RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 NPATQ14207 1427 aa26.28■■□□□ 1.8
CCS-205ENST00000530384 RNF17Q9BXT8 1623 aaKnown RBP26.28■■□□□ 1.8
CCS-205ENST00000530384 PPARGC1BQ86YN6 1023 aaKnown RBP26.27■■□□□ 1.8
CCS-205ENST00000530384 ANKRD30AQ9BXX3 1397 aa26.27■■□□□ 1.8
CCS-205ENST00000530384 UHRF1BP1Q6BDS2 1440 aa26.27■■□□□ 1.8
CCS-205ENST00000530384 KDM5DQ9BY66 1539 aa26.27■■□□□ 1.8
CCS-205ENST00000530384 RRP7BPQ9NSQ0 103 aa26.25■■□□□ 1.79
CCS-205ENST00000530384 ERBINQ96RT1 1412 aa26.24■■□□□ 1.79
CCS-205ENST00000530384 CHIC2Q9UKJ5 165 aa26.24■■□□□ 1.79
CCS-205ENST00000530384 WASHC2CQ9Y4E1 1318 aa26.23■■□□□ 1.79
CCS-205ENST00000530384 HSPA2P54652 639 aa26.22■■□□□ 1.79
CCS-205ENST00000530384 ADGRL2O95490 1459 aa26.22■■□□□ 1.79
CCS-205ENST00000530384 NCOA1Q15788 1441 aa26.21■■□□□ 1.79
CCS-205ENST00000530384 PTPRKQ15262 1439 aa26.2■■□□□ 1.78
CCS-205ENST00000530384 ZC3H13Q5T200 1668 aaKnown RBP26.19■■□□□ 1.78
CCS-205ENST00000530384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.18■■□□□ 1.78
CCS-205ENST00000530384 MROH1Q8NDA8 1641 aa26.17■■□□□ 1.78
CCS-205ENST00000530384 PZPP20742 1482 aa26.15■■□□□ 1.78
CCS-205ENST00000530384 ABCC3O15438 1527 aa26.14■■□□□ 1.78
CCS-205ENST00000530384 PRDM15P57071 1507 aaPredicted RBP26.13■■□□□ 1.77
CCS-205ENST00000530384 DEPDC5O75140 1603 aa26.12■■□□□ 1.77
CCS-205ENST00000530384 MYO3AQ8NEV4 1616 aa26.11■■□□□ 1.77
CCS-205ENST00000530384 ILDR1Q86SU0 546 aaPredicted RBP26.1■■□□□ 1.77
CCS-205ENST00000530384 CEP152O94986 1710 aa26.1■■□□□ 1.77
CCS-205ENST00000530384 ZNF142P52746 1687 aaPredicted RBP26.09■■□□□ 1.77
CCS-205ENST00000530384 RRBP1Q9P2E9 1410 aaKnown RBP26.09■■□□□ 1.77
CCS-205ENST00000530384 ROCK1Q13464 1354 aa26.08■■□□□ 1.77
CCS-205ENST00000530384 KANK1Q14678 1352 aa26.07■■□□□ 1.76
CCS-205ENST00000530384 ANKRD50Q9ULJ7 1429 aa26.07■■□□□ 1.76
CCS-205ENST00000530384 TNRQ92752 1358 aa26.07■■□□□ 1.76
CCS-205ENST00000530384 CAMSAP1Q5T5Y3 1602 aa26.06■■□□□ 1.76
CCS-205ENST00000530384 FBXO31Q5XUX0 539 aaPredicted RBP26.06■■□□□ 1.76
CCS-205ENST00000530384 CEP170BQ9Y4F5 1589 aaPredicted RBP26.06■■□□□ 1.76
CCS-205ENST00000530384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.05■■□□□ 1.764e-7■■■□□ 17.7
CCS-205ENST00000530384 ITGAEP38570 1179 aa26.03■■□□□ 1.76
CCS-205ENST00000530384 STRCQ7RTU9 1775 aa26.02■■□□□ 1.76
CCS-205ENST00000530384 A2ML1A8K2U0 1454 aa26.02■■□□□ 1.76
CCS-205ENST00000530384 SPATA31D1Q6ZQQ2 1576 aa26■■□□□ 1.75
CCS-205ENST00000530384 VWDEQ8N2E2 1590 aa26■■□□□ 1.75
CCS-205ENST00000530384 ARHGAP31Q2M1Z3 1444 aa26■■□□□ 1.75
CCS-205ENST00000530384 DMRT2Q9Y5R5 561 aa26■■□□□ 1.75
CCS-205ENST00000530384 LMTK2Q8IWU2 1503 aa25.98■■□□□ 1.75
CCS-205ENST00000530384 ERVK-7P63135 1459 aa25.98■■□□□ 1.75
CCS-205ENST00000530384 NLRP1Q9C000 1473 aa25.98■■□□□ 1.75
CCS-205ENST00000530384 CFAP65Q6ZU64 1925 aaKnown RBP25.98■■□□□ 1.75
CCS-205ENST00000530384 PLA2R1Q13018 1463 aa25.96■■□□□ 1.75
CCS-205ENST00000530384 UNC13BO14795 1591 aa25.93■■□□□ 1.74
CCS-205ENST00000530384 PTPRTO14522 1441 aa25.92■■□□□ 1.74
CCS-205ENST00000530384 EFCAB6Q5THR3 1501 aa25.9■■□□□ 1.74
CCS-205ENST00000530384 PKD2Q13563 968 aa25.89■■□□□ 1.74
CCS-205ENST00000530384 UGGT1Q9NYU2 1555 aa25.89■■□□□ 1.73
CCS-205ENST00000530384 THEMISQ8N1K5 641 aaPredicted RBP25.87■■□□□ 1.73
CCS-205ENST00000530384 TET3O43151 1660 aa25.87■■□□□ 1.73
CCS-205ENST00000530384 NCKAP5LQ9HCH0 1330 aa25.85■■□□□ 1.73
CCS-205ENST00000530384 RPRD2Q5VT52 1461 aaKnown RBP25.85■■□□□ 1.73
CCS-205ENST00000530384 GCC2Q8IWJ2 1684 aa25.83■■□□□ 1.73
CCS-205ENST00000530384 IQGAP3Q86VI3 1631 aa25.82■■□□□ 1.72
CCS-205ENST00000530384 POLR1AO95602 1720 aaPredicted RBP25.81■■□□□ 1.72
CCS-205ENST00000530384 NUP155O75694 1391 aa25.8■■□□□ 1.72
CCS-205ENST00000530384 NOS1P29475 1434 aa25.8■■□□□ 1.72
CCS-205ENST00000530384 NAIPQ13075 1403 aa25.8■■□□□ 1.72
CCS-205ENST00000530384 UBR1Q8IWV7 1749 aa25.79■■□□□ 1.72
CCS-205ENST00000530384 ANKLE2Q86XL3 938 aa25.78■■□□□ 1.72
CCS-205ENST00000530384 HFM1A2PYH4 1435 aa25.77■■□□□ 1.72
CCS-205ENST00000530384 SYNMO15061 1565 aa25.77■■□□□ 1.72
CCS-205ENST00000530384 PIK3C2BO00750 1634 aa25.75■■□□□ 1.71
CCS-205ENST00000530384 E9PCH4 1651 aa25.74■■□□□ 1.71
CCS-205ENST00000530384 KDM5AP29375 1690 aaKnown RBP25.74■■□□□ 1.71
CCS-205ENST00000530384 NEURL4Q96JN8 1562 aa25.73■■□□□ 1.71
CCS-205ENST00000530384 FBXO41Q8TF61 875 aa25.73■■□□□ 1.71
CCS-205ENST00000530384 SLC52A1Q9NWF4 448 aa25.73■■□□□ 1.71
CCS-205ENST00000530384 IDI1Q13907 227 aa25.72■■□□□ 1.71
CCS-205ENST00000530384 STAG3Q9UJ98 1225 aa25.72■■□□□ 1.71
CCS-205ENST00000530384 CERKQ8TCT0 537 aa25.7■■□□□ 1.7
CCS-205ENST00000530384 MED14O60244 1454 aa25.7■■□□□ 1.7
CCS-205ENST00000530384 SLIT1O75093 1534 aa25.69■■□□□ 1.7
CCS-205ENST00000530384 ARHGAP23Q9P227 1491 aa25.67■■□□□ 1.7
CCS-205ENST00000530384 NPHP4O75161 1426 aaPredicted RBP25.67■■□□□ 1.7
CCS-205ENST00000530384 ADGRB3O60242 1522 aa25.66■■□□□ 1.7
CCS-205ENST00000530384 LTBP4Q8N2S1 1624 aa25.66■■□□□ 1.7
CCS-205ENST00000530384 SCAF11Q99590 1463 aaKnown RBP25.65■■□□□ 1.7
CCS-205ENST00000530384 IQGAP1P46940 1657 aa25.64■■□□□ 1.7
CCS-205ENST00000530384 TMEM2Q9UHN6 1383 aa25.64■■□□□ 1.69
CCS-205ENST00000530384 EID1Q9Y6B2 187 aa25.63■■□□□ 1.69
CCS-205ENST00000530384 ZNF335Q9H4Z2 1342 aaPredicted RBP25.63■■□□□ 1.69
CCS-205ENST00000530384 TXNDC2Q86VQ3 553 aa25.62■■□□□ 1.69
CCS-205ENST00000530384 TRIM52Q96A61 297 aa25.61■■□□□ 1.69
CCS-205ENST00000530384 LTKP29376 864 aa25.59■■□□□ 1.69
CCS-205ENST00000530384 SPHKAPQ2M3C7 1700 aa25.58■■□□□ 1.69
CCS-205ENST00000530384 MYO5BQ9ULV0 1848 aa25.56■■□□□ 1.68
CCS-205ENST00000530384 TMEM131LA2VDJ0 1609 aa25.56■■□□□ 1.68
CCS-205ENST00000530384 IQSEC2Q5JU85 1478 aa25.56■■□□□ 1.68
CCS-205ENST00000530384 CHGAP10645 457 aaKnown RBP25.52■■□□□ 1.68
CCS-205ENST00000530384 HDGFP51858 240 aaKnown RBP25.52■■□□□ 1.68
CCS-205ENST00000530384 ACIN1Q9UKV3 1341 aaKnown RBP25.52■■□□□ 1.68
CCS-205ENST00000530384 SLC4A1APQ9BWU0 796 aaKnown RBP25.51■■□□□ 1.67
CCS-205ENST00000530384 CPS1P31327 1500 aa25.51■■□□□ 1.67
CCS-205ENST00000530384 ZFYVE9O95405 1425 aa25.49■■□□□ 1.67
CCS-205ENST00000530384 SETD5Q9C0A6 1442 aa25.49■■□□□ 1.67
CCS-205ENST00000530384 TRPM2O94759 1503 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms