RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 SYNMO15061 1565 aa8.71□□□□□ -1.02
VPS11-204ENST00000530809 SCAF1Q9H7N4 1312 aaKnown RBP8.71□□□□□ -1.02
VPS11-204ENST00000530809 KDM5DQ9BY66 1539 aa8.7□□□□□ -1.02
VPS11-204ENST00000530809 RNF17Q9BXT8 1623 aaKnown RBP8.7□□□□□ -1.02
VPS11-204ENST00000530809 IQGAP1P46940 1657 aa8.7□□□□□ -1.02
VPS11-204ENST00000530809 HSPA1LP34931 641 aa8.7□□□□□ -1.02
VPS11-204ENST00000530809 ZNF777Q9ULD5 760 aaPredicted RBP8.7□□□□□ -1.02
VPS11-204ENST00000530809 VWDEQ8N2E2 1590 aa8.69□□□□□ -1.02
VPS11-204ENST00000530809 HNRNPMP52272 730 aaKnown RBP eCLIP8.69□□□□□ -1.02
VPS11-204ENST00000530809 GGT6Q6P531 493 aa8.69□□□□□ -1.02
VPS11-204ENST00000530809 RTEL1-TNFRSF6BF6WH68 1400 aa8.69□□□□□ -1.02
VPS11-204ENST00000530809 PZPP20742 1482 aa8.69□□□□□ -1.02
VPS11-204ENST00000530809 MSH5O43196 834 aa8.68□□□□□ -1.02
VPS11-204ENST00000530809 PIP4K2BP78356 416 aa8.68□□□□□ -1.02
VPS11-204ENST00000530809 CCNB3Q8WWL7 1395 aa8.68□□□□□ -1.02
VPS11-204ENST00000530809 MED14O60244 1454 aa8.68□□□□□ -1.02
VPS11-204ENST00000530809 NLRP1Q9C000 1473 aa8.68□□□□□ -1.02
VPS11-204ENST00000530809 UGGT1Q9NYU2 1555 aa8.68□□□□□ -1.02
VPS11-204ENST00000530809 ALKQ9UM73 1620 aa8.68□□□□□ -1.02
VPS11-204ENST00000530809 ZC3H13Q5T200 1668 aaKnown RBP8.68□□□□□ -1.02
VPS11-204ENST00000530809 STRCP1A6NGW2 1772 aa8.67□□□□□ -1.02
VPS11-204ENST00000530809 TIAM1Q13009 1591 aa8.67□□□□□ -1.02
VPS11-204ENST00000530809 TNRQ92752 1358 aa8.67□□□□□ -1.02
VPS11-204ENST00000530809 CFDP1Q9UEE9 299 aaPredicted RBP8.67□□□□□ -1.02
VPS11-204ENST00000530809 ANKLE2Q86XL3 938 aa8.66□□□□□ -1.02
VPS11-204ENST00000530809 EHMT2Q96KQ7 1210 aa8.66□□□□□ -1.02
VPS11-204ENST00000530809 NPHP4O75161 1426 aaPredicted RBP8.65□□□□□ -1.02
VPS11-204ENST00000530809 DHX29Q7Z478 1369 aaKnown RBP8.65□□□□□ -1.02
VPS11-204ENST00000530809 NCBP3Q53F19 620 aaKnown RBP8.65□□□□□ -1.02
VPS11-204ENST00000530809 THEMISQ8N1K5 641 aaPredicted RBP8.65□□□□□ -1.02
VPS11-204ENST00000530809 EHBP1L1Q8N3D4 1523 aa8.64□□□□□ -1.03
VPS11-204ENST00000530809 MTUS2Q5JR59 1369 aa8.64□□□□□ -1.03
VPS11-204ENST00000530809 MBD5Q9P267 1494 aa8.64□□□□□ -1.03
VPS11-204ENST00000530809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.63□□□□□ -1.03
VPS11-204ENST00000530809 XIRP1Q702N8 1843 aaKnown RBP8.63□□□□□ -1.03
VPS11-204ENST00000530809 CCDC141Q6ZP82 1450 aa8.63□□□□□ -1.03
VPS11-204ENST00000530809 UBR1Q8IWV7 1749 aa8.63□□□□□ -1.03
VPS11-204ENST00000530809 MIA2Q96PC5 1412 aa8.63□□□□□ -1.03
VPS11-204ENST00000530809 EIF2AK4Q9P2K8 1649 aaKnown RBP8.62□□□□□ -1.03
VPS11-204ENST00000530809 LRRC7Q96NW7 1537 aa8.62□□□□□ -1.03
VPS11-204ENST00000530809 KIF3BO15066 747 aa8.61□□□□□ -1.03
VPS11-204ENST00000530809 ARHGEF5Q12774 1597 aa8.61□□□□□ -1.03
VPS11-204ENST00000530809 WASHC2CQ9Y4E1 1318 aa8.6□□□□□ -1.03
VPS11-204ENST00000530809 RSPH4AQ5TD94 716 aa8.6□□□□□ -1.03
VPS11-204ENST00000530809 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
VPS11-204ENST00000530809 CEP162Q5TB80 1403 aa8.6□□□□□ -1.03
VPS11-204ENST00000530809 CFAP65Q6ZU64 1925 aaKnown RBP8.6□□□□□ -1.03
VPS11-204ENST00000530809 CEP152O94986 1710 aa8.6□□□□□ -1.03
VPS11-204ENST00000530809 CAMSAP2Q08AD1 1489 aa8.59□□□□□ -1.03
VPS11-204ENST00000530809 KDM5AP29375 1690 aaKnown RBP8.58□□□□□ -1.04
VPS11-204ENST00000530809 ABCC3O15438 1527 aa8.58□□□□□ -1.04
VPS11-204ENST00000530809 SCAF11Q99590 1463 aaKnown RBP8.57□□□□□ -1.04
VPS11-204ENST00000530809 ZNF644Q9H582 1327 aaPredicted RBP8.57□□□□□ -1.04
VPS11-204ENST00000530809 MAST1Q9Y2H9 1570 aa8.57□□□□□ -1.04
VPS11-204ENST00000530809 ERVK-7P63135 1459 aa8.57□□□□□ -1.04
VPS11-204ENST00000530809 SLIT1O75093 1534 aa8.56□□□□□ -1.04
VPS11-204ENST00000530809 ROBO1Q9Y6N7 1651 aa8.56□□□□□ -1.04
VPS11-204ENST00000530809 MROH1Q8NDA8 1641 aa8.55□□□□□ -1.04
VPS11-204ENST00000530809 ARHGAP23Q9P227 1491 aa8.55□□□□□ -1.04
VPS11-204ENST00000530809 FAM135BQ49AJ0 1406 aa8.54□□□□□ -1.04
VPS11-204ENST00000530809 NCOA2Q15596 1464 aa8.54□□□□□ -1.04
VPS11-204ENST00000530809 LRRC9Q6ZRR7 1453 aa8.54□□□□□ -1.04
VPS11-204ENST00000530809 RGS17Q9UGC6 210 aaPredicted RBP8.54□□□□□ -1.04
VPS11-204ENST00000530809 SETD1AO15047 1707 aaKnown RBP8.54□□□□□ -1.04
VPS11-204ENST00000530809 TSPY4P0CV99 314 aa8.53□□□□□ -1.04
VPS11-204ENST00000530809 TSPY10P0CW01 314 aa8.53□□□□□ -1.04
VPS11-204ENST00000530809 PHLPP1O60346 1717 aa8.53□□□□□ -1.04
VPS11-204ENST00000530809 PIK3C2BO00750 1634 aa8.53□□□□□ -1.04
VPS11-204ENST00000530809 PRDM15P57071 1507 aaPredicted RBP8.52□□□□□ -1.05
VPS11-204ENST00000530809 DUOX2Q9NRD8 1548 aa8.51□□□□□ -1.05
VPS11-204ENST00000530809 CROCC2H7BZ55 1655 aa8.51□□□□□ -1.05
VPS11-204ENST00000530809 EID1Q9Y6B2 187 aa8.51□□□□□ -1.05
VPS11-204ENST00000530809 ARHGAP31Q2M1Z3 1444 aa8.51□□□□□ -1.05
VPS11-204ENST00000530809 NWD1Q149M9 1564 aa8.51□□□□□ -1.05
VPS11-204ENST00000530809 NKTRP30414 1462 aaKnown RBP8.51□□□□□ -1.05
VPS11-204ENST00000530809 MAP3K1Q13233 1512 aa8.49□□□□□ -1.05
VPS11-204ENST00000530809 POTEAQ6S8J7 498 aa8.49□□□□□ -1.05
VPS11-204ENST00000530809 TXNDC2Q86VQ3 553 aa8.49□□□□□ -1.05
VPS11-204ENST00000530809 CNKSR2Q8WXI2 1034 aa8.49□□□□□ -1.05
VPS11-204ENST00000530809 EFCAB6Q5THR3 1501 aa8.49□□□□□ -1.05
VPS11-204ENST00000530809 CHD2O14647 1828 aaKnown RBP8.48□□□□□ -1.05
VPS11-204ENST00000530809 NPM3O75607 178 aaKnown RBP8.48□□□□□ -1.05
VPS11-204ENST00000530809 TMEM94Q12767 1356 aa8.48□□□□□ -1.05
VPS11-204ENST00000530809 TMEM2Q9UHN6 1383 aa8.48□□□□□ -1.05
VPS11-204ENST00000530809 TET3O43151 1660 aa8.47□□□□□ -1.05
VPS11-204ENST00000530809 LTKP29376 864 aa8.47□□□□□ -1.05
VPS11-204ENST00000530809 SLC4A1APQ9BWU0 796 aaKnown RBP8.47□□□□□ -1.05
VPS11-204ENST00000530809 COL16A1Q07092 1604 aaPredicted RBP8.47□□□□□ -1.05
VPS11-204ENST00000530809 SHPRHQ149N8 1683 aa8.46□□□□□ -1.05
VPS11-204ENST00000530809 ERBINQ96RT1 1412 aa8.46□□□□□ -1.05
VPS11-204ENST00000530809 MSH6P52701 1360 aa8.46□□□□□ -1.06
VPS11-204ENST00000530809 JCADQ9P266 1359 aa8.46□□□□□ -1.06
VPS11-204ENST00000530809 ADGRB3O60242 1522 aa8.45□□□□□ -1.06
VPS11-204ENST00000530809 KCNA6P17658 529 aa8.45□□□□□ -1.06
VPS11-204ENST00000530809 KANK1Q14678 1352 aa8.45□□□□□ -1.06
VPS11-204ENST00000530809 MYO5BQ9ULV0 1848 aa8.45□□□□□ -1.06
VPS11-204ENST00000530809 MYOM3Q5VTT5 1437 aa8.45□□□□□ -1.06
VPS11-204ENST00000530809 FGD6Q6ZV73 1430 aa8.45□□□□□ -1.06
VPS11-204ENST00000530809 LMTK2Q8IWU2 1503 aa8.44□□□□□ -1.06
VPS11-204ENST00000530809 PROSER2Q86WR7 435 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms