VQ3 553 aa25.63■■□□□ 1.69
GSDMD-210ENST00000531173 LRRC7Q96NW7 1537 aa25.62■■□□□ 1.69
GSDMD-210ENST00000531173 GCC2Q8IWJ2 1684 aa25.61■■□□□ 1.69
GSDMD-210ENST00000531173 ADGRB3O60242 1522 aa25.61■■□□□ 1.69
GSDMD-210ENST00000531173 SLC52A1Q9NWF4 448 aa25.58■■□□□ 1.69
GSDMD-210ENST00000531173 IQGAP3Q86VI3 1631 aa25.57■■□□□ 1.68
GSDMD-210ENST00000531173 PPARGC1BQ86YN6 1023 aaKnown RBP25.57■■□□□ 1.68
GSDMD-210ENST00000531173 E9PCH4 1651 aa25.56■■□□□ 1.68
GSDMD-210ENST00000531173 EID1Q9Y6B2 187 aa25.56■■□□□ 1.68
GSDMD-210ENST00000531173 MYO5BQ9ULV0 1848 aa25.55■■□□□ 1.68
GSDMD-210ENST00000531173 XIRP1Q702N8 1843 aaKnown RBP25.54■■□□□ 1.68
GSDMD-210ENST00000531173 TOM1O60784 492 aa25.53■■□□□ 1.68
GSDMD-210ENST00000531173 STAG3Q9UJ98 1225 aa25.53■■□□□ 1.68
GSDMD-210ENST00000531173 DISP3Q9P2K9 1392 aa25.52■■□□□ 1.68
GSDMD-210ENST00000531173 TMEM131LA2VDJ0 1609 aa25.52■■□□□ 1.68
GSDMD-210ENST00000531173 ZFYVE9O95405 1425 aa25.51■■□□□ 1.67
GSDMD-210ENST00000531173 RRBP1Q9P2E9 1410 aaKnown RBP25.5■■□□□ 1.67
GSDMD-210ENST00000531173 PIP4K2BP78356 416 aa25.48■■□□□ 1.67
GSDMD-210ENST00000531173 HSPA1LP34931 641 aa25.47■■□□□ 1.67
GSDMD-210ENST00000531173 ITGAEP38570 1179 aa25.46■■□□□ 1.67
GSDMD-210ENST00000531173 NUP155O75694 1391 aa25.44■■□□□ 1.66
GSDMD-210ENST00000531173 ILDR2Q71H61 639 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms