RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 CAMSAP2Q08AD1 1489 aa7.49□□□□□ -1.21
SSBP3-213ENST00000530618 NCOA2Q15596 1464 aa7.49□□□□□ -1.21
SSBP3-213ENST00000530618 MAST1Q9Y2H9 1570 aa7.49□□□□□ -1.21
SSBP3-213ENST00000530618 CCNB3Q8WWL7 1395 aa7.48□□□□□ -1.21
SSBP3-213ENST00000530618 FAM135AQ9P2D6 1515 aa7.48□□□□□ -1.21
SSBP3-213ENST00000530618 STRCP1A6NGW2 1772 aa7.48□□□□□ -1.21
SSBP3-213ENST00000530618 ALKQ9UM73 1620 aa7.48□□□□□ -1.21
SSBP3-213ENST00000530618 CCDC141Q6ZP82 1450 aa7.48□□□□□ -1.21
SSBP3-213ENST00000530618 MTUS2Q5JR59 1369 aa7.47□□□□□ -1.21
SSBP3-213ENST00000530618 ADRA2BP18089 450 aa7.47□□□□□ -1.21
SSBP3-213ENST00000530618 CFDP1Q9UEE9 299 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-213ENST00000530618 ZNF777Q9ULD5 760 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-213ENST00000530618 CROCC2H7BZ55 1655 aa7.47□□□□□ -1.21
SSBP3-213ENST00000530618 KDM5DQ9BY66 1539 aa7.47□□□□□ -1.21
SSBP3-213ENST00000530618 CEP152O94986 1710 aa7.47□□□□□ -1.21
SSBP3-213ENST00000530618 EIF2AK4Q9P2K8 1649 aaKnown RBP7.46□□□□□ -1.21
SSBP3-213ENST00000530618 A2ML1A8K2U0 1454 aa7.46□□□□□ -1.22
SSBP3-213ENST00000530618 PZPP20742 1482 aa7.46□□□□□ -1.22
SSBP3-213ENST00000530618 ZC3H13Q5T200 1668 aaKnown RBP7.46□□□□□ -1.22
SSBP3-213ENST00000530618 SPATA31D1Q6ZQQ2 1576 aa7.46□□□□□ -1.22
SSBP3-213ENST00000530618 VWDEQ8N2E2 1590 aa7.46□□□□□ -1.22
SSBP3-213ENST00000530618 DHX29Q7Z478 1369 aaKnown RBP7.46□□□□□ -1.22
SSBP3-213ENST00000530618 VPS8Q8N3P4 1428 aa7.45□□□□□ -1.22
SSBP3-213ENST00000530618 LRRC9Q6ZRR7 1453 aa7.45□□□□□ -1.22
SSBP3-213ENST00000530618 DEPDC5O75140 1603 aa7.45□□□□□ -1.22
SSBP3-213ENST00000530618 CFAP65Q6ZU64 1925 aaKnown RBP7.44□□□□□ -1.22
SSBP3-213ENST00000530618 ABCC3O15438 1527 aa7.44□□□□□ -1.22
SSBP3-213ENST00000530618 MAP3K1Q13233 1512 aa7.44□□□□□ -1.22
SSBP3-213ENST00000530618 MYT1LQ9UL68 1186 aa7.44□□□□□ -1.22
SSBP3-213ENST00000530618 NCKAP5LQ9HCH0 1330 aa7.44□□□□□ -1.22
SSBP3-213ENST00000530618 UBR1Q8IWV7 1749 aa7.44□□□□□ -1.22
SSBP3-213ENST00000530618 XIRP1Q702N8 1843 aaKnown RBP7.43□□□□□ -1.22
SSBP3-213ENST00000530618 ILDR2Q71H61 639 aa7.43□□□□□ -1.22
SSBP3-213ENST00000530618 ZNF335Q9H4Z2 1342 aaPredicted RBP7.43□□□□□ -1.22
SSBP3-213ENST00000530618 SP7Q8TDD2 431 aaPredicted RBP7.42□□□□□ -1.22
SSBP3-213ENST00000530618 MED14O60244 1454 aa7.42□□□□□ -1.22
SSBP3-213ENST00000530618 IQGAP1P46940 1657 aa7.41□□□□□ -1.22
SSBP3-213ENST00000530618 FBXO31Q5XUX0 539 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-213ENST00000530618 GGT6Q6P531 493 aa7.41□□□□□ -1.22
SSBP3-213ENST00000530618 TNRQ92752 1358 aa7.41□□□□□ -1.22
SSBP3-213ENST00000530618 PRDM15P57071 1507 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-213ENST00000530618 ERVK-7P63135 1459 aa7.4□□□□□ -1.22
SSBP3-213ENST00000530618 NLRP1Q9C000 1473 aa7.4□□□□□ -1.22
SSBP3-213ENST00000530618 UGGT1Q9NYU2 1555 aa7.39□□□□□ -1.23
SSBP3-213ENST00000530618 CPS1P31327 1500 aa7.39□□□□□ -1.23
SSBP3-213ENST00000530618 MYOM3Q5VTT5 1437 aa7.39□□□□□ -1.23
SSBP3-213ENST00000530618 PKD2Q13563 968 aa7.39□□□□□ -1.23
SSBP3-213ENST00000530618 ESF1Q9H501 851 aaKnown RBP7.39□□□□□ -1.23
SSBP3-213ENST00000530618 PTPN23Q9H3S7 1636 aa7.38□□□□□ -1.23
SSBP3-213ENST00000530618 SYNMO15061 1565 aa7.38□□□□□ -1.23
SSBP3-213ENST00000530618 SHANK2Q9UPX8 1470 aa7.38□□□□□ -1.23
SSBP3-213ENST00000530618 MIA2Q96PC5 1412 aa7.38□□□□□ -1.23
SSBP3-213ENST00000530618 KANK4Q5T7N3 995 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-213ENST00000530618 KDM5AP29375 1690 aaKnown RBP7.38□□□□□ -1.23
SSBP3-213ENST00000530618 DUOX2Q9NRD8 1548 aa7.37□□□□□ -1.23
SSBP3-213ENST00000530618 ARHGAP23Q9P227 1491 aa7.37□□□□□ -1.23
SSBP3-213ENST00000530618 KIF3BO15066 747 aa7.37□□□□□ -1.23
SSBP3-213ENST00000530618 PIK3C2BO00750 1634 aa7.37□□□□□ -1.23
SSBP3-213ENST00000530618 MED1Q15648 1581 aaPredicted RBP7.37□□□□□ -1.23
SSBP3-213ENST00000530618 SLIT1O75093 1534 aa7.37□□□□□ -1.23
SSBP3-213ENST00000530618 ABCC5O15440 1437 aa7.36□□□□□ -1.23
SSBP3-213ENST00000530618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.36□□□□□ -1.23
SSBP3-213ENST00000530618 DISP3Q9P2K9 1392 aa7.36□□□□□ -1.23
SSBP3-213ENST00000530618 MYO5BQ9ULV0 1848 aa7.36□□□□□ -1.23
SSBP3-213ENST00000530618 NPHP4O75161 1426 aaPredicted RBP7.35□□□□□ -1.23
SSBP3-213ENST00000530618 ARHGAP31Q2M1Z3 1444 aa7.35□□□□□ -1.23
SSBP3-213ENST00000530618 RSPH4AQ5TD94 716 aa7.35□□□□□ -1.23
SSBP3-213ENST00000530618 LMTK2Q8IWU2 1503 aa7.35□□□□□ -1.23
SSBP3-213ENST00000530618 LRRC7Q96NW7 1537 aa7.35□□□□□ -1.23
SSBP3-213ENST00000530618 ERBINQ96RT1 1412 aa7.34□□□□□ -1.23
SSBP3-213ENST00000530618 WASHC2CQ9Y4E1 1318 aa7.33□□□□□ -1.24
SSBP3-213ENST00000530618 EFCAB6Q5THR3 1501 aa7.33□□□□□ -1.24
SSBP3-213ENST00000530618 UBAP1LF5GYI3 381 aa7.33□□□□□ -1.24
SSBP3-213ENST00000530618 SOCS7O14512 581 aa7.33□□□□□ -1.24
SSBP3-213ENST00000530618 DAPK1P53355 1430 aa7.33□□□□□ -1.24
SSBP3-213ENST00000530618 FGD6Q6ZV73 1430 aa7.33□□□□□ -1.24
SSBP3-213ENST00000530618 TET3O43151 1660 aa7.32□□□□□ -1.24
SSBP3-213ENST00000530618 ADGRL2O95490 1459 aa7.32□□□□□ -1.24
SSBP3-213ENST00000530618 KIF15Q9NS87 1388 aa7.32□□□□□ -1.24
SSBP3-213ENST00000530618 SCAF11Q99590 1463 aaKnown RBP7.31□□□□□ -1.24
SSBP3-213ENST00000530618 MAPK8IP2Q13387 824 aaPredicted RBP7.31□□□□□ -1.24
SSBP3-213ENST00000530618 NWD1Q149M9 1564 aa7.31□□□□□ -1.24
SSBP3-213ENST00000530618 NOS1P29475 1434 aa7.3□□□□□ -1.24
SSBP3-213ENST00000530618 HSPA1LP34931 641 aa7.3□□□□□ -1.24
SSBP3-213ENST00000530618 THEMISQ8N1K5 641 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-213ENST00000530618 GCC2Q8IWJ2 1684 aa7.3□□□□□ -1.24
SSBP3-213ENST00000530618 ADGRB3O60242 1522 aa7.3□□□□□ -1.24
SSBP3-213ENST00000530618 UNC13BO14795 1591 aa7.29□□□□□ -1.24
SSBP3-213ENST00000530618 CHD2O14647 1828 aaKnown RBP7.29□□□□□ -1.24
SSBP3-213ENST00000530618 TSPY4P0CV99 314 aa7.29□□□□□ -1.24
SSBP3-213ENST00000530618 TSPY10P0CW01 314 aa7.29□□□□□ -1.24
SSBP3-213ENST00000530618 LTKP29376 864 aa7.29□□□□□ -1.24
SSBP3-213ENST00000530618 ANKLE2Q86XL3 938 aa7.29□□□□□ -1.24
SSBP3-213ENST00000530618 TMEM131LA2VDJ0 1609 aa7.28□□□□□ -1.24
SSBP3-213ENST00000530618 E9PCH4 1651 aa7.28□□□□□ -1.24
SSBP3-213ENST00000530618 TMEM2Q9UHN6 1383 aa7.27□□□□□ -1.25
SSBP3-213ENST00000530618 ZFYVE9O95405 1425 aa7.27□□□□□ -1.25
SSBP3-213ENST00000530618 ROBO1Q9Y6N7 1651 aa7.26□□□□□ -1.25
SSBP3-213ENST00000530618 IQGAP3Q86VI3 1631 aa7.26□□□□□ -1.25
SSBP3-213ENST00000530618 NRXN3Q9Y4C0 1643 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms